RNA–Protein interactions for RNA: ENST00000228140.6

RPS13-201, Transcript of ribosomal protein S13, humanhuman

TSL 2 BASIC

Gene RPS13, Length 491 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS13-201ENST00000228140 RNF17Q9BXT8 1623 aaKnown RBP16.43■□□□□ 0.22
RPS13-201ENST00000228140 CEP170BQ9Y4F5 1589 aaPredicted RBP16.43■□□□□ 0.22
RPS13-201ENST00000228140 PTPN23Q9H3S7 1636 aa16.42■□□□□ 0.22
RPS13-201ENST00000228140 PTPRKQ15262 1439 aa16.42■□□□□ 0.22
RPS13-201ENST00000228140 CAMSAP1Q5T5Y3 1602 aa16.41■□□□□ 0.22
RPS13-201ENST00000228140 PTPRTO14522 1441 aa16.4■□□□□ 0.22
RPS13-201ENST00000228140 NCOA1Q15788 1441 aa16.4■□□□□ 0.22
RPS13-201ENST00000228140 KIF3BO15066 747 aa16.4■□□□□ 0.22
RPS13-201ENST00000228140 SHANK2Q9UPX8 1470 aa16.4■□□□□ 0.22
RPS13-201ENST00000228140 DNMT1P26358 1616 aaKnown RBP16.38■□□□□ 0.21
RPS13-201ENST00000228140 DUOX2Q9NRD8 1548 aa16.38■□□□□ 0.21
RPS13-201ENST00000228140 PZPP20742 1482 aa16.37■□□□□ 0.21
RPS13-201ENST00000228140 PLA2R1Q13018 1463 aa16.37■□□□□ 0.21
RPS13-201ENST00000228140 WASHC2CQ9Y4E1 1318 aa16.36■□□□□ 0.21
RPS13-201ENST00000228140 POLR1AO95602 1720 aaPredicted RBP16.36■□□□□ 0.21
RPS13-201ENST00000228140 A2ML1A8K2U0 1454 aa16.35■□□□□ 0.21
RPS13-201ENST00000228140 FGD6Q6ZV73 1430 aa16.35■□□□□ 0.21
RPS13-201ENST00000228140 TCOF1Q13428 1488 aaKnown RBP16.35■□□□□ 0.21
RPS13-201ENST00000228140 CERKQ8TCT0 537 aa16.34■□□□□ 0.21
RPS13-201ENST00000228140 CEP152O94986 1710 aa16.33■□□□□ 0.21
RPS13-201ENST00000228140 ABCC3O15438 1527 aa16.33■□□□□ 0.2
RPS13-201ENST00000228140 MROH1Q8NDA8 1641 aa16.32■□□□□ 0.2
RPS13-201ENST00000228140 TNRQ92752 1358 aa16.32■□□□□ 0.2
RPS13-201ENST00000228140 ERBINQ96RT1 1412 aa16.32■□□□□ 0.2
RPS13-201ENST00000228140 DAPK1P53355 1430 aa16.31■□□□□ 0.2
RPS13-201ENST00000228140 PRDM15P57071 1507 aaPredicted RBP16.3■□□□□ 0.2
RPS13-201ENST00000228140 NLRP1Q9C000 1473 aa16.3■□□□□ 0.2
RPS13-201ENST00000228140 ABCC5O15440 1437 aa16.3■□□□□ 0.2
RPS13-201ENST00000228140 KIF15Q9NS87 1388 aa16.3■□□□□ 0.2
RPS13-201ENST00000228140 PKD2Q13563 968 aa16.3■□□□□ 0.2
RPS13-201ENST00000228140 DEPDC5O75140 1603 aa16.3■□□□□ 0.2
RPS13-201ENST00000228140 IQSEC2Q5JU85 1478 aa16.29■□□□□ 0.2
RPS13-201ENST00000228140 SPATA31D1Q6ZQQ2 1576 aa16.28■□□□□ 0.2
RPS13-201ENST00000228140 LTBP4Q8N2S1 1624 aa16.27■□□□□ 0.2
RPS13-201ENST00000228140 UGGT1Q9NYU2 1555 aa16.26■□□□□ 0.19
RPS13-201ENST00000228140 ANKRD30AQ9BXX3 1397 aa16.26■□□□□ 0.19
RPS13-201ENST00000228140 CFAP65Q6ZU64 1925 aaKnown RBP16.25■□□□□ 0.19
RPS13-201ENST00000228140 NCKAP5LQ9HCH0 1330 aa16.24■□□□□ 0.19
RPS13-201ENST00000228140 FBXO31Q5XUX0 539 aaPredicted RBP16.24■□□□□ 0.19
RPS13-201ENST00000228140 ERVK-7P63135 1459 aa16.23■□□□□ 0.19
RPS13-201ENST00000228140 ADGRL2O95490 1459 aa16.22■□□□□ 0.19
RPS13-201ENST00000228140 NEURL4Q96JN8 1562 aa16.22■□□□□ 0.19
RPS13-201ENST00000228140 KANK1Q14678 1352 aa16.22■□□□□ 0.19
RPS13-201ENST00000228140 ARHGAP31Q2M1Z3 1444 aa16.21■□□□□ 0.19
RPS13-201ENST00000228140 THEMISQ8N1K5 641 aaPredicted RBP16.21■□□□□ 0.19
RPS13-201ENST00000228140 RRP7BPQ9NSQ0 103 aa16.21■□□□□ 0.19
RPS13-201ENST00000228140 UBR1Q8IWV7 1749 aa16.21■□□□□ 0.19
RPS13-201ENST00000228140 LMTK2Q8IWU2 1503 aa16.19■□□□□ 0.18
RPS13-201ENST00000228140 IQGAP1P46940 1657 aa16.18■□□□□ 0.18
RPS13-201ENST00000228140 KDM5AP29375 1690 aaKnown RBP16.18■□□□□ 0.18
RPS13-201ENST00000228140 VWDEQ8N2E2 1590 aa16.17■□□□□ 0.18
RPS13-201ENST00000228140 FAM50AQ14320 339 aaKnown RBP16.17■□□□□ 0.18
RPS13-201ENST00000228140 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.16■□□□□ 0.181e-60■■□□□ 12.8
RPS13-201ENST00000228140 ANKLE2Q86XL3 938 aa16.16■□□□□ 0.18
RPS13-201ENST00000228140 CHIC2Q9UKJ5 165 aa16.16■□□□□ 0.18
RPS13-201ENST00000228140 MED14O60244 1454 aa16.16■□□□□ 0.18
RPS13-201ENST00000228140 CPS1P31327 1500 aa16.15■□□□□ 0.18
RPS13-201ENST00000228140 EFCAB6Q5THR3 1501 aa16.15■□□□□ 0.18
RPS13-201ENST00000228140 ZNF335Q9H4Z2 1342 aaPredicted RBP16.15■□□□□ 0.18
RPS13-201ENST00000228140 NPHP4O75161 1426 aaPredicted RBP16.13■□□□□ 0.17
RPS13-201ENST00000228140 PIK3C2BO00750 1634 aa16.13■□□□□ 0.17
RPS13-201ENST00000228140 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.13■□□□□ 0.17
RPS13-201ENST00000228140 GCC2Q8IWJ2 1684 aa16.13■□□□□ 0.17
RPS13-201ENST00000228140 ANKRD50Q9ULJ7 1429 aa16.12■□□□□ 0.17
RPS13-201ENST00000228140 TET3O43151 1660 aa16.12■□□□□ 0.17
RPS13-201ENST00000228140 UNC13BO14795 1591 aa16.12■□□□□ 0.17
RPS13-201ENST00000228140 SLIT1O75093 1534 aa16.1■□□□□ 0.17
RPS13-201ENST00000228140 RPRD2Q5VT52 1461 aaKnown RBP16.1■□□□□ 0.17
RPS13-201ENST00000228140 SYNMO15061 1565 aa16.09■□□□□ 0.17
RPS13-201ENST00000228140 SCAF11Q99590 1463 aaKnown RBP16.09■□□□□ 0.17
RPS13-201ENST00000228140 ROCK1Q13464 1354 aa16.08■□□□□ 0.16
RPS13-201ENST00000228140 ARHGAP23Q9P227 1491 aa16.08■□□□□ 0.16
RPS13-201ENST00000228140 ADGRB3O60242 1522 aa16.06■□□□□ 0.16
RPS13-201ENST00000228140 IQGAP3Q86VI3 1631 aa16.05■□□□□ 0.16
RPS13-201ENST00000228140 NOS1P29475 1434 aa16.04■□□□□ 0.16
RPS13-201ENST00000228140 STAG3Q9UJ98 1225 aa16.04■□□□□ 0.16
RPS13-201ENST00000228140 STRCP1A6NGW2 1772 aa16.03■□□□□ 0.16
RPS13-201ENST00000228140 UBAP1LF5GYI3 381 aa16.03■□□□□ 0.16
RPS13-201ENST00000228140 EID1Q9Y6B2 187 aa16.03■□□□□ 0.16
RPS13-201ENST00000228140 E9PCH4 1651 aa16.02■□□□□ 0.15
RPS13-201ENST00000228140 TMEM2Q9UHN6 1383 aa16.01■□□□□ 0.15
RPS13-201ENST00000228140 MYO5BQ9ULV0 1848 aa16.01■□□□□ 0.15
RPS13-201ENST00000228140 SLC52A1Q9NWF4 448 aa16.01■□□□□ 0.15
RPS13-201ENST00000228140 TXNDC2Q86VQ3 553 aa16■□□□□ 0.15
RPS13-201ENST00000228140 TOM1O60784 492 aa15.98■□□□□ 0.15
RPS13-201ENST00000228140 IDI1Q13907 227 aa15.98■□□□□ 0.15
RPS13-201ENST00000228140 LRRC7Q96NW7 1537 aa15.97■□□□□ 0.15
RPS13-201ENST00000228140 LTKP29376 864 aa15.96■□□□□ 0.15
RPS13-201ENST00000228140 ITGAEP38570 1179 aa15.96■□□□□ 0.15
RPS13-201ENST00000228140 TMEM131LA2VDJ0 1609 aa15.96■□□□□ 0.15
RPS13-201ENST00000228140 RRBP1Q9P2E9 1410 aaKnown RBP15.95■□□□□ 0.14
RPS13-201ENST00000228140 SPHKAPQ2M3C7 1700 aa15.94■□□□□ 0.14
RPS13-201ENST00000228140 XIRP1Q702N8 1843 aaKnown RBP15.94■□□□□ 0.14
RPS13-201ENST00000228140 PPARGC1BQ86YN6 1023 aaKnown RBP15.94■□□□□ 0.14
RPS13-201ENST00000228140 NUP155O75694 1391 aa15.93■□□□□ 0.14
RPS13-201ENST00000228140 SCAF1Q9H7N4 1312 aaKnown RBP15.93■□□□□ 0.14
RPS13-201ENST00000228140 DISP3Q9P2K9 1392 aa15.91■□□□□ 0.14
RPS13-201ENST00000228140 HDGFP51858 240 aaKnown RBP15.91■□□□□ 0.14
RPS13-201ENST00000228140 NWD1Q149M9 1564 aa15.91■□□□□ 0.14
RPS13-201ENST00000228140 ZFYVE9O95405 1425 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 1084.5 ms