RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Pde4cQ3UEI1 686 aa11.41□□□□□ -0.58
Col28a1-201ENSMUST00000115537 Sox12Q04890 314 aa11.4□□□□□ -0.58
Col28a1-201ENSMUST00000115537 Atp10dQ8K2X1 1416 aa11.4□□□□□ -0.58
Col28a1-201ENSMUST00000115537 TnnQ80Z71 1560 aa11.4□□□□□ -0.58
Col28a1-201ENSMUST00000115537 AampJ3QN89 436 aa11.4□□□□□ -0.58
Col28a1-201ENSMUST00000115537 Prdm16A2A935 1275 aa11.4□□□□□ -0.59
Col28a1-201ENSMUST00000115537 Znf316Q6PGE4 1016 aa11.4□□□□□ -0.59
Col28a1-201ENSMUST00000115537 Nup160Q9Z0W3 1402 aaKnown RBP11.39□□□□□ -0.59
Col28a1-201ENSMUST00000115537 Fan1Q69ZT1 1020 aa11.39□□□□□ -0.59
Col28a1-201ENSMUST00000115537 UacaQ8CGB3 1411 aa11.39□□□□□ -0.59
Col28a1-201ENSMUST00000115537 Lrriq1Q0P5X1 1673 aa11.39□□□□□ -0.59
Col28a1-201ENSMUST00000115537 Arhgef5E9Q7D5 1581 aa11.39□□□□□ -0.59
Col28a1-201ENSMUST00000115537 Ggt6Q6PDE7 497 aa11.39□□□□□ -0.59
Col28a1-201ENSMUST00000115537 Magi1Q6RHR9 1471 aa11.39□□□□□ -0.59
Col28a1-201ENSMUST00000115537 Chmp5Q9D7S9 219 aa11.38□□□□□ -0.59
Col28a1-201ENSMUST00000115537 DmtnQ9WV69 405 aa11.38□□□□□ -0.59
Col28a1-201ENSMUST00000115537 Mug1P28665 1476 aa11.38□□□□□ -0.59
Col28a1-201ENSMUST00000115537 Ythdc1E9Q5K9 736 aaKnown RBP11.38□□□□□ -0.59
Col28a1-201ENSMUST00000115537 Utp14aQ640M1 767 aaKnown RBP11.38□□□□□ -0.59
Col28a1-201ENSMUST00000115537 A2mQ6GQT1 1474 aa11.38□□□□□ -0.59
Col28a1-201ENSMUST00000115537 EspnQ9ET47 871 aa11.37□□□□□ -0.59
Col28a1-201ENSMUST00000115537 Abcc1O35379 1528 aa11.37□□□□□ -0.59
Col28a1-201ENSMUST00000115537 Rundc1Q0VDN7 615 aa11.37□□□□□ -0.59
Col28a1-201ENSMUST00000115537 Magi3Q9EQJ9 1476 aa11.35□□□□□ -0.59
Col28a1-201ENSMUST00000115537 Zfp777B9EKF4 885 aa11.35□□□□□ -0.59
Col28a1-201ENSMUST00000115537 Shq1Q7TMX5 569 aa11.35□□□□□ -0.59
Col28a1-201ENSMUST00000115537 Ttll13A4Q9F6 804 aa11.34□□□□□ -0.59
Col28a1-201ENSMUST00000115537 Rangap1P46061 589 aaKnown RBP11.34□□□□□ -0.59
Col28a1-201ENSMUST00000115537 Rrp12Q6P5B0 1295 aaKnown RBP11.34□□□□□ -0.59
Col28a1-201ENSMUST00000115537 Gpatch8A2A6A1 1505 aa11.34□□□□□ -0.59
Col28a1-201ENSMUST00000115537 Polr3glQ8R0C0 218 aa11.34□□□□□ -0.59
Col28a1-201ENSMUST00000115537 Gtf2e1Q9D0D5 440 aa11.34□□□□□ -0.59
Col28a1-201ENSMUST00000115537 Bcl11bQ99PV8 884 aa11.33□□□□□ -0.6
Col28a1-201ENSMUST00000115537 WizO88286 1684 aaKnown RBP11.33□□□□□ -0.6
Col28a1-201ENSMUST00000115537 NudcO35685 332 aaKnown RBP11.33□□□□□ -0.6
Col28a1-201ENSMUST00000115537 Shroom2A2ALU4 1481 aa11.32□□□□□ -0.6
Col28a1-201ENSMUST00000115537 Fhad1A6PWD2 1420 aa11.32□□□□□ -0.6
Col28a1-201ENSMUST00000115537 PnisrA2AJT4 805 aaKnown RBP11.32□□□□□ -0.6
Col28a1-201ENSMUST00000115537 4933402E13RikQ9D4D2 429 aa11.32□□□□□ -0.6
Col28a1-201ENSMUST00000115537 IbspQ61711 324 aa11.31□□□□□ -0.6
Col28a1-201ENSMUST00000115537 Prkrip1Q9CWV6 186 aaKnown RBP11.31□□□□□ -0.6
Col28a1-201ENSMUST00000115537 Mbd3Q9Z2D8 285 aaKnown RBP11.31□□□□□ -0.6
Col28a1-201ENSMUST00000115537 Rusc2Q80U22 1514 aa11.31□□□□□ -0.6
Col28a1-201ENSMUST00000115537 Ankrd36D3Z4K0 1415 aa11.31□□□□□ -0.6
Col28a1-201ENSMUST00000115537 Cwc22Q8C5N3 908 aaKnown RBP11.31□□□□□ -0.6
Col28a1-201ENSMUST00000115537 Apbb1Q9QXJ1 710 aa11.31□□□□□ -0.6
Col28a1-201ENSMUST00000115537 L3mbtl2P59178 703 aa11.3□□□□□ -0.6
Col28a1-201ENSMUST00000115537 Ecm2Q5FW85 670 aa11.3□□□□□ -0.6
Col28a1-201ENSMUST00000115537 Srcin1Q9QWI6 1250 aa11.3□□□□□ -0.6
Col28a1-201ENSMUST00000115537 DekQ7TNV0 380 aaKnown RBP11.29□□□□□ -0.6
Col28a1-201ENSMUST00000115537 Plcb2A3KGF7 1181 aa11.29□□□□□ -0.6
Col28a1-201ENSMUST00000115537 Ipo8Q7TMY7 1010 aa11.29□□□□□ -0.6
Col28a1-201ENSMUST00000115537 Ncoa3O09000 1398 aa11.29□□□□□ -0.6
Col28a1-201ENSMUST00000115537 Lmod3E9QA62 571 aa11.29□□□□□ -0.6
Col28a1-201ENSMUST00000115537 Tnnt2P50752 301 aa11.29□□□□□ -0.6
Col28a1-201ENSMUST00000115537 Eif2s2Q99L45 331 aaKnown RBP11.28□□□□□ -0.6
Col28a1-201ENSMUST00000115537 Q9D9H8 365 aa11.28□□□□□ -0.6
Col28a1-201ENSMUST00000115537 Gm6268A2A3U9 297 aa11.28□□□□□ -0.6
Col28a1-201ENSMUST00000115537 Armcx1Q9CX83 456 aa11.28□□□□□ -0.6
Col28a1-201ENSMUST00000115537 NexmifQ5DTT1 1515 aa11.28□□□□□ -0.6
Col28a1-201ENSMUST00000115537 Irx6Q9ER75 438 aa11.27□□□□□ -0.6
Col28a1-201ENSMUST00000115537 Usp47Q8BY87 1376 aa11.27□□□□□ -0.6
Col28a1-201ENSMUST00000115537 Phf14Q9D4H9 881 aa11.27□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Pcf11G3X9Z4 1553 aa11.27□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Vsig10D3YX43 558 aa11.27□□□□□ -0.61
Col28a1-201ENSMUST00000115537 BccipQ9CWI3 316 aa11.27□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Unc13aQ4KUS2 1712 aa11.26□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Eif4g3Q80XI3 1579 aaKnown RBP11.26□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Mak16Q8BGS0 296 aaKnown RBP11.26□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Ttll5Q8CHB8 1328 aa11.25□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Nsd2Q8BVE8 1365 aa11.25□□□□□ -0.61
Col28a1-201ENSMUST00000115537 ErbinQ80TH2 1402 aa11.25□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Dnajc5P60904 198 aa11.25□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Tiam1Q60610 1591 aa11.25□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Fancd2Q80V62 1450 aa11.24□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Adgrl3Q80TS3 1537 aa11.24□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Zscan21Q07231 555 aa11.24□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Rwdd1Q9CQK7 243 aa11.24□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Gtf3c5Q8R2T8 520 aa11.24□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Mink1Q9JM52 1308 aa11.23□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Paxip1Q6NZQ4 1056 aa11.23□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Ankrd26Q811D2 1581 aa11.23□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Ddrgk1Q80WW9 315 aa11.22□□□□□ -0.61
Col28a1-201ENSMUST00000115537 OvosQ3UU35 1456 aa11.22□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Cd109Q8R422 1442 aa11.22□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Usp40Q8BWR4 1235 aa11.22□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Abcc5Q9R1X5 1436 aa11.22□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Birc3O08863 600 aa11.21□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Plin1Q8CGN5 517 aa11.21□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Ak7Q9D2H2 614 aa11.21□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Trappc8E9PWG2 1437 aa11.21□□□□□ -0.61
Col28a1-201ENSMUST00000115537 Kcnn1Q9EQR3 537 aa11.2□□□□□ -0.62
Col28a1-201ENSMUST00000115537 SlkO54988 1233 aa11.2□□□□□ -0.62
Col28a1-201ENSMUST00000115537 Ap3b2Q9JME5 1082 aa11.2□□□□□ -0.62
Col28a1-201ENSMUST00000115537 Mapk8ip3Q9ESN9 1337 aa11.2□□□□□ -0.62
Col28a1-201ENSMUST00000115537 Wdr7Q920I9 1489 aa11.2□□□□□ -0.62
Col28a1-201ENSMUST00000115537 Kif20aP97329 887 aa11.2□□□□□ -0.62
Col28a1-201ENSMUST00000115537 Nkx1-2P42580 305 aa11.19□□□□□ -0.62
Col28a1-201ENSMUST00000115537 Mlh3A0A1Y7VMP7 1443 aa11.19□□□□□ -0.62
Col28a1-201ENSMUST00000115537 Il16O54824 1322 aa11.19□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms