RNA–Protein interactions for RNA: ENSMUST00000113054.8

Shroom3-202, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-202ENSMUST00000113054 Stk31Q99MW1 1018 aa18.07■□□□□ 0.48
Shroom3-202ENSMUST00000113054 BccipQ9CWI3 316 aa18.07■□□□□ 0.48
Shroom3-202ENSMUST00000113054 Fyco1Q8VDC1 1437 aa18.06■□□□□ 0.48
Shroom3-202ENSMUST00000113054 Dhx16G3X8X0 1044 aaKnown RBP18.06■□□□□ 0.48
Shroom3-202ENSMUST00000113054 Ipo8Q7TMY7 1010 aa18.06■□□□□ 0.48
Shroom3-202ENSMUST00000113054 Ccer1Q9CQL2 403 aa18.06■□□□□ 0.48
Shroom3-202ENSMUST00000113054 Kri1Q8VDQ9 704 aaKnown RBP18.04■□□□□ 0.48
Shroom3-202ENSMUST00000113054 Cep162Q6ZQ06 1403 aa18.04■□□□□ 0.48
Shroom3-202ENSMUST00000113054 Pds5bQ4VA53 1446 aaKnown RBP18.04■□□□□ 0.48
Shroom3-202ENSMUST00000113054 Eif2s2Q99L45 331 aaKnown RBP18.04■□□□□ 0.48
Shroom3-202ENSMUST00000113054 Pank3Q8R2W9 370 aa18.04■□□□□ 0.48
Shroom3-202ENSMUST00000113054 Arid4aF8VPQ2 1261 aaKnown RBP18.03■□□□□ 0.48
Shroom3-202ENSMUST00000113054 Cux2P70298 1426 aa18.03■□□□□ 0.48
Shroom3-202ENSMUST00000113054 Arhgap35Q91YM2 1499 aa18.03■□□□□ 0.48
Shroom3-202ENSMUST00000113054 Gm21190A0A0G2JGJ6 266 aa18.03■□□□□ 0.48
Shroom3-202ENSMUST00000113054 Ccdc60Q8C4J0 545 aa18.01■□□□□ 0.47
Shroom3-202ENSMUST00000113054 Chmp4cQ9D7F7 232 aa18■□□□□ 0.47
Shroom3-202ENSMUST00000113054 BcanQ61361 883 aa18■□□□□ 0.47
Shroom3-202ENSMUST00000113054 Plekhh2Q8C115 1491 aa17.99■□□□□ 0.47
Shroom3-202ENSMUST00000113054 Usp40Q8BWR4 1235 aa17.99■□□□□ 0.47
Shroom3-202ENSMUST00000113054 Krt82Q99M74 516 aa17.99■□□□□ 0.47
Shroom3-202ENSMUST00000113054 SlkO54988 1233 aa17.98■□□□□ 0.47
Shroom3-202ENSMUST00000113054 Wdr78E9PYY5 807 aa17.98■□□□□ 0.47
Shroom3-202ENSMUST00000113054 Smarce1O54941 411 aaKnown RBP17.98■□□□□ 0.47
Shroom3-202ENSMUST00000113054 MsnP26041 577 aaKnown RBP17.98■□□□□ 0.47
Shroom3-202ENSMUST00000113054 ChgaP26339 463 aaKnown RBP17.98■□□□□ 0.47
Shroom3-202ENSMUST00000113054 PtmsQ9D0J8 101 aaKnown RBP17.97■□□□□ 0.47
Shroom3-202ENSMUST00000113054 Bcl2l13P59017 434 aa17.97■□□□□ 0.47
Shroom3-202ENSMUST00000113054 FosbP13346 338 aa17.97■□□□□ 0.47
Shroom3-202ENSMUST00000113054 Inpp5dQ9ES52 1191 aa17.97■□□□□ 0.47
Shroom3-202ENSMUST00000113054 Sytl4Q9R0Q1 673 aa17.97■□□□□ 0.47
Shroom3-202ENSMUST00000113054 Calcoco2A2A6M5 331 aa17.96■□□□□ 0.47
Shroom3-202ENSMUST00000113054 Ccdc47Q9D024 483 aaKnown RBP17.96■□□□□ 0.47
Shroom3-202ENSMUST00000113054 Klf15Q9EPW2 415 aa17.96■□□□□ 0.47
Shroom3-202ENSMUST00000113054 Kiaa0754Q69ZZ9 979 aa17.96■□□□□ 0.46
Shroom3-202ENSMUST00000113054 Cald1E9QA15 768 aaKnown RBP17.95■□□□□ 0.46
Shroom3-202ENSMUST00000113054 Paf1Q8K2T8 535 aa17.95■□□□□ 0.46
Shroom3-202ENSMUST00000113054 Chmp7Q8R1T1 451 aa17.95■□□□□ 0.46
Shroom3-202ENSMUST00000113054 Samd1D3YXK1 519 aa17.95■□□□□ 0.46
Shroom3-202ENSMUST00000113054 Fyb1O35601 819 aa17.95■□□□□ 0.46
Shroom3-202ENSMUST00000113054 Gm21969J3QJZ1 289 aa17.94■□□□□ 0.46
Shroom3-202ENSMUST00000113054 Neurod6P48986 337 aa17.93■□□□□ 0.46
Shroom3-202ENSMUST00000113054 Tnnt2P50752 301 aa17.93■□□□□ 0.46
Shroom3-202ENSMUST00000113054 Fnbp4Q6ZQ03 1031 aa17.93■□□□□ 0.46
Shroom3-202ENSMUST00000113054 Eva1cP58659 440 aa17.92■□□□□ 0.46
Shroom3-202ENSMUST00000113054 Pabpn1Q8CCS6 302 aaKnown RBP17.92■□□□□ 0.46
Shroom3-202ENSMUST00000113054 Fmn1Q05860 1466 aa17.92■□□□□ 0.46
Shroom3-202ENSMUST00000113054 Irx3P81067 507 aa17.92■□□□□ 0.46
Shroom3-202ENSMUST00000113054 Shroom4Q1W617 1475 aa17.91■□□□□ 0.46
Shroom3-202ENSMUST00000113054 Ccnb3Q810T2 1396 aa17.91■□□□□ 0.46
Shroom3-202ENSMUST00000113054 Dhx57Q6P5D3 1388 aaKnown RBP17.91■□□□□ 0.46
Shroom3-202ENSMUST00000113054 Fam193aQ8CGI1 1231 aaKnown RBP17.9■□□□□ 0.46
Shroom3-202ENSMUST00000113054 CntlnA2AM05 1397 aa17.9■□□□□ 0.46
Shroom3-202ENSMUST00000113054 Tpm3P21107 285 aaKnown RBP17.9■□□□□ 0.46
Shroom3-202ENSMUST00000113054 Ccp110Q7TSH4 1004 aa17.9■□□□□ 0.46
Shroom3-202ENSMUST00000113054 Hdgfl1Q2VPR5 283 aa17.9■□□□□ 0.46
Shroom3-202ENSMUST00000113054 Triml2E9PW10 424 aa17.89■□□□□ 0.46
Shroom3-202ENSMUST00000113054 AU015836B2RUM3 263 aa17.89■□□□□ 0.45
Shroom3-202ENSMUST00000113054 RdxP26043 583 aaKnown RBP17.89■□□□□ 0.45
Shroom3-202ENSMUST00000113054 Polr3gQ6NXY9 223 aa17.89■□□□□ 0.45
Shroom3-202ENSMUST00000113054 Znf704Q9ERQ3 566 aa17.89■□□□□ 0.45
Shroom3-202ENSMUST00000113054 Ipo9Q91YE6 1041 aa17.88■□□□□ 0.45
Shroom3-202ENSMUST00000113054 Kif7B7ZNG0 1348 aa17.88■□□□□ 0.45
Shroom3-202ENSMUST00000113054 Tceal9Q9DD24 104 aa17.88■□□□□ 0.45
Shroom3-202ENSMUST00000113054 G3bp1P97855 465 aaKnown RBP17.88■□□□□ 0.45
Shroom3-202ENSMUST00000113054 Drc7Q6V3W6 876 aa17.88■□□□□ 0.45
Shroom3-202ENSMUST00000113054 Smc4Q8CG47 1286 aa17.88■□□□□ 0.45
Shroom3-202ENSMUST00000113054 Sf3a1Q8K4Z5 791 aaKnown RBP17.87■□□□□ 0.45
Shroom3-202ENSMUST00000113054 GsdmaQ9EST1 446 aa17.87■□□□□ 0.45
Shroom3-202ENSMUST00000113054 Ccdc43Q9CR29 222 aaKnown RBP17.85■□□□□ 0.45
Shroom3-202ENSMUST00000113054 Rsph4aQ8BYM7 716 aa17.84■□□□□ 0.45
Shroom3-202ENSMUST00000113054 Nectin2P32507 530 aa17.84■□□□□ 0.45
Shroom3-202ENSMUST00000113054 Usp47Q8BY87 1376 aa17.84■□□□□ 0.45
Shroom3-202ENSMUST00000113054 Sf3b2Q3UJB0 878 aaKnown RBP17.84■□□□□ 0.45
Shroom3-202ENSMUST00000113054 Rfx1P48377 963 aa17.83■□□□□ 0.45
Shroom3-202ENSMUST00000113054 Sirt1Q923E4 737 aa17.83■□□□□ 0.45
Shroom3-202ENSMUST00000113054 Nutm1Q8BHP2 1126 aa17.82■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Atf3Q60765 181 aa17.82■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Zpr1Q62384 459 aa17.82■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Usp16Q99LG0 825 aa17.81■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Tpm4Q6IRU2 248 aa17.81■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Odf2A3KGV1 830 aaKnown RBP17.81■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Gabpb2P81069 414 aa17.81■□□□□ 0.44
Shroom3-202ENSMUST00000113054 CrcpO35427 148 aa17.81■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Atp6v1dP57746 247 aa17.81■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Ccdc96Q9CR92 584 aa17.81■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Q8C5K5 320 aa17.8■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Abl1P00520 1123 aa17.8■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Trim30aP15533 496 aa17.8■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Esx1O88933 382 aa17.8■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Rbm5Q91YE7 815 aaKnown RBP17.8■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Nap1l3Q794H2 544 aa17.8■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Ylpm1Q9R0I7 1386 aaKnown RBP17.8■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Ttll5Q8CHB8 1328 aa17.8■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Phactr2B1AVP0 632 aa17.79■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Evi5lH3BKQ3 813 aa17.79■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Ddx54Q8K4L0 874 aaKnown RBP17.78■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Filip1lQ6P6L0 1131 aa17.78■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Gm10471E9Q1C7 252 aa17.78■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Taok2Q6ZQ29 1240 aa17.78■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 56 ms