RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 AknaQ80VW7 1404 aa23.05■■□□□ 1.28
Ebf3-201ENSMUST00000033378 Plcd4Q8K3R3 807 aa23.05■■□□□ 1.28
Ebf3-201ENSMUST00000033378 Sh3bp5Q9Z131 463 aa23.05■■□□□ 1.28
Ebf3-201ENSMUST00000033378 Ncapd3Q6ZQK0 1506 aa23.05■■□□□ 1.28
Ebf3-201ENSMUST00000033378 CgnP59242 1191 aa23.05■■□□□ 1.28
Ebf3-201ENSMUST00000033378 VgfQ0VGU4 617 aa23.05■■□□□ 1.28
Ebf3-201ENSMUST00000033378 Ccdc146E9Q9F7 977 aa23.04■■□□□ 1.28
Ebf3-201ENSMUST00000033378 Lemd3Q9WU40 921 aa23.04■■□□□ 1.28
Ebf3-201ENSMUST00000033378 Ralbp1Q62172 648 aa23.03■■□□□ 1.28
Ebf3-201ENSMUST00000033378 Znf316Q6PGE4 1016 aa23.03■■□□□ 1.28
Ebf3-201ENSMUST00000033378 Kif7B7ZNG0 1348 aa23.02■■□□□ 1.28
Ebf3-201ENSMUST00000033378 Stard8Q8K031 1019 aa23.02■■□□□ 1.28
Ebf3-201ENSMUST00000033378 Rfx1P48377 963 aa23.02■■□□□ 1.28
Ebf3-201ENSMUST00000033378 Q3TQI7 289 aaKnown RBP23.02■■□□□ 1.28
Ebf3-201ENSMUST00000033378 Ccdc60Q8C4J0 545 aa23.02■■□□□ 1.28
Ebf3-201ENSMUST00000033378 LrpprcQ6PB66 1392 aaKnown RBP23.01■■□□□ 1.27
Ebf3-201ENSMUST00000033378 Cttnbp2B9EJA2 1648 aa23■■□□□ 1.27
Ebf3-201ENSMUST00000033378 Gm973E9Q295 1059 aa23■■□□□ 1.27
Ebf3-201ENSMUST00000033378 Rassf8Q8CJ96 419 aa23■■□□□ 1.27
Ebf3-201ENSMUST00000033378 Becn1O88597 448 aa22.99■■□□□ 1.27
Ebf3-201ENSMUST00000033378 Trim58Q5NCC9 485 aa22.99■■□□□ 1.27
Ebf3-201ENSMUST00000033378 Pibf1E9Q6K3 756 aa22.98■■□□□ 1.27
Ebf3-201ENSMUST00000033378 Vps8Q0P5W1 1427 aa22.98■■□□□ 1.27
Ebf3-201ENSMUST00000033378 GsdmaQ9EST1 446 aa22.98■■□□□ 1.27
Ebf3-201ENSMUST00000033378 Ccdc30Q8BVF4 654 aa22.97■■□□□ 1.27
Ebf3-201ENSMUST00000033378 Zfp644E9QA22 1323 aa22.97■■□□□ 1.27
Ebf3-201ENSMUST00000033378 Iffo2Q8R2V2 512 aa22.97■■□□□ 1.27
Ebf3-201ENSMUST00000033378 Smarca4Q3TKT4 1613 aaKnown RBP22.96■■□□□ 1.27
Ebf3-201ENSMUST00000033378 Naip1Q9QWK5 1403 aa22.96■■□□□ 1.27
Ebf3-201ENSMUST00000033378 Pknox2Q8BG99 474 aa22.96■■□□□ 1.27
Ebf3-201ENSMUST00000033378 Tnnt1O88346 262 aa22.95■■□□□ 1.26
Ebf3-201ENSMUST00000033378 Gpatch11Q3UFS4 262 aa22.95■■□□□ 1.26
Ebf3-201ENSMUST00000033378 Q7TT23 1179 aa22.95■■□□□ 1.26
Ebf3-201ENSMUST00000033378 Znf326O88291 580 aa22.95■■□□□ 1.26
Ebf3-201ENSMUST00000033378 KarsQ99MN1 595 aaKnown RBP22.95■■□□□ 1.26
Ebf3-201ENSMUST00000033378 Ush1cQ9ES64 910 aa22.94■■□□□ 1.26
Ebf3-201ENSMUST00000033378 Atad2bE9Q166 1460 aaKnown RBP22.94■■□□□ 1.26
Ebf3-201ENSMUST00000033378 Kiaa0754Q69ZZ9 979 aa22.93■■□□□ 1.26
Ebf3-201ENSMUST00000033378 Kcnh8P59111 1102 aa22.93■■□□□ 1.26
Ebf3-201ENSMUST00000033378 Zfp444Q3TDV8 331 aaKnown RBP22.93■■□□□ 1.26
Ebf3-201ENSMUST00000033378 Eif4g2Q62448 906 aaKnown RBP22.93■■□□□ 1.26
Ebf3-201ENSMUST00000033378 Pde3bQ61409 1100 aa22.93■■□□□ 1.26
Ebf3-201ENSMUST00000033378 Ccdc183A2AJB1 534 aa22.92■■□□□ 1.26
Ebf3-201ENSMUST00000033378 Rabep1O35551 862 aa22.92■■□□□ 1.26
Ebf3-201ENSMUST00000033378 Atp6v1dP57746 247 aa22.92■■□□□ 1.26
Ebf3-201ENSMUST00000033378 Cgnl1Q6AW69 1298 aa22.92■■□□□ 1.26
Ebf3-201ENSMUST00000033378 Usp40Q8BWR4 1235 aa22.92■■□□□ 1.26
Ebf3-201ENSMUST00000033378 MecomP14404 1042 aa22.92■■□□□ 1.26
Ebf3-201ENSMUST00000033378 G3bp1P97855 465 aaKnown RBP22.92■■□□□ 1.26
Ebf3-201ENSMUST00000033378 Pank1Q8K4K6 548 aa22.92■■□□□ 1.26
Ebf3-201ENSMUST00000033378 Kif16bB1AVY7 1312 aa22.9■■□□□ 1.26
Ebf3-201ENSMUST00000033378 Smarce1O54941 411 aaKnown RBP22.9■■□□□ 1.26
Ebf3-201ENSMUST00000033378 RdxP26043 583 aaKnown RBP22.9■■□□□ 1.26
Ebf3-201ENSMUST00000033378 WrnO09053 1401 aa22.9■■□□□ 1.26
Ebf3-201ENSMUST00000033378 Clstn1Q9EPL2 979 aa22.89■■□□□ 1.25
Ebf3-201ENSMUST00000033378 Casq1O09165 405 aa22.89■■□□□ 1.25
Ebf3-201ENSMUST00000033378 CrebrfQ8CDG5 640 aaKnown RBP22.89■■□□□ 1.25
Ebf3-201ENSMUST00000033378 Phldb1Q6PDH0 1371 aaKnown RBP22.88■■□□□ 1.25
Ebf3-201ENSMUST00000033378 Arap1Q4LDD4 1452 aa22.88■■□□□ 1.25
Ebf3-201ENSMUST00000033378 CenpjQ569L8 1344 aa22.87■■□□□ 1.25
Ebf3-201ENSMUST00000033378 Tdrd9Q14BI7 1383 aa22.87■■□□□ 1.25
Ebf3-201ENSMUST00000033378 Brpf1B2RRD7 1212 aa22.87■■□□□ 1.25
Ebf3-201ENSMUST00000033378 Spag9Q58A65 1321 aaKnown RBP22.86■■□□□ 1.25
Ebf3-201ENSMUST00000033378 Cald1E9QA15 768 aaKnown RBP22.86■■□□□ 1.25
Ebf3-201ENSMUST00000033378 Trim30aP15533 496 aa22.86■■□□□ 1.25
Ebf3-201ENSMUST00000033378 Top2aQ01320 1528 aaKnown RBP22.86■■□□□ 1.25
Ebf3-201ENSMUST00000033378 Calcoco2A2A6M5 331 aa22.84■■□□□ 1.25
Ebf3-201ENSMUST00000033378 Anapc15P60007 132 aa22.84■■□□□ 1.25
Ebf3-201ENSMUST00000033378 Pdcl3Q8BVF2 240 aa22.83■■□□□ 1.25
Ebf3-201ENSMUST00000033378 Atl3Q91YH5 541 aa22.83■■□□□ 1.25
Ebf3-201ENSMUST00000033378 AampJ3QN89 436 aa22.83■■□□□ 1.24
Ebf3-201ENSMUST00000033378 Dhx29Q6PGC1 1365 aaKnown RBP22.82■■□□□ 1.24
Ebf3-201ENSMUST00000033378 Utp14aQ640M1 767 aaKnown RBP22.81■■□□□ 1.24
Ebf3-201ENSMUST00000033378 St18Q80TY4 1045 aa22.81■■□□□ 1.24
Ebf3-201ENSMUST00000033378 R3hcc1Q8BSI6 488 aa22.81■■□□□ 1.24
Ebf3-201ENSMUST00000033378 Shroom4Q1W617 1475 aa22.81■■□□□ 1.24
Ebf3-201ENSMUST00000033378 Filip1lQ6P6L0 1131 aa22.8■■□□□ 1.24
Ebf3-201ENSMUST00000033378 Plekhh1Q80TI1 1356 aa22.8■■□□□ 1.24
Ebf3-201ENSMUST00000033378 Cc2d2bA0A286YDU8 1405 aa22.79■■□□□ 1.24
Ebf3-201ENSMUST00000033378 Cspp1B2RX88 1205 aa22.79■■□□□ 1.24
Ebf3-201ENSMUST00000033378 Sf3a1Q8K4Z5 791 aaKnown RBP22.79■■□□□ 1.24
Ebf3-201ENSMUST00000033378 Glipr1l2Q9CQ35 332 aa22.77■■□□□ 1.24
Ebf3-201ENSMUST00000033378 Cux1P53564 1515 aa22.77■■□□□ 1.24
Ebf3-201ENSMUST00000033378 Cc2d2aQ8CFW7 1633 aa22.77■■□□□ 1.23
Ebf3-201ENSMUST00000033378 Cc2d1aQ8K1A6 943 aa22.75■■□□□ 1.23
Ebf3-201ENSMUST00000033378 Stk31Q99MW1 1018 aa22.75■■□□□ 1.23
Ebf3-201ENSMUST00000033378 Sox12Q04890 314 aa22.75■■□□□ 1.23
Ebf3-201ENSMUST00000033378 Tnpo1Q8BFY9 898 aaKnown RBP22.75■■□□□ 1.23
Ebf3-201ENSMUST00000033378 Ift140E9PY46 1464 aa22.75■■□□□ 1.23
Ebf3-201ENSMUST00000033378 Psme1P97371 249 aa22.74■■□□□ 1.23
Ebf3-201ENSMUST00000033378 Triml2E9PW10 424 aa22.73■■□□□ 1.23
Ebf3-201ENSMUST00000033378 Plekhg5Q66T02 1073 aa22.73■■□□□ 1.23
Ebf3-201ENSMUST00000033378 Ppp2r1aQ76MZ3 589 aa22.73■■□□□ 1.23
Ebf3-201ENSMUST00000033378 Arhgef5E9Q7D5 1581 aa22.72■■□□□ 1.23
Ebf3-201ENSMUST00000033378 Txndc2Q6P902 515 aa22.72■■□□□ 1.23
Ebf3-201ENSMUST00000033378 Fbxo2Q80UW2 297 aa22.72■■□□□ 1.23
Ebf3-201ENSMUST00000033378 Slc4a10Q5DTL9 1118 aa22.71■■□□□ 1.23
Ebf3-201ENSMUST00000033378 Ppp2r3aB2RXC8 1150 aa22.7■■□□□ 1.22
Ebf3-201ENSMUST00000033378 L3mbtl2P59178 703 aa22.7■■□□□ 1.22
Ebf3-201ENSMUST00000033378 IbspQ61711 324 aa22.7■■□□□ 1.22
Retrieved 100 of 22,080 RNA–protein pairs in 36.3 ms