RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 Rhox8Q6VSS7 320 aa30.18■■■□□ 2.42
Shroom3-201ENSMUST00000113051 Ehmt2Q9Z148 1263 aaKnown RBP27.47■■□□□ 1.99
Shroom3-201ENSMUST00000113051 Esf1Q3V1V3 845 aaKnown RBP26.77■■□□□ 1.88
Shroom3-201ENSMUST00000113051 Cngb1E1AZ71 1325 aa26.77■■□□□ 1.88
Shroom3-201ENSMUST00000113051 Ccdc136Q3TVA9 1136 aa26.75■■□□□ 1.87
Shroom3-201ENSMUST00000113051 Ube2uB1AUC4 352 aa26.73■■□□□ 1.87
Shroom3-201ENSMUST00000113051 Zeb1Q64318 1117 aa26.52■■□□□ 1.84
Shroom3-201ENSMUST00000113051 Wdr66E9Q743 1299 aa26.5■■□□□ 1.83
Shroom3-201ENSMUST00000113051 Gab3Q8BSM5 595 aa26.42■■□□□ 1.82
Shroom3-201ENSMUST00000113051 Npm2Q80W85 207 aa26.2■■□□□ 1.79
Shroom3-201ENSMUST00000113051 Las1lA2BE28 776 aaKnown RBP26.1■■□□□ 1.77
Shroom3-201ENSMUST00000113051 Myt1lP97500 1187 aa26.1■■□□□ 1.77
Shroom3-201ENSMUST00000113051 Rpgrip1Q9EPQ2 1331 aa25.98■■□□□ 1.75
Shroom3-201ENSMUST00000113051 Trim41Q5NCC3 630 aa25.52■■□□□ 1.68
Shroom3-201ENSMUST00000113051 Pelp1Q9DBD5 1123 aaKnown RBP25.45■■□□□ 1.67
Shroom3-201ENSMUST00000113051 Slc24a1Q91WD8 1130 aa25.39■■□□□ 1.65
Shroom3-201ENSMUST00000113051 UbtfP25976 765 aaKnown RBP25.31■■□□□ 1.64
Shroom3-201ENSMUST00000113051 Il27Q8K3I6 234 aa25.27■■□□□ 1.64
Shroom3-201ENSMUST00000113051 Amer1Q7TS75 1132 aa25.04■■□□□ 1.6
Shroom3-201ENSMUST00000113051 Ap3b1Q9Z1T1 1105 aa24.95■■□□□ 1.58
Shroom3-201ENSMUST00000113051 NischQ80TM9 1593 aa24.84■■□□□ 1.57
Shroom3-201ENSMUST00000113051 Neurod1Q60867 357 aa24.83■■□□□ 1.57
Shroom3-201ENSMUST00000113051 Os9Q8K2C7 672 aa24.67■■□□□ 1.54
Shroom3-201ENSMUST00000113051 Fam50aQ9WV03 339 aaKnown RBP24.61■■□□□ 1.53
Shroom3-201ENSMUST00000113051 Ppargc1bQ8VHJ7 1014 aa24.57■■□□□ 1.52
Shroom3-201ENSMUST00000113051 Ttbk1Q6PCN3 1308 aa24.5■■□□□ 1.51
Shroom3-201ENSMUST00000113051 Zbtb7cQ8VCZ7 619 aa24.5■■□□□ 1.51
Shroom3-201ENSMUST00000113051 Eif5bQ05D44 1216 aaKnown RBP24.41■■□□□ 1.5
Shroom3-201ENSMUST00000113051 CenpbP27790 599 aa24.41■■□□□ 1.5
Shroom3-201ENSMUST00000113051 Gm35339A0A140LHH9 1649 aa24.4■■□□□ 1.5
Shroom3-201ENSMUST00000113051 Ifnlr1Q8CGK5 535 aa24.39■■□□□ 1.5
Shroom3-201ENSMUST00000113051 Stra8P70278 393 aa24.35■■□□□ 1.49
Shroom3-201ENSMUST00000113051 NefmP08553 848 aa24.35■■□□□ 1.49
Shroom3-201ENSMUST00000113051 Chic1Q8CBW7 227 aa24.29■■□□□ 1.48
Shroom3-201ENSMUST00000113051 Acin1Q9JIX8 1338 aaKnown RBP24.29■■□□□ 1.48
Shroom3-201ENSMUST00000113051 HrcG5E8J6 738 aa24.28■■□□□ 1.48
Shroom3-201ENSMUST00000113051 Abcc9P70170 1546 aa24.27■■□□□ 1.48
Shroom3-201ENSMUST00000113051 NclP09405 707 aaKnown RBP24.27■■□□□ 1.48
Shroom3-201ENSMUST00000113051 NrdcQ8BHG1 1161 aa24.22■■□□□ 1.47
Shroom3-201ENSMUST00000113051 Plppr3Q7TPB0 716 aa24.15■■□□□ 1.46
Shroom3-201ENSMUST00000113051 Zcchc6Q5BLK4 1491 aaKnown RBP24.13■■□□□ 1.45
Shroom3-201ENSMUST00000113051 Gm13697A2AK42 830 aa24.12■■□□□ 1.45
Shroom3-201ENSMUST00000113051 Anp32bQ9EST5 272 aaKnown RBP24.08■■□□□ 1.45
Shroom3-201ENSMUST00000113051 Zbtb4Q5F293 982 aa24.07■■□□□ 1.44
Shroom3-201ENSMUST00000113051 Hnrnpul2Q00PI9 745 aaKnown RBP24.04■■□□□ 1.44
Shroom3-201ENSMUST00000113051 4933416C03RikQ3V063 378 aa24.04■■□□□ 1.44
Shroom3-201ENSMUST00000113051 NeflP08551 543 aa23.99■■□□□ 1.43
Shroom3-201ENSMUST00000113051 Cdk11bP24788 784 aaKnown RBP23.99■■□□□ 1.43
Shroom3-201ENSMUST00000113051 Lmod2Q3UHZ5 550 aa23.97■■□□□ 1.43
Shroom3-201ENSMUST00000113051 Prdm10Q3UTQ7 1184 aa23.94■■□□□ 1.42
Shroom3-201ENSMUST00000113051 Atp1b4Q99ME6 356 aa23.9■■□□□ 1.42
Shroom3-201ENSMUST00000113051 Erich6D3Z6S9 713 aa23.85■■□□□ 1.41
Shroom3-201ENSMUST00000113051 4930567H17RikQ3V0K5 233 aa23.77■■□□□ 1.4
Shroom3-201ENSMUST00000113051 Fkbp15Q6P9Q6 1216 aaKnown RBP23.76■■□□□ 1.39
Shroom3-201ENSMUST00000113051 Npm1Q61937 292 aaKnown RBP23.73■■□□□ 1.39
Shroom3-201ENSMUST00000113051 Nop58Q6DFW4 536 aaKnown RBP23.73■■□□□ 1.39
Shroom3-201ENSMUST00000113051 Ccdc180J3QNE4 1664 aa23.66■■□□□ 1.38
Shroom3-201ENSMUST00000113051 TonslQ6NZL6 1363 aa23.65■■□□□ 1.38
Shroom3-201ENSMUST00000113051 Plekhg3Q4VAC9 1341 aa23.64■■□□□ 1.38
Shroom3-201ENSMUST00000113051 Gm13695A2AK44 830 aa23.63■■□□□ 1.37
Shroom3-201ENSMUST00000113051 Mapk8ip2Q9ERE9 830 aa23.57■■□□□ 1.36
Shroom3-201ENSMUST00000113051 Polr3glQ8R0C0 218 aa23.56■■□□□ 1.36
Shroom3-201ENSMUST00000113051 Pcgf6Q99NA9 353 aa23.53■■□□□ 1.36
Shroom3-201ENSMUST00000113051 Mier1Q5UAK0 511 aa23.46■■□□□ 1.35
Shroom3-201ENSMUST00000113051 Rangap1P46061 589 aaKnown RBP23.45■■□□□ 1.34
Shroom3-201ENSMUST00000113051 Nlrp6Q91WS2 869 aa23.45■■□□□ 1.34
Shroom3-201ENSMUST00000113051 Supt5hO55201 1082 aaKnown RBP23.44■■□□□ 1.34
Shroom3-201ENSMUST00000113051 Tnnt3Q9QZ47 272 aa23.42■■□□□ 1.34
Shroom3-201ENSMUST00000113051 ArxO35085 564 aa23.41■■□□□ 1.34
Shroom3-201ENSMUST00000113051 Eid3Q3V124 375 aa23.21■■□□□ 1.31
Shroom3-201ENSMUST00000113051 DiexfQ8BTT6 772 aaKnown RBP23.19■■□□□ 1.3
Shroom3-201ENSMUST00000113051 Rtl1Q7M732 1744 aa23.17■■□□□ 1.3
Shroom3-201ENSMUST00000113051 Csrnp3P59055 597 aa23.16■■□□□ 1.3
Shroom3-201ENSMUST00000113051 Safb2Q80YR5 991 aaKnown RBP23.06■■□□□ 1.28
Shroom3-201ENSMUST00000113051 Gm38655A0A286YDK6 273 aa23.04■■□□□ 1.28
Shroom3-201ENSMUST00000113051 DaxxO35613 739 aa22.99■■□□□ 1.27
Shroom3-201ENSMUST00000113051 P3h3Q8CG70 732 aa22.98■■□□□ 1.27
Shroom3-201ENSMUST00000113051 Ubl4bQ9CQ84 188 aa22.94■■□□□ 1.26
Shroom3-201ENSMUST00000113051 Chic2Q9D9G3 165 aa22.93■■□□□ 1.26
Shroom3-201ENSMUST00000113051 Rad21Q61550 635 aaKnown RBP22.88■■□□□ 1.25
Shroom3-201ENSMUST00000113051 Irx6Q9ER75 438 aa22.87■■□□□ 1.25
Shroom3-201ENSMUST00000113051 Myt1Q8CFC2 1127 aa22.79■■□□□ 1.24
Shroom3-201ENSMUST00000113051 ClspnQ80YR7 1315 aa22.76■■□□□ 1.23
Shroom3-201ENSMUST00000113051 Trim26Q99PN3 545 aa22.75■■□□□ 1.23
Shroom3-201ENSMUST00000113051 Clip1Q922J3 1391 aa22.74■■□□□ 1.23
Shroom3-201ENSMUST00000113051 Vsig10D3YX43 558 aa22.64■■□□□ 1.21
Shroom3-201ENSMUST00000113051 Anp32aO35381 247 aa22.62■■□□□ 1.21
Shroom3-201ENSMUST00000113051 Ythdc1E9Q5K9 736 aaKnown RBP22.6■■□□□ 1.21
Shroom3-201ENSMUST00000113051 Hdac5Q9Z2V6 1113 aa22.57■■□□□ 1.2
Shroom3-201ENSMUST00000113051 MyclP10166 368 aa22.54■■□□□ 1.2
Shroom3-201ENSMUST00000113051 Fgd1P52734 960 aa22.51■■□□□ 1.19
Shroom3-201ENSMUST00000113051 Rtl5Q5DTT4 599 aa22.49■■□□□ 1.19
Shroom3-201ENSMUST00000113051 NgefQ8CHT1 710 aa22.48■■□□□ 1.19
Shroom3-201ENSMUST00000113051 Rtn4Q99P72 1162 aaKnown RBP22.47■■□□□ 1.19
Shroom3-201ENSMUST00000113051 CatipB9EKE5 520 aa22.46■■□□□ 1.19
Shroom3-201ENSMUST00000113051 Ppp4r2Q0VGB7 417 aa22.44■■□□□ 1.18
Shroom3-201ENSMUST00000113051 Hsp90aa1P07901 733 aaKnown RBP22.44■■□□□ 1.18
Shroom3-201ENSMUST00000113051 DekQ7TNV0 380 aaKnown RBP22.4■■□□□ 1.18
Shroom3-201ENSMUST00000113051 Rgl3Q3UYI5 709 aa22.4■■□□□ 1.18
Shroom3-201ENSMUST00000113051 Kdm2aP59997 1161 aa22.39■■□□□ 1.18
Retrieved 100 of 22,080 RNA–protein pairs in 6.9 ms