RNA–Protein interactions for RNA: YOR230W

WTM1, Transcript of Transcriptional modulator, yeast

Gene WTM1, Length 1,314 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
WTM1	YOR230W	GLE1	Q12315	538 aa		4.8	□□□□□ -1.64
WTM1	YOR230W	SKT5	P34226	696 aa		4.79	□□□□□ -1.64
WTM1	YOR230W	PMU1	P36069	295 aa		4.79	□□□□□ -1.64
WTM1	YOR230W	END3	P39013	349 aa		4.79	□□□□□ -1.64
WTM1	YOR230W	PRP39	P39682	629 aa	Known RBP	4.79	□□□□□ -1.64
WTM1	YOR230W	PTI1	P39927	425 aa	Predicted RBP	4.79	□□□□□ -1.64
WTM1	YOR230W	LCP5	P40079	357 aa	Predicted RBP	4.79	□□□□□ -1.64
WTM1	YOR230W	LYS12	P40495	371 aa	Known RBP	4.79	□□□□□ -1.64
WTM1	YOR230W	YHC3	P47040	408 aa		4.79	□□□□□ -1.64
WTM1	YOR230W	AYT1	Q12226	474 aa		4.79	□□□□□ -1.64
WTM1	YOR230W	TPT1	Q12272	230 aa	Known RBP	4.79	□□□□□ -1.64
WTM1	YOR230W	HFA1	P32874	2273 aa		4.79	□□□□□ -1.64
WTM1	YOR230W	RPL20A	P0CX23	172 aa	Known RBP	4.78	□□□□□ -1.64
WTM1	YOR230W	RPL20B	P0CX24	172 aa	Predicted RBP	4.78	□□□□□ -1.64
WTM1	YOR230W	RPS16A	P0CX51	143 aa	Known RBP	4.78	□□□□□ -1.64
WTM1	YOR230W	RPS16B	P0CX52	143 aa	Known RBP	4.78	□□□□□ -1.64
WTM1	YOR230W	CLN3	P13365	580 aa		4.78	□□□□□ -1.64
WTM1	YOR230W	PUT3	P25502	979 aa	Predicted RBP	4.78	□□□□□ -1.64
WTM1	YOR230W	SRX1	P36077	127 aa		4.78	□□□□□ -1.64
WTM1	YOR230W	SWC5	P38326	303 aa		4.78	□□□□□ -1.64
WTM1	YOR230W	RPR2	P40571	144 aa		4.78	□□□□□ -1.64
WTM1	YOR230W	SFH5	P47008	294 aa		4.78	□□□□□ -1.64
WTM1	YOR230W	RRN9	P53437	365 aa		4.78	□□□□□ -1.64
WTM1	YOR230W	EGD1	Q02642	157 aa	Known RBP	4.78	□□□□□ -1.64
WTM1	YOR230W	SMP3	Q04174	516 aa		4.78	□□□□□ -1.64
WTM1	YOR230W	MYO5	Q04439	1219 aa	Known RBP	4.78	□□□□□ -1.64
WTM1	YOR230W	YOP1	Q12402	180 aa		4.78	□□□□□ -1.64
WTM1	YOR230W	CEX1	Q12453	761 aa		4.78	□□□□□ -1.64
WTM1	YOR230W	YIL002W-A	Q3E7Z5	69 aa		4.78	□□□□□ -1.64
WTM1	YOR230W	RPL15A	P05748	204 aa	Known RBP	4.77	□□□□□ -1.65
WTM1	YOR230W	PET123	P17558	318 aa		4.77	□□□□□ -1.65
WTM1	YOR230W	YCL068C	P25593	260 aa		4.77	□□□□□ -1.65
WTM1	YOR230W	SEC1	P30619	724 aa	Known RBP	4.77	□□□□□ -1.65
WTM1	YOR230W	TMT1	P32643	299 aa		4.77	□□□□□ -1.65
WTM1	YOR230W	BZZ1	P38822	633 aa		4.77	□□□□□ -1.65
WTM1	YOR230W	FAA2	P39518	744 aa		4.77	□□□□□ -1.65
WTM1	YOR230W	RIO2	P40160	425 aa	Known RBP	4.77	□□□□□ -1.65
WTM1	YOR230W	LOC1	P43586	204 aa	Predicted RBP	4.77	□□□□□ -1.65
WTM1	YOR230W	AIP1	P46680	615 aa	Known RBP	4.77	□□□□□ -1.65
WTM1	YOR230W	CAF40	P53829	373 aa		4.77	□□□□□ -1.65
WTM1	YOR230W	SPR6	Q01684	191 aa		4.77	□□□□□ -1.65
WTM1	YOR230W	YMR102C	Q03177	834 aa		4.77	□□□□□ -1.65
WTM1	YOR230W	YML122C	Q03207	126 aa		4.77	□□□□□ -1.65
WTM1	YOR230W	CAB5	Q03941	241 aa		4.77	□□□□□ -1.65
WTM1	YOR230W	BCH1	Q05029	724 aa		4.77	□□□□□ -1.65
WTM1	YOR230W	YLR413W	Q06689	675 aa		4.77	□□□□□ -1.65
WTM1	YOR230W	SNX3	Q08826	162 aa	Known RBP	4.77	□□□□□ -1.65
WTM1	YOR230W	MRPL23	Q12487	163 aa	Predicted RBP	4.77	□□□□□ -1.65
WTM1	YOR230W	YIL046W-A	Q3E7Z4	54 aa		4.77	□□□□□ -1.65
WTM1	YOR230W	POL2	P21951	2222 aa	Known RBP	4.76	□□□□□ -1.65
WTM1	YOR230W	COX4	P04037	155 aa		4.76	□□□□□ -1.65
WTM1	YOR230W	YLL053C	P0CD98	152 aa		4.76	□□□□□ -1.65
WTM1	YOR230W	ATR1	P13090	542 aa		4.76	□□□□□ -1.65
WTM1	YOR230W	CDC23	P16522	626 aa		4.76	□□□□□ -1.65
WTM1	YOR230W	CKI1	P20485	582 aa		4.76	□□□□□ -1.65
WTM1	YOR230W	RNA14	P25298	677 aa	Known RBP	4.76	□□□□□ -1.65
WTM1	YOR230W	RIB5	P38145	238 aa		4.76	□□□□□ -1.65
WTM1	YOR230W	YBR137W	P38276	179 aa		4.76	□□□□□ -1.65
WTM1	YOR230W	BAT1	P38891	393 aa	Known RBP	4.76	□□□□□ -1.65
WTM1	YOR230W	OST1	P41543	476 aa	Known RBP	4.76	□□□□□ -1.65
WTM1	YOR230W	PNC1	P53184	216 aa	Known RBP	4.76	□□□□□ -1.65
WTM1	YOR230W	YMR181C	Q03231	154 aa		4.76	□□□□□ -1.65
WTM1	YOR230W	CCE1	Q03702	353 aa		4.76	□□□□□ -1.65
WTM1	YOR230W	YMR111C	Q04461	462 aa	Predicted RBP	4.76	□□□□□ -1.65
WTM1	YOR230W	ECM18	Q04623	453 aa		4.76	□□□□□ -1.65
WTM1	YOR230W	ERP1	Q05359	219 aa	Known RBP	4.76	□□□□□ -1.65
WTM1	YOR230W	SMC5	Q08204	1093 aa		4.76	□□□□□ -1.65
WTM1	YOR230W	YDR262W	Q12331	272 aa		4.76	□□□□□ -1.65
WTM1	YOR230W	RRP12	Q12754	1228 aa	Known RBP	4.76	□□□□□ -1.65
WTM1	YOR230W	SSC1	P0CS90	654 aa	Known RBP	4.75	□□□□□ -1.65
WTM1	YOR230W	CAP2	P13517	287 aa		4.75	□□□□□ -1.65
WTM1	YOR230W	MAK31	P23059	88 aa		4.75	□□□□□ -1.65
WTM1	YOR230W	EXG1	P23776	448 aa	Known RBP	4.75	□□□□□ -1.65
WTM1	YOR230W	EFB1	P32471	206 aa	Known RBP	4.75	□□□□□ -1.65
WTM1	YOR230W	YEF1	P32622	495 aa		4.75	□□□□□ -1.65
WTM1	YOR230W	CHK1	P38147	527 aa		4.75	□□□□□ -1.65
WTM1	YOR230W	YDL186W	P48568	277 aa		4.75	□□□□□ -1.65
WTM1	YOR230W	RIB4	P50861	169 aa	Predicted RBP	4.75	□□□□□ -1.65
WTM1	YOR230W	RPN14	P53196	417 aa		4.75	□□□□□ -1.65
WTM1	YOR230W	DBP6	P53734	629 aa	Known RBP	4.75	□□□□□ -1.65
WTM1	YOR230W	MRPL35	Q06678	367 aa		4.75	□□□□□ -1.65
WTM1	YOR230W	RAX1	Q08760	435 aa		4.75	□□□□□ -1.65
WTM1	YOR230W	SET6	Q12529	373 aa		4.75	□□□□□ -1.65
WTM1	YOR230W	DDP1	Q99321	188 aa	Known RBP	4.75	□□□□□ -1.65
WTM1	YOR230W	YOR338W	Q99326	363 aa		4.75	□□□□□ -1.65
WTM1	YOR230W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
WTM1	YOR230W	RAD3	P06839	778 aa		4.74	□□□□□ -1.65
WTM1	YOR230W	YPS1	P32329	569 aa		4.74	□□□□□ -1.65
WTM1	YOR230W	VAM7	P32912	316 aa		4.74	□□□□□ -1.65
WTM1	YOR230W	YPT53	P36019	220 aa		4.74	□□□□□ -1.65
WTM1	YOR230W	MIX23	P38162	196 aa		4.74	□□□□□ -1.65
WTM1	YOR230W	RTC2	P38279	296 aa		4.74	□□□□□ -1.65
WTM1	YOR230W	WSC4	P38739	605 aa		4.74	□□□□□ -1.65
WTM1	YOR230W	RPH1	P39956	796 aa		4.74	□□□□□ -1.65
WTM1	YOR230W	GCD14	P46959	383 aa	Predicted RBP	4.74	□□□□□ -1.65
WTM1	YOR230W	ABM1	P47146	123 aa		4.74	□□□□□ -1.65
WTM1	YOR230W	HXT11	P54862	567 aa		4.74	□□□□□ -1.65
WTM1	YOR230W	SRL1	Q08673	210 aa		4.74	□□□□□ -1.65
WTM1	YOR230W	YPQ1	Q12010	308 aa		4.74	□□□□□ -1.65
WTM1	YOR230W	YKL068W-A	Q3E826	78 aa		4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms