RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 ZBED9Q6R2W3 1325 aa30.14■■■□□ 2.42
SMARCD2-201ENST00000225742 DUOX2Q9NRD8 1548 aa30.13■■■□□ 2.41
SMARCD2-201ENST00000225742 CARD11Q9BXL7 1154 aa30.13■■■□□ 2.41
SMARCD2-201ENST00000225742 ZCCHC11Q5TAX3 1644 aaKnown RBP30.1■■■□□ 2.41
SMARCD2-201ENST00000225742 CCDC144AA2RUR9 1427 aa30.1■■■□□ 2.41
SMARCD2-201ENST00000225742 PLCH2O75038 1416 aa30.1■■■□□ 2.41
SMARCD2-201ENST00000225742 MAGI2Q86UL8 1455 aa30.09■■■□□ 2.41
SMARCD2-201ENST00000225742 ERBINQ96RT1 1412 aa30.09■■■□□ 2.41
SMARCD2-201ENST00000225742 FAM9BQ8IZU0 186 aa30.07■■■□□ 2.4
SMARCD2-201ENST00000225742 DCAF11Q8TEB1 546 aa30.07■■■□□ 2.4
SMARCD2-201ENST00000225742 TRPM1Q7Z4N2 1603 aa30.06■■■□□ 2.4
SMARCD2-201ENST00000225742 ATP10AO60312 1499 aa30.05■■■□□ 2.4
SMARCD2-201ENST00000225742 LAMC1P11047 1609 aa30.04■■■□□ 2.4
SMARCD2-201ENST00000225742 PRAG1Q86YV5 1406 aa30.04■■■□□ 2.4
SMARCD2-201ENST00000225742 KTN1Q86UP2 1357 aaKnown RBP30.04■■■□□ 2.4
SMARCD2-201ENST00000225742 EFCAB2Q5VUJ9 269 aa30.03■■■□□ 2.4
SMARCD2-201ENST00000225742 ARAP3Q8WWN8 1544 aa30.02■■■□□ 2.4
SMARCD2-201ENST00000225742 PLA2R1Q13018 1463 aa30.01■■■□□ 2.4
SMARCD2-201ENST00000225742 KDM2AQ9Y2K7 1162 aa30.01■■■□□ 2.4
SMARCD2-201ENST00000225742 ABCC1P33527 1531 aa30.01■■■□□ 2.39
SMARCD2-201ENST00000225742 E9PCH4 1651 aa29.99■■■□□ 2.39
SMARCD2-201ENST00000225742 GPRASP1Q5JY77 1395 aa29.98■■■□□ 2.39
SMARCD2-201ENST00000225742 EIF2AK4Q9P2K8 1649 aaKnown RBP29.98■■■□□ 2.39
SMARCD2-201ENST00000225742 ST20-MTHFSA0A0A6YYL1 179 aa29.96■■■□□ 2.39
SMARCD2-201ENST00000225742 POLR3GLQ9BT43 218 aa29.95■■■□□ 2.39
SMARCD2-201ENST00000225742 A2MP01023 1474 aa29.94■■■□□ 2.38
SMARCD2-201ENST00000225742 RTEL1-TNFRSF6BF6WH68 1400 aa29.92■■■□□ 2.38
SMARCD2-201ENST00000225742 RALBP1Q15311 655 aa29.9■■■□□ 2.38
SMARCD2-201ENST00000225742 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.89■■■□□ 2.381e-7■■■■□ 21.5
SMARCD2-201ENST00000225742 PRDM15P57071 1507 aaPredicted RBP29.89■■■□□ 2.38
SMARCD2-201ENST00000225742 SMG6Q86US8 1419 aaKnown RBP29.88■■■□□ 2.37
SMARCD2-201ENST00000225742 BRD4O60885 1362 aaPredicted RBP29.86■■■□□ 2.37
SMARCD2-201ENST00000225742 PPP4R2Q9NY27 417 aa29.86■■■□□ 2.37
SMARCD2-201ENST00000225742 TRAPPC8Q9Y2L5 1435 aa29.85■■■□□ 2.37
SMARCD2-201ENST00000225742 PNISRQ8TF01 805 aaKnown RBP29.83■■■□□ 2.37
SMARCD2-201ENST00000225742 MYBBP1AQ9BQG0 1328 aaKnown RBP29.83■■■□□ 2.37
SMARCD2-201ENST00000225742 TMC1Q8TDI8 760 aa29.8■■■□□ 2.36
SMARCD2-201ENST00000225742 COL17A1Q9UMD9 1497 aaPredicted RBP29.8■■■□□ 2.36
SMARCD2-201ENST00000225742 ZFYVE16Q7Z3T8 1539 aa29.8■■■□□ 2.36
SMARCD2-201ENST00000225742 RGL3Q3MIN7 710 aa29.79■■■□□ 2.36
SMARCD2-201ENST00000225742 SPAG9O60271 1321 aaKnown RBP29.79■■■□□ 2.36
SMARCD2-201ENST00000225742 RNF17Q9BXT8 1623 aaKnown RBP29.78■■■□□ 2.36
SMARCD2-201ENST00000225742 LRPPRCP42704 1394 aaKnown RBP29.78■■■□□ 2.36
SMARCD2-201ENST00000225742 DEPDC5O75140 1603 aa29.77■■■□□ 2.36
SMARCD2-201ENST00000225742 STAC3Q96MF2 364 aa29.77■■■□□ 2.36
SMARCD2-201ENST00000225742 WASHC2CQ9Y4E1 1318 aa29.77■■■□□ 2.36
SMARCD2-201ENST00000225742 WDR7Q9Y4E6 1490 aa29.77■■■□□ 2.36
SMARCD2-201ENST00000225742 ABCA9Q8IUA7 1624 aa29.75■■■□□ 2.35
SMARCD2-201ENST00000225742 IRX6P78412 446 aaPredicted RBP29.75■■■□□ 2.35
SMARCD2-201ENST00000225742 NBPF1Q3BBV0 1214 aa29.75■■■□□ 2.35
SMARCD2-201ENST00000225742 NUDCQ9Y266 331 aa29.75■■■□□ 2.35
SMARCD2-201ENST00000225742 TRPM2O94759 1503 aa29.74■■■□□ 2.35
SMARCD2-201ENST00000225742 PARD3Q8TEW0 1356 aa29.72■■■□□ 2.35
SMARCD2-201ENST00000225742 RBM19Q9Y4C8 960 aaKnown RBP29.72■■■□□ 2.35
SMARCD2-201ENST00000225742 INO80Q9ULG1 1556 aaPredicted RBP29.71■■■□□ 2.35
SMARCD2-201ENST00000225742 TET3O43151 1660 aa29.71■■■□□ 2.35
SMARCD2-201ENST00000225742 PTPRTO14522 1441 aa29.7■■■□□ 2.35
SMARCD2-201ENST00000225742 CEP152O94986 1710 aa29.7■■■□□ 2.35
SMARCD2-201ENST00000225742 SPHKAPQ2M3C7 1700 aa29.69■■■□□ 2.34
SMARCD2-201ENST00000225742 TESK2Q96S53 571 aa29.69■■■□□ 2.34
SMARCD2-201ENST00000225742 RNF123Q5XPI4 1314 aa29.69■■■□□ 2.34
SMARCD2-201ENST00000225742 ATP7AQ04656 1500 aa29.67■■■□□ 2.34
SMARCD2-201ENST00000225742 MADDQ8WXG6 1647 aa29.67■■■□□ 2.34
SMARCD2-201ENST00000225742 NLRP13Q86W25 1043 aa29.66■■■□□ 2.34
SMARCD2-201ENST00000225742 VWDEQ8N2E2 1590 aa29.66■■■□□ 2.34
SMARCD2-201ENST00000225742 NEURL4Q96JN8 1562 aa29.66■■■□□ 2.34
SMARCD2-201ENST00000225742 FANCAO15360 1455 aa29.65■■■□□ 2.34
SMARCD2-201ENST00000225742 INSRP06213 1382 aa29.65■■■□□ 2.34
SMARCD2-201ENST00000225742 PER1O15534 1290 aaPredicted RBP29.65■■■□□ 2.34
SMARCD2-201ENST00000225742 TMF1P82094 1093 aa29.65■■■□□ 2.34
SMARCD2-201ENST00000225742 CNGB1Q14028 1251 aaPredicted RBP29.65■■■□□ 2.34
SMARCD2-201ENST00000225742 KANK1Q14678 1352 aa29.64■■■□□ 2.34
SMARCD2-201ENST00000225742 ZMYM4Q5VZL5 1548 aa29.63■■■□□ 2.33
SMARCD2-201ENST00000225742 AFAP1Q8N556 730 aa29.62■■■□□ 2.33
SMARCD2-201ENST00000225742 IQGAP1P46940 1657 aa29.62■■■□□ 2.33
SMARCD2-201ENST00000225742 DISP3Q9P2K9 1392 aa29.62■■■□□ 2.33
SMARCD2-201ENST00000225742 SCAPERQ9BY12 1400 aa29.6■■■□□ 2.33
SMARCD2-201ENST00000225742 CLTCL1P53675 1640 aa29.58■■■□□ 2.33
SMARCD2-201ENST00000225742 KIAA1210Q9ULL0 1709 aa29.57■■■□□ 2.32
SMARCD2-201ENST00000225742 ADGRL1O94910 1474 aa29.55■■■□□ 2.32
SMARCD2-201ENST00000225742 SCAF11Q99590 1463 aaKnown RBP29.52■■■□□ 2.32
SMARCD2-201ENST00000225742 PDE3BQ13370 1112 aa29.52■■■□□ 2.32
SMARCD2-201ENST00000225742 CDCA8Q53HL2 280 aa29.5■■■□□ 2.31
SMARCD2-201ENST00000225742 PANK3Q9H999 370 aa29.5■■■□□ 2.31
SMARCD2-201ENST00000225742 ASXL2Q76L83 1435 aa29.5■■■□□ 2.31
SMARCD2-201ENST00000225742 ANP32EQ9BTT0 268 aa29.49■■■□□ 2.31
SMARCD2-201ENST00000225742 MROH1Q8NDA8 1641 aa29.49■■■□□ 2.31
SMARCD2-201ENST00000225742 FANCIQ9NVI1 1328 aa29.47■■■□□ 2.31
SMARCD2-201ENST00000225742 B4GALNT3Q6L9W6 998 aa29.46■■■□□ 2.31
SMARCD2-201ENST00000225742 SYNMO15061 1565 aa29.45■■■□□ 2.3
SMARCD2-201ENST00000225742 EIF3AQ14152 1382 aaKnown RBP29.44■■■□□ 2.3
SMARCD2-201ENST00000225742 MYOM2P54296 1465 aa29.44■■■□□ 2.3
SMARCD2-201ENST00000225742 LMTK2Q8IWU2 1503 aa29.44■■■□□ 2.3
SMARCD2-201ENST00000225742 SLC24A1O60721 1099 aa29.43■■■□□ 2.3
SMARCD2-201ENST00000225742 CFAP74Q9C0B2 1584 aa29.43■■■□□ 2.3
SMARCD2-201ENST00000225742 BLMP54132 1417 aaPredicted RBP29.43■■■□□ 2.3
SMARCD2-201ENST00000225742 KIF3BO15066 747 aa29.43■■■□□ 2.3
SMARCD2-201ENST00000225742 KIDINS220Q9ULH0 1771 aa29.42■■■□□ 2.3
SMARCD2-201ENST00000225742 EFCAB6Q5THR3 1501 aa29.42■■■□□ 2.3
SMARCD2-201ENST00000225742 KIF1BO60333 1816 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms