RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 NCKAP5LQ9HCH0 1330 aa25.4■■□□□ 1.66
CLPP-201ENST00000245816 DMRT2Q9Y5R5 561 aa25.4■■□□□ 1.66
CLPP-201ENST00000245816 CEP170BQ9Y4F5 1589 aaPredicted RBP25.39■■□□□ 1.65
CLPP-201ENST00000245816 ABCC5O15440 1437 aa25.37■■□□□ 1.65
CLPP-201ENST00000245816 KDM5DQ9BY66 1539 aa25.37■■□□□ 1.65
CLPP-201ENST00000245816 LTBP4Q8N2S1 1624 aa25.37■■□□□ 1.65
CLPP-201ENST00000245816 MROH1Q8NDA8 1641 aa25.37■■□□□ 1.65
CLPP-201ENST00000245816 PZPP20742 1482 aa25.34■■□□□ 1.65
CLPP-201ENST00000245816 RNF17Q9BXT8 1623 aaKnown RBP25.34■■□□□ 1.65
CLPP-201ENST00000245816 PTPN23Q9H3S7 1636 aa25.34■■□□□ 1.65
CLPP-201ENST00000245816 WASHC2CQ9Y4E1 1318 aa25.34■■□□□ 1.65
CLPP-201ENST00000245816 TCOF1Q13428 1488 aaKnown RBP25.34■■□□□ 1.65
CLPP-201ENST00000245816 DNMT1P26358 1616 aaKnown RBP25.33■■□□□ 1.65
CLPP-201ENST00000245816 A2ML1A8K2U0 1454 aa25.32■■□□□ 1.64
CLPP-201ENST00000245816 FGD6Q6ZV73 1430 aa25.31■■□□□ 1.64
CLPP-201ENST00000245816 FAM135AQ9P2D6 1515 aa25.31■■□□□ 1.64
CLPP-201ENST00000245816 TNRQ92752 1358 aa25.31■■□□□ 1.64
CLPP-201ENST00000245816 PLA2R1Q13018 1463 aa25.3■■□□□ 1.64
CLPP-201ENST00000245816 ABCC3O15438 1527 aa25.3■■□□□ 1.64
CLPP-201ENST00000245816 CROCC2H7BZ55 1655 aa25.29■■□□□ 1.64
CLPP-201ENST00000245816 DAPK1P53355 1430 aa25.28■■□□□ 1.64
CLPP-201ENST00000245816 EIF2AK4Q9P2K8 1649 aaKnown RBP25.27■■□□□ 1.64
CLPP-201ENST00000245816 APLP2Q06481 763 aa25.27■■□□□ 1.64
CLPP-201ENST00000245816 RRP7BPQ9NSQ0 103 aa25.25■■□□□ 1.63
CLPP-201ENST00000245816 ZNF335Q9H4Z2 1342 aaPredicted RBP25.25■■□□□ 1.63
CLPP-201ENST00000245816 SHANK2Q9UPX8 1470 aa25.25■■□□□ 1.63
CLPP-201ENST00000245816 DUOX2Q9NRD8 1548 aa25.25■■□□□ 1.63
CLPP-201ENST00000245816 KIF15Q9NS87 1388 aa25.24■■□□□ 1.63
CLPP-201ENST00000245816 PKD2Q13563 968 aa25.23■■□□□ 1.63
CLPP-201ENST00000245816 NEURL4Q96JN8 1562 aa25.22■■□□□ 1.63
CLPP-201ENST00000245816 CEP152O94986 1710 aa25.22■■□□□ 1.63
CLPP-201ENST00000245816 SPATA31D1Q6ZQQ2 1576 aa25.2■■□□□ 1.62
CLPP-201ENST00000245816 CHIC2Q9UKJ5 165 aa25.2■■□□□ 1.62
CLPP-201ENST00000245816 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.18■■□□□ 1.62
CLPP-201ENST00000245816 ZC3H13Q5T200 1668 aaKnown RBP25.18■■□□□ 1.62
CLPP-201ENST00000245816 ERVK-7P63135 1459 aa25.18■■□□□ 1.62
CLPP-201ENST00000245816 ERBINQ96RT1 1412 aa25.16■■□□□ 1.62
CLPP-201ENST00000245816 PRDM15P57071 1507 aaPredicted RBP25.16■■□□□ 1.62
CLPP-201ENST00000245816 NLRP1Q9C000 1473 aa25.15■■□□□ 1.62
CLPP-201ENST00000245816 DEPDC5O75140 1603 aa25.14■■□□□ 1.61
CLPP-201ENST00000245816 CFAP65Q6ZU64 1925 aaKnown RBP25.14■■□□□ 1.61
CLPP-201ENST00000245816 UGGT1Q9NYU2 1555 aa25.13■■□□□ 1.61
CLPP-201ENST00000245816 POLR1AO95602 1720 aaPredicted RBP25.12■■□□□ 1.61
CLPP-201ENST00000245816 ARHGAP31Q2M1Z3 1444 aa25.1■■□□□ 1.61
CLPP-201ENST00000245816 VWDEQ8N2E2 1590 aa25.1■■□□□ 1.61
CLPP-201ENST00000245816 ADGRL2O95490 1459 aa25.09■■□□□ 1.61
CLPP-201ENST00000245816 IQSEC2Q5JU85 1478 aa25.09■■□□□ 1.61
CLPP-201ENST00000245816 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.09■■□□□ 1.61
CLPP-201ENST00000245816 THEMISQ8N1K5 641 aaPredicted RBP25.08■■□□□ 1.61
CLPP-201ENST00000245816 ANKRD30AQ9BXX3 1397 aa25.07■■□□□ 1.6
CLPP-201ENST00000245816 MED14O60244 1454 aa25.07■■□□□ 1.6
CLPP-201ENST00000245816 FAM50AQ14320 339 aaKnown RBP25.06■■□□□ 1.6
CLPP-201ENST00000245816 ANKLE2Q86XL3 938 aa25.05■■□□□ 1.6
CLPP-201ENST00000245816 UBR1Q8IWV7 1749 aa25.04■■□□□ 1.6
CLPP-201ENST00000245816 LMTK2Q8IWU2 1503 aa25.03■■□□□ 1.6
CLPP-201ENST00000245816 NPHP4O75161 1426 aaPredicted RBP25.03■■□□□ 1.6
CLPP-201ENST00000245816 PPARGC1BQ86YN6 1023 aaKnown RBP25.02■■□□□ 1.6
CLPP-201ENST00000245816 LTKP29376 864 aa25■■□□□ 1.59
CLPP-201ENST00000245816 ARHGAP23Q9P227 1491 aa24.98■■□□□ 1.59
CLPP-201ENST00000245816 STRCP1A6NGW2 1772 aa24.98■■□□□ 1.59
CLPP-201ENST00000245816 SYNMO15061 1565 aa24.97■■□□□ 1.59
CLPP-201ENST00000245816 PIK3C2BO00750 1634 aa24.96■■□□□ 1.59
CLPP-201ENST00000245816 IQGAP1P46940 1657 aa24.95■■□□□ 1.58
CLPP-201ENST00000245816 ANKRD50Q9ULJ7 1429 aa24.95■■□□□ 1.58
CLPP-201ENST00000245816 IDI1Q13907 227 aa24.94■■□□□ 1.58
CLPP-201ENST00000245816 SLIT1O75093 1534 aa24.94■■□□□ 1.58
CLPP-201ENST00000245816 NOS1P29475 1434 aa24.94■■□□□ 1.58
CLPP-201ENST00000245816 UBAP1LF5GYI3 381 aa24.93■■□□□ 1.58
CLPP-201ENST00000245816 ALKQ9UM73 1620 aa24.93■■□□□ 1.58
CLPP-201ENST00000245816 KANK1Q14678 1352 aa24.93■■□□□ 1.58
CLPP-201ENST00000245816 EFCAB6Q5THR3 1501 aa24.92■■□□□ 1.58
CLPP-201ENST00000245816 CPS1P31327 1500 aa24.91■■□□□ 1.58
CLPP-201ENST00000245816 SCAF11Q99590 1463 aaKnown RBP24.89■■□□□ 1.58
CLPP-201ENST00000245816 TXNDC2Q86VQ3 553 aa24.88■■□□□ 1.57
CLPP-201ENST00000245816 TMEM2Q9UHN6 1383 aa24.86■■□□□ 1.57
CLPP-201ENST00000245816 ROCK1Q13464 1354 aa24.84■■□□□ 1.57
CLPP-201ENST00000245816 LRRC7Q96NW7 1537 aa24.84■■□□□ 1.57
CLPP-201ENST00000245816 UNC13BO14795 1591 aa24.84■■□□□ 1.57
CLPP-201ENST00000245816 KDM5AP29375 1690 aaKnown RBP24.81■■□□□ 1.56
CLPP-201ENST00000245816 ITGAEP38570 1179 aa24.8■■□□□ 1.56
CLPP-201ENST00000245816 TET3O43151 1660 aa24.8■■□□□ 1.56
CLPP-201ENST00000245816 ILDR2Q71H61 639 aa24.79■■□□□ 1.56
CLPP-201ENST00000245816 ADGRB3O60242 1522 aa24.78■■□□□ 1.56
CLPP-201ENST00000245816 RPRD2Q5VT52 1461 aaKnown RBP24.77■■□□□ 1.56
CLPP-201ENST00000245816 E9PCH4 1651 aa24.76■■□□□ 1.55
CLPP-201ENST00000245816 PIP4K2BP78356 416 aa24.76■■□□□ 1.55
CLPP-201ENST00000245816 XIRP1Q702N8 1843 aaKnown RBP24.75■■□□□ 1.55
CLPP-201ENST00000245816 HSPA1LP34931 641 aa24.75■■□□□ 1.55
CLPP-201ENST00000245816 MYO5BQ9ULV0 1848 aa24.75■■□□□ 1.55
CLPP-201ENST00000245816 SLC52A1Q9NWF4 448 aa24.74■■□□□ 1.55
CLPP-201ENST00000245816 DISP3Q9P2K9 1392 aa24.74■■□□□ 1.55
CLPP-201ENST00000245816 GCC2Q8IWJ2 1684 aa24.74■■□□□ 1.55
CLPP-201ENST00000245816 IQGAP3Q86VI3 1631 aa24.73■■□□□ 1.55
CLPP-201ENST00000245816 STAG3Q9UJ98 1225 aa24.73■■□□□ 1.55
CLPP-201ENST00000245816 EID1Q9Y6B2 187 aa24.73■■□□□ 1.55
CLPP-201ENST00000245816 ZFYVE9O95405 1425 aa24.72■■□□□ 1.55
CLPP-201ENST00000245816 TMEM131LA2VDJ0 1609 aa24.72■■□□□ 1.55
CLPP-201ENST00000245816 RRBP1Q9P2E9 1410 aaKnown RBP24.71■■□□□ 1.55
CLPP-201ENST00000245816 TOM1O60784 492 aa24.71■■□□□ 1.55
CLPP-201ENST00000245816 SLC26A8Q96RN1 970 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms