RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 APLP2Q06481 763 aa27.52■■■□□ 2
CSNK1D-201ENST00000269361 MYO3AQ8NEV4 1616 aa27.52■■■□□ 2
CSNK1D-201ENST00000269361 PKD2Q13563 968 aa27.51■■□□□ 1.99
CSNK1D-201ENST00000269361 CEP170BQ9Y4F5 1589 aaPredicted RBP27.51■■□□□ 1.99
CSNK1D-201ENST00000269361 KDM5DQ9BY66 1539 aa27.5■■□□□ 1.99
CSNK1D-201ENST00000269361 PLA2R1Q13018 1463 aa27.5■■□□□ 1.99
CSNK1D-201ENST00000269361 FAM135AQ9P2D6 1515 aa27.49■■□□□ 1.99
CSNK1D-201ENST00000269361 TNRQ92752 1358 aa27.48■■□□□ 1.99
CSNK1D-201ENST00000269361 ZNF142P52746 1687 aaPredicted RBP27.47■■□□□ 1.99
CSNK1D-201ENST00000269361 A2ML1A8K2U0 1454 aa27.47■■□□□ 1.99
CSNK1D-201ENST00000269361 PZPP20742 1482 aa27.47■■□□□ 1.99
CSNK1D-201ENST00000269361 MAST1Q9Y2H9 1570 aa27.47■■□□□ 1.99
CSNK1D-201ENST00000269361 LTBP4Q8N2S1 1624 aa27.46■■□□□ 1.99
CSNK1D-201ENST00000269361 TCOF1Q13428 1488 aaKnown RBP27.45■■□□□ 1.99
CSNK1D-201ENST00000269361 ZNF335Q9H4Z2 1342 aaPredicted RBP27.4■■□□□ 1.98
CSNK1D-201ENST00000269361 DNMT1P26358 1616 aaKnown RBP27.38■■□□□ 1.97
CSNK1D-201ENST00000269361 ABCC5O15440 1437 aa27.36■■□□□ 1.97
CSNK1D-201ENST00000269361 RNF17Q9BXT8 1623 aaKnown RBP27.35■■□□□ 1.97
CSNK1D-201ENST00000269361 IQSEC2Q5JU85 1478 aa27.35■■□□□ 1.97
CSNK1D-201ENST00000269361 THEMISQ8N1K5 641 aaPredicted RBP27.34■■□□□ 1.97
CSNK1D-201ENST00000269361 ABCC3O15438 1527 aa27.34■■□□□ 1.97
CSNK1D-201ENST00000269361 NLRP1Q9C000 1473 aa27.33■■□□□ 1.97
CSNK1D-201ENST00000269361 DUOX2Q9NRD8 1548 aa27.33■■□□□ 1.97
CSNK1D-201ENST00000269361 RRP7BPQ9NSQ0 103 aa27.33■■□□□ 1.97
CSNK1D-201ENST00000269361 KIF15Q9NS87 1388 aa27.33■■□□□ 1.97
CSNK1D-201ENST00000269361 EIF2AK4Q9P2K8 1649 aaKnown RBP27.32■■□□□ 1.96
CSNK1D-201ENST00000269361 FGD6Q6ZV73 1430 aa27.32■■□□□ 1.96
CSNK1D-201ENST00000269361 ANKLE2Q86XL3 938 aa27.31■■□□□ 1.96
CSNK1D-201ENST00000269361 SHANK2Q9UPX8 1470 aa27.31■■□□□ 1.96
CSNK1D-201ENST00000269361 PTPN23Q9H3S7 1636 aa27.3■■□□□ 1.96
CSNK1D-201ENST00000269361 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.3■■□□□ 1.965e-16■■■■■ 33.2
CSNK1D-201ENST00000269361 DAPK1P53355 1430 aa27.28■■□□□ 1.96
CSNK1D-201ENST00000269361 MROH1Q8NDA8 1641 aa27.27■■□□□ 1.96
CSNK1D-201ENST00000269361 UGGT1Q9NYU2 1555 aa27.26■■□□□ 1.95
CSNK1D-201ENST00000269361 ERBINQ96RT1 1412 aa27.25■■□□□ 1.95
CSNK1D-201ENST00000269361 ZC3H13Q5T200 1668 aaKnown RBP27.25■■□□□ 1.95
CSNK1D-201ENST00000269361 ERVK-7P63135 1459 aa27.24■■□□□ 1.95
CSNK1D-201ENST00000269361 SPATA31D1Q6ZQQ2 1576 aa27.23■■□□□ 1.95
CSNK1D-201ENST00000269361 CHIC2Q9UKJ5 165 aa27.23■■□□□ 1.95
CSNK1D-201ENST00000269361 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.22■■□□□ 1.956e-7■□□□□ 9.8
CSNK1D-201ENST00000269361 NEURL4Q96JN8 1562 aa27.22■■□□□ 1.95
CSNK1D-201ENST00000269361 UBAP1LF5GYI3 381 aa27.21■■□□□ 1.95
CSNK1D-201ENST00000269361 ANKRD30AQ9BXX3 1397 aa27.21■■□□□ 1.95
CSNK1D-201ENST00000269361 CROCC2H7BZ55 1655 aa27.2■■□□□ 1.94
CSNK1D-201ENST00000269361 NPHP4O75161 1426 aaPredicted RBP27.17■■□□□ 1.94
CSNK1D-201ENST00000269361 ARHGAP31Q2M1Z3 1444 aa27.17■■□□□ 1.94
CSNK1D-201ENST00000269361 PRDM15P57071 1507 aaPredicted RBP27.17■■□□□ 1.94
CSNK1D-201ENST00000269361 MED14O60244 1454 aa27.17■■□□□ 1.94
CSNK1D-201ENST00000269361 POLR1AO95602 1720 aaPredicted RBP27.16■■□□□ 1.94
CSNK1D-201ENST00000269361 KANK1Q14678 1352 aa27.15■■□□□ 1.94
CSNK1D-201ENST00000269361 FAM50AQ14320 339 aaKnown RBP27.14■■□□□ 1.94
CSNK1D-201ENST00000269361 CEP152O94986 1710 aa27.13■■□□□ 1.93
CSNK1D-201ENST00000269361 DEPDC5O75140 1603 aa27.12■■□□□ 1.93
CSNK1D-201ENST00000269361 CPS1P31327 1500 aa27.11■■□□□ 1.93
CSNK1D-201ENST00000269361 VWDEQ8N2E2 1590 aa27.08■■□□□ 1.93
CSNK1D-201ENST00000269361 DISP3Q9P2K9 1392 aa27.08■■□□□ 1.93
CSNK1D-201ENST00000269361 ADGRL2O95490 1459 aa27.06■■□□□ 1.92
CSNK1D-201ENST00000269361 LTKP29376 864 aa27.04■■□□□ 1.92
CSNK1D-201ENST00000269361 TXNDC2Q86VQ3 553 aa27.04■■□□□ 1.92
CSNK1D-201ENST00000269361 LMTK2Q8IWU2 1503 aa27.04■■□□□ 1.92
CSNK1D-201ENST00000269361 TOM1O60784 492 aa27.03■■□□□ 1.92
CSNK1D-201ENST00000269361 IQGAP1P46940 1657 aa27.02■■□□□ 1.92
CSNK1D-201ENST00000269361 SCAF11Q99590 1463 aaKnown RBP27.02■■□□□ 1.92
CSNK1D-201ENST00000269361 UBR1Q8IWV7 1749 aa27.02■■□□□ 1.92
CSNK1D-201ENST00000269361 ARHGAP23Q9P227 1491 aa27.01■■□□□ 1.91
CSNK1D-201ENST00000269361 IDI1Q13907 227 aa27■■□□□ 1.91
CSNK1D-201ENST00000269361 STAG3Q9UJ98 1225 aa27■■□□□ 1.91
CSNK1D-201ENST00000269361 EID1Q9Y6B2 187 aa27■■□□□ 1.91
CSNK1D-201ENST00000269361 SLIT1O75093 1534 aa27■■□□□ 1.91
CSNK1D-201ENST00000269361 ANKRD50Q9ULJ7 1429 aa26.99■■□□□ 1.91
CSNK1D-201ENST00000269361 CFAP65Q6ZU64 1925 aaKnown RBP26.99■■□□□ 1.91
CSNK1D-201ENST00000269361 PIP4K2BP78356 416 aa26.99■■□□□ 1.91
CSNK1D-201ENST00000269361 SCAF1Q9H7N4 1312 aaKnown RBP26.98■■□□□ 1.91
CSNK1D-201ENST00000269361 TMEM2Q9UHN6 1383 aa26.97■■□□□ 1.91
CSNK1D-201ENST00000269361 NOS1P29475 1434 aa26.94■■□□□ 1.9
CSNK1D-201ENST00000269361 ILDR2Q71H61 639 aa26.93■■□□□ 1.9
CSNK1D-201ENST00000269361 PIK3C2BO00750 1634 aa26.93■■□□□ 1.9
CSNK1D-201ENST00000269361 EFCAB6Q5THR3 1501 aa26.92■■□□□ 1.9
CSNK1D-201ENST00000269361 HSPA1LP34931 641 aa26.92■■□□□ 1.9
CSNK1D-201ENST00000269361 SLC52A1Q9NWF4 448 aa26.92■■□□□ 1.9
CSNK1D-201ENST00000269361 LRRC7Q96NW7 1537 aa26.91■■□□□ 1.9
CSNK1D-201ENST00000269361 SYNMO15061 1565 aa26.89■■□□□ 1.9
CSNK1D-201ENST00000269361 ROCK1Q13464 1354 aa26.87■■□□□ 1.89
CSNK1D-201ENST00000269361 PPARGC1BQ86YN6 1023 aaKnown RBP26.87■■□□□ 1.89
CSNK1D-201ENST00000269361 RPRD2Q5VT52 1461 aaKnown RBP26.87■■□□□ 1.89
CSNK1D-201ENST00000269361 STRCP1A6NGW2 1772 aa26.86■■□□□ 1.89
CSNK1D-201ENST00000269361 KDM5AP29375 1690 aaKnown RBP26.84■■□□□ 1.89
CSNK1D-201ENST00000269361 ALKQ9UM73 1620 aa26.83■■□□□ 1.88
CSNK1D-201ENST00000269361 ITGAEP38570 1179 aa26.82■■□□□ 1.88
CSNK1D-201ENST00000269361 ADGRB3O60242 1522 aa26.8■■□□□ 1.88
CSNK1D-201ENST00000269361 SLC26A8Q96RN1 970 aa26.8■■□□□ 1.88
CSNK1D-201ENST00000269361 TET3O43151 1660 aa26.77■■□□□ 1.88
CSNK1D-201ENST00000269361 KCNA6P17658 529 aa26.77■■□□□ 1.88
CSNK1D-201ENST00000269361 UNC13BO14795 1591 aa26.76■■□□□ 1.87
CSNK1D-201ENST00000269361 SOCS7O14512 581 aa26.75■■□□□ 1.87
CSNK1D-201ENST00000269361 BCANQ96GW7 911 aa26.75■■□□□ 1.87
CSNK1D-201ENST00000269361 NUP155O75694 1391 aa26.73■■□□□ 1.87
CSNK1D-201ENST00000269361 HDGFP51858 240 aaKnown RBP26.73■■□□□ 1.87
CSNK1D-201ENST00000269361 ZFYVE9O95405 1425 aa26.71■■□□□ 1.87
CSNK1D-201ENST00000269361 TMEM94Q12767 1356 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms