RNA–Protein interactions for RNA: YMR293C

HER2, Transcript of Subunit of the trimeric GatFAB AmidoTransferase(AdT) complex, yeast

Gene HER2, Length 1,395 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HER2	YMR293C	HMX1	P32339	317 aa		4.28	□□□□□ -1.72
HER2	YMR293C	SSE1	P32589	693 aa	Known RBP	4.28	□□□□□ -1.72
HER2	YMR293C	BAT1	P38891	393 aa	Known RBP	4.28	□□□□□ -1.72
HER2	YMR293C	SEC9	P40357	651 aa		4.28	□□□□□ -1.72
HER2	YMR293C	CIN2	P46670	268 aa		4.28	□□□□□ -1.72
HER2	YMR293C	CTK3	P46963	296 aa	Predicted RBP	4.28	□□□□□ -1.72
HER2	YMR293C	SHE4	P51534	789 aa		4.28	□□□□□ -1.72
HER2	YMR293C	SHY1	P53266	389 aa		4.28	□□□□□ -1.72
HER2	YMR293C	PRM1	P53835	661 aa		4.28	□□□□□ -1.72
HER2	YMR293C	TMC1	Q08422	150 aa	Predicted RBP	4.28	□□□□□ -1.72
HER2	YMR293C	CKI1	P20485	582 aa		4.27	□□□□□ -1.73
HER2	YMR293C	AAT2	P23542	418 aa	Known RBP	4.27	□□□□□ -1.73
HER2	YMR293C	ECM8	P38246	354 aa		4.27	□□□□□ -1.73
HER2	YMR293C	OXA1	P39952	402 aa		4.27	□□□□□ -1.73
HER2	YMR293C	YER186C	P40101	306 aa		4.27	□□□□□ -1.73
HER2	YMR293C	YIL089W	P40500	205 aa		4.27	□□□□□ -1.73
HER2	YMR293C	YMR310C	Q04867	317 aa	Predicted RBP	4.27	□□□□□ -1.73
HER2	YMR293C	YNL208W	P40159	199 aa	Known RBP	4.27	□□□□□ -1.73
HER2	YMR293C	SKI8	Q02793	397 aa	Predicted RBP	4.27	□□□□□ -1.73
HER2	YMR293C	YET2	Q04210	160 aa		4.27	□□□□□ -1.73
HER2	YMR293C	YHC1	Q05900	231 aa	Known RBP	4.27	□□□□□ -1.73
HER2	YMR293C	YLH47	Q06493	454 aa		4.27	□□□□□ -1.73
HER2	YMR293C	MCT1	Q12283	360 aa		4.27	□□□□□ -1.73
HER2	YMR293C	RPS18A	P0CX55	146 aa	Known RBP	4.26	□□□□□ -1.73
HER2	YMR293C	RPS18B	P0CX56	146 aa	Predicted RBP	4.26	□□□□□ -1.73
HER2	YMR293C	ZUO1	P32527	433 aa	Known RBP	4.26	□□□□□ -1.73
HER2	YMR293C	OM14	P38325	134 aa		4.26	□□□□□ -1.73
HER2	YMR293C	LSM12	P38828	187 aa	Known RBP	4.26	□□□□□ -1.73
HER2	YMR293C	YGL039W	P53183	348 aa	Known RBP	4.26	□□□□□ -1.73
HER2	YMR293C	REX2	P54964	269 aa	Known RBP	4.26	□□□□□ -1.73
HER2	YMR293C	DET1	Q99288	334 aa	Known RBP	4.26	□□□□□ -1.73
HER2	YMR293C	LIN1	P38852	340 aa	Predicted RBP	4.25	□□□□□ -1.73
HER2	YMR293C	AIP1	P46680	615 aa	Known RBP	4.25	□□□□□ -1.73
HER2	YMR293C	YHC3	P47040	408 aa		4.25	□□□□□ -1.73
HER2	YMR293C	TIS11	P47977	285 aa		4.25	□□□□□ -1.73
HER2	YMR293C	TRF5	P48561	642 aa	Known RBP	4.25	□□□□□ -1.73
HER2	YMR293C	HST1	P53685	503 aa		4.25	□□□□□ -1.73
HER2	YMR293C	SMP3	Q04174	516 aa		4.25	□□□□□ -1.73
HER2	YMR293C	TRX1	P22217	103 aa	Known RBP	4.24	□□□□□ -1.73
HER2	YMR293C	MRPS5	P33759	307 aa		4.24	□□□□□ -1.73
HER2	YMR293C	YMR134W	P40207	237 aa		4.24	□□□□□ -1.73
HER2	YMR293C	LST7	P53237	242 aa		4.24	□□□□□ -1.73
HER2	YMR293C	PRO2	P54885	456 aa	Known RBP	4.24	□□□□□ -1.73
HER2	YMR293C	TSA2	Q04120	196 aa		4.24	□□□□□ -1.73
HER2	YMR293C	MGR3	Q04472	501 aa		4.24	□□□□□ -1.73
HER2	YMR293C	YBT1	P32386	1661 aa		4.24	□□□□□ -1.73
HER2	YMR293C	CAT8	P39113	1433 aa		4.23	□□□□□ -1.73
HER2	YMR293C	HXT2	P23585	541 aa		4.23	□□□□□ -1.73
HER2	YMR293C	MXR2	P25566	168 aa		4.23	□□□□□ -1.73
HER2	YMR293C	CDC50	P25656	391 aa		4.23	□□□□□ -1.73
HER2	YMR293C	PEX32	P38292	413 aa		4.23	□□□□□ -1.73
HER2	YMR293C	ATG7	P38862	630 aa		4.23	□□□□□ -1.73
HER2	YMR293C	BCK1	Q01389	1478 aa		4.22	□□□□□ -1.73
HER2	YMR293C	HEM4	P06174	275 aa		4.22	□□□□□ -1.73
HER2	YMR293C	GIT1	P25346	518 aa		4.22	□□□□□ -1.73
HER2	YMR293C	RPL16A	P26784	199 aa	Known RBP	4.22	□□□□□ -1.73
HER2	YMR293C	YKR015C	P36111	568 aa		4.22	□□□□□ -1.73
HER2	YMR293C	IST2	P38250	946 aa		4.22	□□□□□ -1.73
HER2	YMR293C	YHR182W	P38870	785 aa		4.22	□□□□□ -1.73
HER2	YMR293C	DFG10	P40526	253 aa		4.22	□□□□□ -1.73
HER2	YMR293C	NAT4	Q04751	285 aa		4.22	□□□□□ -1.73
HER2	YMR293C	YOL075C	Q08234	1294 aa		4.22	□□□□□ -1.73
HER2	YMR293C	YDL109C	Q12103	647 aa		4.22	□□□□□ -1.73
HER2	YMR293C	SFM1	Q12314	213 aa		4.22	□□□□□ -1.73
HER2	YMR293C	PDR11	P40550	1411 aa		4.21	□□□□□ -1.73
HER2	YMR293C	VMR1	P38735	1592 aa		4.21	□□□□□ -1.74
HER2	YMR293C	SRB2	P34162	210 aa		4.21	□□□□□ -1.74
HER2	YMR293C	ALP1	P38971	573 aa		4.21	□□□□□ -1.74
HER2	YMR293C	HEM14	P40012	539 aa		4.21	□□□□□ -1.74
HER2	YMR293C	VAC7	P53950	1165 aa		4.21	□□□□□ -1.74
HER2	YMR293C	MSC3	Q05812	728 aa		4.21	□□□□□ -1.74
HER2	YMR293C	REX3	Q12090	404 aa		4.21	□□□□□ -1.74
HER2	YMR293C	GLE1	Q12315	538 aa		4.21	□□□□□ -1.74
HER2	YMR293C	NUP188	P52593	1655 aa	Known RBP	4.21	□□□□□ -1.74
HER2	YMR293C	IML1	P47170	1584 aa		4.2	□□□□□ -1.74
HER2	YMR293C	PRB1	P09232	635 aa		4.2	□□□□□ -1.74
HER2	YMR293C	RPL23A	P0CX41	137 aa	Known RBP	4.2	□□□□□ -1.74
HER2	YMR293C	RPL23B	P0CX42	137 aa	Known RBP	4.2	□□□□□ -1.74
HER2	YMR293C	TIM17	P39515	158 aa		4.2	□□□□□ -1.74
HER2	YMR293C	ALD5	P40047	520 aa	Known RBP	4.2	□□□□□ -1.74
HER2	YMR293C	ARR1	Q06596	294 aa		4.2	□□□□□ -1.74
HER2	YMR293C	APC5	Q08683	685 aa		4.2	□□□□□ -1.74
HER2	YMR293C	SLM3	Q12093	417 aa		4.2	□□□□□ -1.74
HER2	YMR293C	ARF2	P19146	181 aa	Known RBP	4.19	□□□□□ -1.74
HER2	YMR293C	ZRC1	P20107	442 aa		4.19	□□□□□ -1.74
HER2	YMR293C	UTR1	P21373	530 aa		4.19	□□□□□ -1.74
HER2	YMR293C	DEP1	P31385	405 aa		4.19	□□□□□ -1.74
HER2	YMR293C	YPT35	P38815	214 aa	Known RBP	4.19	□□□□□ -1.74
HER2	YMR293C	RBG1	P39729	369 aa		4.19	□□□□□ -1.74
HER2	YMR293C	PRP38	Q00723	242 aa	Predicted RBP	4.19	□□□□□ -1.74
HER2	YMR293C	LIP2	Q06005	328 aa		4.19	□□□□□ -1.74
HER2	YMR293C	SPH1	Q06160	661 aa		4.19	□□□□□ -1.74
HER2	YMR293C	HIF1	Q12373	385 aa		4.19	□□□□□ -1.74
HER2	YMR293C	UBA3	Q99344	299 aa		4.19	□□□□□ -1.74
HER2	YMR293C	RAD1	P06777	1100 aa		4.18	□□□□□ -1.74
HER2	YMR293C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
HER2	YMR293C	POP2	P39008	433 aa		4.18	□□□□□ -1.74
HER2	YMR293C	PRP39	P39682	629 aa	Known RBP	4.18	□□□□□ -1.74
HER2	YMR293C	YCH1	P42937	148 aa		4.18	□□□□□ -1.74
HER2	YMR293C	YJR030C	P47101	745 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 77.4 ms