RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 NPATQ14207 1427 aa26.79■■□□□ 1.88
MRPL28-201ENST00000199706 RRBP1Q9P2E9 1410 aaKnown RBP26.79■■□□□ 1.88
MRPL28-201ENST00000199706 LMTK3Q96Q04 1460 aa26.79■■□□□ 1.88
MRPL28-201ENST00000199706 ZC3H13Q5T200 1668 aaKnown RBP26.79■■□□□ 1.88
MRPL28-201ENST00000199706 KIF3BO15066 747 aa26.78■■□□□ 1.88
MRPL28-201ENST00000199706 FAM50AQ14320 339 aaKnown RBP26.77■■□□□ 1.88
MRPL28-201ENST00000199706 GGT6Q6P531 493 aa26.76■■□□□ 1.87
MRPL28-201ENST00000199706 DEPDC5O75140 1603 aa26.76■■□□□ 1.87
MRPL28-201ENST00000199706 MROH1Q8NDA8 1641 aa26.76■■□□□ 1.87
MRPL28-201ENST00000199706 PRDM15P57071 1507 aaPredicted RBP26.75■■□□□ 1.87
MRPL28-201ENST00000199706 ZMYM3Q14202 1370 aa26.74■■□□□ 1.87
MRPL28-201ENST00000199706 ROCK1Q13464 1354 aa26.73■■□□□ 1.87
MRPL28-201ENST00000199706 CEBPAP49715 358 aaPredicted RBP26.69■■□□□ 1.86
MRPL28-201ENST00000199706 PTPRKQ15262 1439 aa26.69■■□□□ 1.86
MRPL28-201ENST00000199706 ABCC3O15438 1527 aa26.69■■□□□ 1.86
MRPL28-201ENST00000199706 RRP7BPQ9NSQ0 103 aa26.68■■□□□ 1.86
MRPL28-201ENST00000199706 PZPP20742 1482 aa26.68■■□□□ 1.86
MRPL28-201ENST00000199706 PPARGC1BQ86YN6 1023 aaKnown RBP26.67■■□□□ 1.86
MRPL28-201ENST00000199706 UHRF1BP1Q6BDS2 1440 aa26.66■■□□□ 1.86
MRPL28-201ENST00000199706 WASHC2CQ9Y4E1 1318 aa26.65■■□□□ 1.86
MRPL28-201ENST00000199706 CHIC2Q9UKJ5 165 aa26.64■■□□□ 1.86
MRPL28-201ENST00000199706 ANKRD50Q9ULJ7 1429 aa26.63■■□□□ 1.85
MRPL28-201ENST00000199706 VWDEQ8N2E2 1590 aa26.63■■□□□ 1.85
MRPL28-201ENST00000199706 ZNF142P52746 1687 aaPredicted RBP26.62■■□□□ 1.85
MRPL28-201ENST00000199706 CAMSAP1Q5T5Y3 1602 aa26.61■■□□□ 1.85
MRPL28-201ENST00000199706 LMTK2Q8IWU2 1503 aa26.6■■□□□ 1.85
MRPL28-201ENST00000199706 CEP152O94986 1710 aa26.6■■□□□ 1.85
MRPL28-201ENST00000199706 PLPPR3Q6T4P5 718 aa26.6■■□□□ 1.85
MRPL28-201ENST00000199706 MYO3AQ8NEV4 1616 aa26.6■■□□□ 1.85
MRPL28-201ENST00000199706 ARHGAP31Q2M1Z3 1444 aa26.58■■□□□ 1.85
MRPL28-201ENST00000199706 UNC13BO14795 1591 aa26.56■■□□□ 1.84
MRPL28-201ENST00000199706 KANK1Q14678 1352 aa26.56■■□□□ 1.84
MRPL28-201ENST00000199706 SPATA31D1Q6ZQQ2 1576 aa26.54■■□□□ 1.84
MRPL28-201ENST00000199706 CEP170BQ9Y4F5 1589 aaPredicted RBP26.53■■□□□ 1.84
MRPL28-201ENST00000199706 TNRQ92752 1358 aa26.5■■□□□ 1.83
MRPL28-201ENST00000199706 NLRP1Q9C000 1473 aa26.49■■□□□ 1.83
MRPL28-201ENST00000199706 EFCAB6Q5THR3 1501 aa26.49■■□□□ 1.83
MRPL28-201ENST00000199706 A2ML1A8K2U0 1454 aa26.49■■□□□ 1.83
MRPL28-201ENST00000199706 ERVK-7P63135 1459 aa26.49■■□□□ 1.83
MRPL28-201ENST00000199706 GCC2Q8IWJ2 1684 aa26.48■■□□□ 1.83
MRPL28-201ENST00000199706 HSPA2P54652 639 aa26.46■■□□□ 1.83
MRPL28-201ENST00000199706 TET3O43151 1660 aa26.45■■□□□ 1.82
MRPL28-201ENST00000199706 PLA2R1Q13018 1463 aa26.45■■□□□ 1.82
MRPL28-201ENST00000199706 RPRD2Q5VT52 1461 aaKnown RBP26.45■■□□□ 1.82
MRPL28-201ENST00000199706 IQGAP3Q86VI3 1631 aa26.44■■□□□ 1.82
MRPL28-201ENST00000199706 STRCQ7RTU9 1775 aa26.43■■□□□ 1.82
MRPL28-201ENST00000199706 HFM1A2PYH4 1435 aa26.43■■□□□ 1.82
MRPL28-201ENST00000199706 ITGAEP38570 1179 aa26.43■■□□□ 1.82
MRPL28-201ENST00000199706 FBXO31Q5XUX0 539 aaPredicted RBP26.42■■□□□ 1.82
MRPL28-201ENST00000199706 NAIPQ13075 1403 aa26.41■■□□□ 1.82
MRPL28-201ENST00000199706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.41■■□□□ 1.828e-6■□□□□ 8.2
MRPL28-201ENST00000199706 KDM5AP29375 1690 aaKnown RBP26.36■■□□□ 1.81
MRPL28-201ENST00000199706 NOS1P29475 1434 aa26.35■■□□□ 1.81
MRPL28-201ENST00000199706 CFAP65Q6ZU64 1925 aaKnown RBP26.35■■□□□ 1.81
MRPL28-201ENST00000199706 UGGT1Q9NYU2 1555 aa26.34■■□□□ 1.81
MRPL28-201ENST00000199706 DMRT2Q9Y5R5 561 aa26.34■■□□□ 1.81
MRPL28-201ENST00000199706 PTPRTO14522 1441 aa26.33■■□□□ 1.81
MRPL28-201ENST00000199706 SYNMO15061 1565 aa26.3■■□□□ 1.8
MRPL28-201ENST00000199706 UBR1Q8IWV7 1749 aa26.3■■□□□ 1.8
MRPL28-201ENST00000199706 E9PCH4 1651 aa26.29■■□□□ 1.8
MRPL28-201ENST00000199706 PKD2Q13563 968 aa26.29■■□□□ 1.8
MRPL28-201ENST00000199706 NUP155O75694 1391 aa26.29■■□□□ 1.8
MRPL28-201ENST00000199706 POLR1AO95602 1720 aaPredicted RBP26.28■■□□□ 1.8
MRPL28-201ENST00000199706 THEMISQ8N1K5 641 aaPredicted RBP26.26■■□□□ 1.79
MRPL28-201ENST00000199706 PIK3C2BO00750 1634 aa26.25■■□□□ 1.79
MRPL28-201ENST00000199706 ACIN1Q9UKV3 1341 aaKnown RBP26.22■■□□□ 1.79
MRPL28-201ENST00000199706 SLC52A1Q9NWF4 448 aa26.22■■□□□ 1.79
MRPL28-201ENST00000199706 SLIT1O75093 1534 aa26.22■■□□□ 1.79
MRPL28-201ENST00000199706 NEURL4Q96JN8 1562 aa26.21■■□□□ 1.79
MRPL28-201ENST00000199706 ARHGAP23Q9P227 1491 aa26.21■■□□□ 1.79
MRPL28-201ENST00000199706 ADGRB3O60242 1522 aa26.2■■□□□ 1.79
MRPL28-201ENST00000199706 MED14O60244 1454 aa26.2■■□□□ 1.78
MRPL28-201ENST00000199706 SPHKAPQ2M3C7 1700 aa26.16■■□□□ 1.78
MRPL28-201ENST00000199706 IDI1Q13907 227 aa26.14■■□□□ 1.78
MRPL28-201ENST00000199706 ANKLE2Q86XL3 938 aa26.14■■□□□ 1.78
MRPL28-201ENST00000199706 NCKAP5LQ9HCH0 1330 aa26.14■■□□□ 1.77
MRPL28-201ENST00000199706 SCAF11Q99590 1463 aaKnown RBP26.11■■□□□ 1.77
MRPL28-201ENST00000199706 TMEM2Q9UHN6 1383 aa26.11■■□□□ 1.77
MRPL28-201ENST00000199706 TMEM131LA2VDJ0 1609 aa26.1■■□□□ 1.77
MRPL28-201ENST00000199706 IQGAP1P46940 1657 aa26.1■■□□□ 1.77
MRPL28-201ENST00000199706 SETD5Q9C0A6 1442 aa26.1■■□□□ 1.77
MRPL28-201ENST00000199706 TRPM2O94759 1503 aa26.09■■□□□ 1.77
MRPL28-201ENST00000199706 NPHP4O75161 1426 aaPredicted RBP26.08■■□□□ 1.77
MRPL28-201ENST00000199706 LTBP4Q8N2S1 1624 aa26.06■■□□□ 1.76
MRPL28-201ENST00000199706 MYO5BQ9ULV0 1848 aa26.04■■□□□ 1.76
MRPL28-201ENST00000199706 STAG3Q9UJ98 1225 aa26.04■■□□□ 1.76
MRPL28-201ENST00000199706 TRIM52Q96A61 297 aa26.02■■□□□ 1.76
MRPL28-201ENST00000199706 ZFYVE9O95405 1425 aa26.02■■□□□ 1.76
MRPL28-201ENST00000199706 IQSEC2Q5JU85 1478 aa26.02■■□□□ 1.76
MRPL28-201ENST00000199706 EID1Q9Y6B2 187 aa26.01■■□□□ 1.75
MRPL28-201ENST00000199706 SLC4A1APQ9BWU0 796 aaKnown RBP26■■□□□ 1.75
MRPL28-201ENST00000199706 CLTCL1P53675 1640 aa25.99■■□□□ 1.75
MRPL28-201ENST00000199706 RAB3GAP2Q9H2M9 1393 aa25.98■■□□□ 1.75
MRPL28-201ENST00000199706 HRCP23327 699 aa25.98■■□□□ 1.75
MRPL28-201ENST00000199706 LTKP29376 864 aa25.98■■□□□ 1.75
MRPL28-201ENST00000199706 TXNDC2Q86VQ3 553 aa25.98■■□□□ 1.75
MRPL28-201ENST00000199706 CPS1P31327 1500 aa25.95■■□□□ 1.74
MRPL28-201ENST00000199706 CERKQ8TCT0 537 aa25.95■■□□□ 1.74
MRPL28-201ENST00000199706 KIF1BO60333 1816 aa25.95■■□□□ 1.74
MRPL28-201ENST00000199706 RIMS2Q9UQ26 1411 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms