RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 Kri1Q8VDQ9 704 aaKnown RBP20.82■□□□□ 0.92
Shroom3-201ENSMUST00000113051 Gm21190A0A0G2JGJ6 266 aa20.82■□□□□ 0.92
Shroom3-201ENSMUST00000113051 Ccdc88bQ4QRL3 1481 aa20.82■□□□□ 0.92
Shroom3-201ENSMUST00000113051 Klf15Q9EPW2 415 aa20.81■□□□□ 0.92
Shroom3-201ENSMUST00000113051 Cux2P70298 1426 aa20.81■□□□□ 0.92
Shroom3-201ENSMUST00000113051 Pds5bQ4VA53 1446 aaKnown RBP20.81■□□□□ 0.92
Shroom3-201ENSMUST00000113051 BcanQ61361 883 aa20.81■□□□□ 0.92
Shroom3-201ENSMUST00000113051 Dnai1Q8C0M8 701 aa20.8■□□□□ 0.92
Shroom3-201ENSMUST00000113051 Ccar1Q8CH18 1146 aaKnown RBP20.8■□□□□ 0.92
Shroom3-201ENSMUST00000113051 Ccer1Q9CQL2 403 aa20.8■□□□□ 0.92
Shroom3-201ENSMUST00000113051 Chmp4cQ9D7F7 232 aa20.8■□□□□ 0.92
Shroom3-201ENSMUST00000113051 R3hcc1Q8BSI6 488 aa20.79■□□□□ 0.92
Shroom3-201ENSMUST00000113051 Sytl4Q9R0Q1 673 aa20.79■□□□□ 0.92
Shroom3-201ENSMUST00000113051 Fyco1Q8VDC1 1437 aa20.79■□□□□ 0.92
Shroom3-201ENSMUST00000113051 Pde3bQ61409 1100 aa20.79■□□□□ 0.92
Shroom3-201ENSMUST00000113051 Paf1Q8K2T8 535 aa20.78■□□□□ 0.92
Shroom3-201ENSMUST00000113051 Pank3Q8R2W9 370 aa20.78■□□□□ 0.92
Shroom3-201ENSMUST00000113051 Arhgap35Q91YM2 1499 aa20.77■□□□□ 0.92
Shroom3-201ENSMUST00000113051 Bcl2l13P59017 434 aa20.77■□□□□ 0.92
Shroom3-201ENSMUST00000113051 Wdr78E9PYY5 807 aa20.76■□□□□ 0.91
Shroom3-201ENSMUST00000113051 FosbP13346 338 aa20.76■□□□□ 0.91
Shroom3-201ENSMUST00000113051 Ipo8Q7TMY7 1010 aa20.75■□□□□ 0.91
Shroom3-201ENSMUST00000113051 Ccdc60Q8C4J0 545 aa20.75■□□□□ 0.91
Shroom3-201ENSMUST00000113051 Cep162Q6ZQ06 1403 aa20.75■□□□□ 0.91
Shroom3-201ENSMUST00000113051 Plekhh2Q8C115 1491 aa20.75■□□□□ 0.91
Shroom3-201ENSMUST00000113051 Shroom4Q1W617 1475 aa20.74■□□□□ 0.91
Shroom3-201ENSMUST00000113051 Krt82Q99M74 516 aa20.74■□□□□ 0.91
Shroom3-201ENSMUST00000113051 Fnbp4Q6ZQ03 1031 aa20.74■□□□□ 0.91
Shroom3-201ENSMUST00000113051 Usp40Q8BWR4 1235 aa20.74■□□□□ 0.91
Shroom3-201ENSMUST00000113051 Fyb1O35601 819 aa20.73■□□□□ 0.91
Shroom3-201ENSMUST00000113051 Samd1D3YXK1 519 aa20.72■□□□□ 0.91
Shroom3-201ENSMUST00000113051 Pabpn1Q8CCS6 302 aaKnown RBP20.72■□□□□ 0.91
Shroom3-201ENSMUST00000113051 Hdgfl1Q2VPR5 283 aa20.71■□□□□ 0.91
Shroom3-201ENSMUST00000113051 Chmp7Q8R1T1 451 aa20.71■□□□□ 0.91
Shroom3-201ENSMUST00000113051 Ccdc47Q9D024 483 aaKnown RBP20.7■□□□□ 0.9
Shroom3-201ENSMUST00000113051 Eva1cP58659 440 aa20.7■□□□□ 0.9
Shroom3-201ENSMUST00000113051 Neurod6P48986 337 aa20.7■□□□□ 0.9
Shroom3-201ENSMUST00000113051 Inpp5dQ9ES52 1191 aa20.69■□□□□ 0.9
Shroom3-201ENSMUST00000113051 Znf704Q9ERQ3 566 aa20.69■□□□□ 0.9
Shroom3-201ENSMUST00000113051 SlkO54988 1233 aa20.69■□□□□ 0.9
Shroom3-201ENSMUST00000113051 ChgaP26339 463 aaKnown RBP20.68■□□□□ 0.9
Shroom3-201ENSMUST00000113051 Smarce1O54941 411 aaKnown RBP20.68■□□□□ 0.9
Shroom3-201ENSMUST00000113051 Gm21969J3QJZ1 289 aa20.67■□□□□ 0.9
Shroom3-201ENSMUST00000113051 Fam193aQ8CGI1 1231 aaKnown RBP20.67■□□□□ 0.9
Shroom3-201ENSMUST00000113051 Cald1E9QA15 768 aaKnown RBP20.66■□□□□ 0.9
Shroom3-201ENSMUST00000113051 Ccp110Q7TSH4 1004 aa20.66■□□□□ 0.9
Shroom3-201ENSMUST00000113051 Kiaa0754Q69ZZ9 979 aa20.65■□□□□ 0.9
Shroom3-201ENSMUST00000113051 MsnP26041 577 aaKnown RBP20.65■□□□□ 0.9
Shroom3-201ENSMUST00000113051 Sf3b2Q3UJB0 878 aaKnown RBP20.65■□□□□ 0.9
Shroom3-201ENSMUST00000113051 Ccnb3Q810T2 1396 aa20.64■□□□□ 0.9
Shroom3-201ENSMUST00000113051 Calcoco2A2A6M5 331 aa20.63■□□□□ 0.89
Shroom3-201ENSMUST00000113051 Fmn1Q05860 1466 aa20.63■□□□□ 0.89
Shroom3-201ENSMUST00000113051 Polr3gQ6NXY9 223 aa20.63■□□□□ 0.89
Shroom3-201ENSMUST00000113051 Triml2E9PW10 424 aa20.62■□□□□ 0.89
Shroom3-201ENSMUST00000113051 Dhx57Q6P5D3 1388 aaKnown RBP20.62■□□□□ 0.89
Shroom3-201ENSMUST00000113051 Tceal9Q9DD24 104 aa20.62■□□□□ 0.89
Shroom3-201ENSMUST00000113051 PtmsQ9D0J8 101 aaKnown RBP20.61■□□□□ 0.89
Shroom3-201ENSMUST00000113051 Drc7Q6V3W6 876 aa20.61■□□□□ 0.89
Shroom3-201ENSMUST00000113051 Sirt1Q923E4 737 aa20.6■□□□□ 0.89
Shroom3-201ENSMUST00000113051 Ccdc43Q9CR29 222 aaKnown RBP20.6■□□□□ 0.89
Shroom3-201ENSMUST00000113051 Ccdc96Q9CR92 584 aa20.6■□□□□ 0.89
Shroom3-201ENSMUST00000113051 Kif7B7ZNG0 1348 aa20.6■□□□□ 0.89
Shroom3-201ENSMUST00000113051 Atf3Q60765 181 aa20.6■□□□□ 0.89
Shroom3-201ENSMUST00000113051 Tpm3P21107 285 aaKnown RBP20.6■□□□□ 0.89
Shroom3-201ENSMUST00000113051 Tnnt2P50752 301 aa20.59■□□□□ 0.89
Shroom3-201ENSMUST00000113051 Sugp2Q8CH09 1067 aa20.59■□□□□ 0.89
Shroom3-201ENSMUST00000113051 Zpr1Q62384 459 aa20.59■□□□□ 0.89
Shroom3-201ENSMUST00000113051 Smc4Q8CG47 1286 aa20.59■□□□□ 0.89
Shroom3-201ENSMUST00000113051 Evi5lH3BKQ3 813 aa20.59■□□□□ 0.89
Shroom3-201ENSMUST00000113051 AU015836B2RUM3 263 aa20.59■□□□□ 0.89
Shroom3-201ENSMUST00000113051 CntlnA2AM05 1397 aa20.58■□□□□ 0.89
Shroom3-201ENSMUST00000113051 Ddx54Q8K4L0 874 aaKnown RBP20.58■□□□□ 0.89
Shroom3-201ENSMUST00000113051 Rbm5Q91YE7 815 aaKnown RBP20.58■□□□□ 0.88
Shroom3-201ENSMUST00000113051 Nectin2P32507 530 aa20.58■□□□□ 0.88
Shroom3-201ENSMUST00000113051 G3bp1P97855 465 aaKnown RBP20.57■□□□□ 0.88
Shroom3-201ENSMUST00000113051 GsdmaQ9EST1 446 aa20.57■□□□□ 0.88
Shroom3-201ENSMUST00000113051 Nutm1Q8BHP2 1126 aa20.57■□□□□ 0.88
Shroom3-201ENSMUST00000113051 Abl1P00520 1123 aa20.56■□□□□ 0.88
Shroom3-201ENSMUST00000113051 RdxP26043 583 aaKnown RBP20.56■□□□□ 0.88
Shroom3-201ENSMUST00000113051 Sf3a1Q8K4Z5 791 aaKnown RBP20.56■□□□□ 0.88
Shroom3-201ENSMUST00000113051 AcrbpQ3V140 540 aa20.55■□□□□ 0.88
Shroom3-201ENSMUST00000113051 Ttll5Q8CHB8 1328 aa20.54■□□□□ 0.88
Shroom3-201ENSMUST00000113051 Odf2A3KGV1 830 aaKnown RBP20.54■□□□□ 0.88
Shroom3-201ENSMUST00000113051 Usp47Q8BY87 1376 aa20.54■□□□□ 0.88
Shroom3-201ENSMUST00000113051 Ripply1Q2WG77 201 aa20.54■□□□□ 0.88
Shroom3-201ENSMUST00000113051 Gm10471E9Q1C7 252 aa20.53■□□□□ 0.88
Shroom3-201ENSMUST00000113051 Usp16Q99LG0 825 aa20.53■□□□□ 0.88
Shroom3-201ENSMUST00000113051 CrcpO35427 148 aa20.53■□□□□ 0.88
Shroom3-201ENSMUST00000113051 Tpm4Q6IRU2 248 aa20.53■□□□□ 0.88
Shroom3-201ENSMUST00000113051 Rfx1P48377 963 aa20.53■□□□□ 0.88
Shroom3-201ENSMUST00000113051 MycnP03966 462 aaKnown RBP20.53■□□□□ 0.88
Shroom3-201ENSMUST00000113051 Ipo9Q91YE6 1041 aa20.53■□□□□ 0.88
Shroom3-201ENSMUST00000113051 Rsph4aQ8BYM7 716 aa20.52■□□□□ 0.88
Shroom3-201ENSMUST00000113051 Irx3P81067 507 aa20.52■□□□□ 0.88
Shroom3-201ENSMUST00000113051 Q8C5K5 320 aa20.52■□□□□ 0.88
Shroom3-201ENSMUST00000113051 Gabpb2P81069 414 aa20.52■□□□□ 0.88
Shroom3-201ENSMUST00000113051 Soga1E1U8D0 1418 aa20.51■□□□□ 0.87
Shroom3-201ENSMUST00000113051 A0A0U1RNP2 1173 aa20.5■□□□□ 0.87
Shroom3-201ENSMUST00000113051 WrnO09053 1401 aa20.5■□□□□ 0.87
Shroom3-201ENSMUST00000113051 Phactr2B1AVP0 632 aa20.5■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms