RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 TSPY4P0CV99 314 aa24.2■■□□□ 1.46
SOD1-201ENST00000270142 TSPY10P0CW01 314 aa24.2■■□□□ 1.46
SOD1-201ENST00000270142 TCOF1Q13428 1488 aaKnown RBP24.19■■□□□ 1.46
SOD1-201ENST00000270142 FAM135AQ9P2D6 1515 aa24.19■■□□□ 1.46
SOD1-201ENST00000270142 A2ML1A8K2U0 1454 aa24.18■■□□□ 1.46
SOD1-201ENST00000270142 PKD2Q13563 968 aa24.17■■□□□ 1.46
SOD1-201ENST00000270142 PZPP20742 1482 aa24.17■■□□□ 1.46
SOD1-201ENST00000270142 FBXO31Q5XUX0 539 aaPredicted RBP24.16■■□□□ 1.46
SOD1-201ENST00000270142 MAST1Q9Y2H9 1570 aa24.16■■□□□ 1.46
SOD1-201ENST00000270142 WASHC2CQ9Y4E1 1318 aa24.15■■□□□ 1.46
SOD1-201ENST00000270142 DNMT1P26358 1616 aaKnown RBP24.15■■□□□ 1.46
SOD1-201ENST00000270142 TNRQ92752 1358 aa24.15■■□□□ 1.46
SOD1-201ENST00000270142 MYOM3Q5VTT5 1437 aa24.14■■□□□ 1.45
SOD1-201ENST00000270142 IQSEC2Q5JU85 1478 aa24.13■■□□□ 1.45
SOD1-201ENST00000270142 ZNF335Q9H4Z2 1342 aaPredicted RBP24.13■■□□□ 1.45
SOD1-201ENST00000270142 MIA2Q96PC5 1412 aa24.13■■□□□ 1.45
SOD1-201ENST00000270142 RNF17Q9BXT8 1623 aaKnown RBP24.09■■□□□ 1.45
SOD1-201ENST00000270142 ABCC3O15438 1527 aa24.05■■□□□ 1.44
SOD1-201ENST00000270142 EIF2AK4Q9P2K8 1649 aaKnown RBP24.05■■□□□ 1.44
SOD1-201ENST00000270142 NEURL4Q96JN8 1562 aa24.03■■□□□ 1.44
SOD1-201ENST00000270142 NLRP1Q9C000 1473 aa24.03■■□□□ 1.44
SOD1-201ENST00000270142 MROH1Q8NDA8 1641 aa24.02■■□□□ 1.44
SOD1-201ENST00000270142 ZC3H13Q5T200 1668 aaKnown RBP24.02■■□□□ 1.44
SOD1-201ENST00000270142 POLR1AO95602 1720 aaPredicted RBP24.01■■□□□ 1.43
SOD1-201ENST00000270142 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.01■■□□□ 1.432e-18■■□□□ 12.5
SOD1-201ENST00000270142 DUOX2Q9NRD8 1548 aa24■■□□□ 1.43
SOD1-201ENST00000270142 SPATA31D1Q6ZQQ2 1576 aa23.99■■□□□ 1.43
SOD1-201ENST00000270142 UGGT1Q9NYU2 1555 aa23.99■■□□□ 1.43
SOD1-201ENST00000270142 APLP2Q06481 763 aa23.99■■□□□ 1.43
SOD1-201ENST00000270142 ABCC5O15440 1437 aa23.99■■□□□ 1.43
SOD1-201ENST00000270142 PTPN23Q9H3S7 1636 aa23.99■■□□□ 1.43
SOD1-201ENST00000270142 SHANK2Q9UPX8 1470 aa23.98■■□□□ 1.43
SOD1-201ENST00000270142 ERVK-7P63135 1459 aa23.97■■□□□ 1.43
SOD1-201ENST00000270142 CROCC2H7BZ55 1655 aa23.96■■□□□ 1.43
SOD1-201ENST00000270142 KIF15Q9NS87 1388 aa23.96■■□□□ 1.43
SOD1-201ENST00000270142 ANKLE2Q86XL3 938 aa23.96■■□□□ 1.43
SOD1-201ENST00000270142 THEMISQ8N1K5 641 aaPredicted RBP23.96■■□□□ 1.43
SOD1-201ENST00000270142 CEP152O94986 1710 aa23.95■■□□□ 1.42
SOD1-201ENST00000270142 UBAP1LF5GYI3 381 aa23.94■■□□□ 1.42
SOD1-201ENST00000270142 DAPK1P53355 1430 aa23.93■■□□□ 1.42
SOD1-201ENST00000270142 FGD6Q6ZV73 1430 aa23.93■■□□□ 1.42
SOD1-201ENST00000270142 DISP3Q9P2K9 1392 aa23.93■■□□□ 1.42
SOD1-201ENST00000270142 ERBINQ96RT1 1412 aa23.93■■□□□ 1.42
SOD1-201ENST00000270142 RRP7BPQ9NSQ0 103 aa23.92■■□□□ 1.42
SOD1-201ENST00000270142 PRDM15P57071 1507 aaPredicted RBP23.91■■□□□ 1.42
SOD1-201ENST00000270142 MED14O60244 1454 aa23.91■■□□□ 1.42
SOD1-201ENST00000270142 NPHP4O75161 1426 aaPredicted RBP23.91■■□□□ 1.42
SOD1-201ENST00000270142 DEPDC5O75140 1603 aa23.91■■□□□ 1.42
SOD1-201ENST00000270142 CPS1P31327 1500 aa23.89■■□□□ 1.42
SOD1-201ENST00000270142 VWDEQ8N2E2 1590 aa23.89■■□□□ 1.41
SOD1-201ENST00000270142 ARHGAP31Q2M1Z3 1444 aa23.85■■□□□ 1.41
SOD1-201ENST00000270142 IQGAP1P46940 1657 aa23.85■■□□□ 1.41
SOD1-201ENST00000270142 CHIC2Q9UKJ5 165 aa23.84■■□□□ 1.41
SOD1-201ENST00000270142 ILDR2Q71H61 639 aa23.83■■□□□ 1.41
SOD1-201ENST00000270142 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.83■■□□□ 1.415e-11■■□□□ 14
SOD1-201ENST00000270142 UBR1Q8IWV7 1749 aa23.83■■□□□ 1.41
SOD1-201ENST00000270142 ANKRD30AQ9BXX3 1397 aa23.82■■□□□ 1.4
SOD1-201ENST00000270142 CFAP65Q6ZU64 1925 aaKnown RBP23.82■■□□□ 1.4
SOD1-201ENST00000270142 KANK1Q14678 1352 aa23.78■■□□□ 1.4
SOD1-201ENST00000270142 SCAF11Q99590 1463 aaKnown RBP23.77■■□□□ 1.4
SOD1-201ENST00000270142 ARHGAP23Q9P227 1491 aa23.77■■□□□ 1.4
SOD1-201ENST00000270142 LMTK2Q8IWU2 1503 aa23.77■■□□□ 1.4
SOD1-201ENST00000270142 SLIT1O75093 1534 aa23.76■■□□□ 1.39
SOD1-201ENST00000270142 TOM1O60784 492 aa23.76■■□□□ 1.39
SOD1-201ENST00000270142 PIP4K2BP78356 416 aa23.76■■□□□ 1.39
SOD1-201ENST00000270142 SCAF1Q9H7N4 1312 aaKnown RBP23.76■■□□□ 1.39
SOD1-201ENST00000270142 ADGRL2O95490 1459 aa23.75■■□□□ 1.39
SOD1-201ENST00000270142 STRCP1A6NGW2 1772 aa23.74■■□□□ 1.39
SOD1-201ENST00000270142 LTKP29376 864 aa23.74■■□□□ 1.39
SOD1-201ENST00000270142 PIK3C2BO00750 1634 aa23.73■■□□□ 1.39
SOD1-201ENST00000270142 FAM50AQ14320 339 aaKnown RBP23.72■■□□□ 1.39
SOD1-201ENST00000270142 TXNDC2Q86VQ3 553 aa23.72■■□□□ 1.39
SOD1-201ENST00000270142 ALKQ9UM73 1620 aa23.72■■□□□ 1.39
SOD1-201ENST00000270142 LRRC7Q96NW7 1537 aa23.71■■□□□ 1.39
SOD1-201ENST00000270142 HSPA1LP34931 641 aa23.71■■□□□ 1.39
SOD1-201ENST00000270142 SYNMO15061 1565 aa23.69■■□□□ 1.38
SOD1-201ENST00000270142 EFCAB6Q5THR3 1501 aa23.69■■□□□ 1.38
SOD1-201ENST00000270142 TMEM2Q9UHN6 1383 aa23.68■■□□□ 1.38
SOD1-201ENST00000270142 NOS1P29475 1434 aa23.67■■□□□ 1.38
SOD1-201ENST00000270142 IDI1Q13907 227 aa23.66■■□□□ 1.38
SOD1-201ENST00000270142 STAG3Q9UJ98 1225 aa23.66■■□□□ 1.38
SOD1-201ENST00000270142 EID1Q9Y6B2 187 aa23.66■■□□□ 1.38
SOD1-201ENST00000270142 ANKRD50Q9ULJ7 1429 aa23.66■■□□□ 1.38
SOD1-201ENST00000270142 SOCS7O14512 581 aa23.64■■□□□ 1.37
SOD1-201ENST00000270142 KDM5AP29375 1690 aaKnown RBP23.64■■□□□ 1.37
SOD1-201ENST00000270142 ADGRB3O60242 1522 aa23.6■■□□□ 1.37
SOD1-201ENST00000270142 MED1Q15648 1581 aaPredicted RBP23.58■■□□□ 1.37
SOD1-201ENST00000270142 RPRD2Q5VT52 1461 aaKnown RBP23.58■■□□□ 1.37
SOD1-201ENST00000270142 SLC52A1Q9NWF4 448 aa23.57■■□□□ 1.36
SOD1-201ENST00000270142 TET3O43151 1660 aa23.55■■□□□ 1.36
SOD1-201ENST00000270142 UNC13BO14795 1591 aa23.54■■□□□ 1.36
SOD1-201ENST00000270142 XIRP1Q702N8 1843 aaKnown RBP23.54■■□□□ 1.36
SOD1-201ENST00000270142 SENP3Q9H4L4 574 aaPredicted RBP23.53■■□□□ 1.36
SOD1-201ENST00000270142 SLC26A8Q96RN1 970 aa23.52■■□□□ 1.36
SOD1-201ENST00000270142 ROCK1Q13464 1354 aa23.52■■□□□ 1.36
SOD1-201ENST00000270142 GCC2Q8IWJ2 1684 aa23.5■■□□□ 1.35
SOD1-201ENST00000270142 KCNA6P17658 529 aa23.49■■□□□ 1.35
SOD1-201ENST00000270142 TMEM94Q12767 1356 aa23.48■■□□□ 1.35
SOD1-201ENST00000270142 ZFYVE9O95405 1425 aa23.48■■□□□ 1.35
SOD1-201ENST00000270142 TMEM131LA2VDJ0 1609 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms