RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeastyeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS72YDR485C DET1Q99288 334 aaKnown RBP5.31□□□□□ -1.56
VPS72YDR485C VPS1P21576 704 aaKnown RBP5.31□□□□□ -1.56
VPS72YDR485C SNC1P31109 117 aa5.31□□□□□ -1.56
VPS72YDR485C MIC12P38341 106 aa5.31□□□□□ -1.56
VPS72YDR485C ERG28P40030 148 aa5.31□□□□□ -1.56
VPS72YDR485C QRI1P43123 477 aaKnown RBP5.31□□□□□ -1.56
VPS72YDR485C TIS11P47977 285 aa5.31□□□□□ -1.56
VPS72YDR485C RTC4P53850 401 aa5.31□□□□□ -1.56
VPS72YDR485C ALG11P53954 548 aaKnown RBP5.31□□□□□ -1.56
VPS72YDR485C ADH6Q04894 360 aaKnown RBP5.31□□□□□ -1.56
VPS72YDR485C YDR222WQ04925 415 aa5.31□□□□□ -1.56
VPS72YDR485C EDE1P34216 1381 aa5.31□□□□□ -1.56
VPS72YDR485C TPK3P05986 398 aa5.3□□□□□ -1.56
VPS72YDR485C YMC1P32331 307 aa5.3□□□□□ -1.56
VPS72YDR485C RPC17P47076 161 aa5.3□□□□□ -1.56
VPS72YDR485C SED5Q01590 340 aa5.3□□□□□ -1.56
VPS72YDR485C SKI8Q02793 397 aaPredicted RBP5.3□□□□□ -1.56
VPS72YDR485C YPL080CQ02826 108 aa5.3□□□□□ -1.56
VPS72YDR485C OST6Q03723 332 aa5.3□□□□□ -1.56
VPS72YDR485C BNA5Q05979 453 aa5.3□□□□□ -1.56
VPS72YDR485C BER1Q06688 274 aaKnown RBP5.3□□□□□ -1.56
VPS72YDR485C GAT3Q07928 141 aa5.3□□□□□ -1.56
VPS72YDR485C YOR387CQ08910 206 aa5.3□□□□□ -1.56
VPS72YDR485C RRI1Q12468 440 aa5.3□□□□□ -1.56
VPS72YDR485C RPL35AP0CX84 120 aaKnown RBP5.3□□□□□ -1.56
VPS72YDR485C RPL35BP0CX85 120 aaKnown RBP5.3□□□□□ -1.56
VPS72YDR485C TCP1P12612 559 aaKnown RBP5.3□□□□□ -1.56
VPS72YDR485C CKA2P19454 339 aa5.3□□□□□ -1.56
VPS72YDR485C RPL24BP24000 155 aaKnown RBP5.3□□□□□ -1.56
VPS72YDR485C YCR007CP25354 239 aa5.3□□□□□ -1.56
VPS72YDR485C VMA6P32366 345 aaKnown RBP5.3□□□□□ -1.56
VPS72YDR485C RTT101P47050 842 aa5.3□□□□□ -1.56
VPS72YDR485C CWC23P52868 283 aaPredicted RBP5.3□□□□□ -1.56
VPS72YDR485C FRE4P53746 719 aa5.3□□□□□ -1.56
VPS72YDR485C COS1P53822 381 aa5.3□□□□□ -1.56
VPS72YDR485C YNL247WP53852 767 aaKnown RBP5.3□□□□□ -1.56
VPS72YDR485C IVY1Q04934 453 aa5.3□□□□□ -1.56
VPS72YDR485C SSK1Q07084 712 aa5.3□□□□□ -1.56
VPS72YDR485C SNF8Q12483 233 aa5.3□□□□□ -1.56
VPS72YDR485C SAL1D6W196 494 aa5.29□□□□□ -1.56
VPS72YDR485C HEM15P16622 393 aa5.29□□□□□ -1.56
VPS72YDR485C ARF2P19146 181 aaKnown RBP5.29□□□□□ -1.56
VPS72YDR485C MKK1P32490 508 aa5.29□□□□□ -1.56
VPS72YDR485C LYS1P38998 373 aaRIP-Chip data5.29□□□□□ -1.56not detected
VPS72YDR485C RPM2Q02773 1202 aa5.29□□□□□ -1.56
VPS72YDR485C CSM3Q04659 317 aa5.29□□□□□ -1.56
VPS72YDR485C RTT103Q05543 409 aa5.29□□□□□ -1.56
VPS72YDR485C CDD1Q06549 142 aa5.29□□□□□ -1.56
VPS72YDR485C APC9Q12107 265 aa5.29□□□□□ -1.56
VPS72YDR485C PGK1P00560 416 aaKnown RBP5.29□□□□□ -1.56
VPS72YDR485C SAM50P53969 484 aa5.29□□□□□ -1.56
VPS72YDR485C ARP10Q04549 284 aa5.29□□□□□ -1.56
VPS72YDR485C AIM39Q08223 395 aa5.29□□□□□ -1.56
VPS72YDR485C PFA4Q12006 378 aa5.29□□□□□ -1.56
VPS72YDR485C YPQ1Q12010 308 aa5.29□□□□□ -1.56
VPS72YDR485C SET6Q12529 373 aa5.29□□□□□ -1.56
VPS72YDR485C YKL183C-AQ3E765 70 aa5.29□□□□□ -1.56
VPS72YDR485C NCB2Q92317 146 aa5.29□□□□□ -1.56
VPS72YDR485C SEY1Q99287 776 aa5.29□□□□□ -1.56
VPS72YDR485C LSB5P25369 354 aa5.28□□□□□ -1.56
VPS72YDR485C ERG9P29704 444 aa5.28□□□□□ -1.56
VPS72YDR485C YCR041WP37265 110 aa5.28□□□□□ -1.56
VPS72YDR485C HOC1P47124 396 aa5.28□□□□□ -1.56
VPS72YDR485C VBA1Q04301 562 aa5.28□□□□□ -1.56
VPS72YDR485C KRE28Q04431 385 aa5.28□□□□□ -1.56
VPS72YDR485C RDL1Q12305 139 aaKnown RBP5.28□□□□□ -1.56
VPS72YDR485C YOP1Q12402 180 aa5.28□□□□□ -1.56
VPS72YDR485C YLR111WQ12528 110 aa5.28□□□□□ -1.56
VPS72YDR485C CBF1P17106 351 aa5.28□□□□□ -1.56
VPS72YDR485C RPB8P20436 146 aa5.28□□□□□ -1.56
VPS72YDR485C GDH2P33327 1092 aaKnown RBP5.28□□□□□ -1.56
VPS72YDR485C PPZ2P33329 710 aa5.28□□□□□ -1.56
VPS72YDR485C GPX2P38143 162 aa5.28□□□□□ -1.56
VPS72YDR485C EGD2P38879 174 aaKnown RBP5.28□□□□□ -1.56
VPS72YDR485C DHH1P39517 506 aaKnown RBP5.28□□□□□ -1.56
VPS72YDR485C AZR1P50080 613 aa5.28□□□□□ -1.56
VPS72YDR485C MRPL50P53724 139 aa5.28□□□□□ -1.56
VPS72YDR485C HER2Q03557 464 aa5.28□□□□□ -1.56
VPS72YDR485C YMR206WQ03695 313 aa5.28□□□□□ -1.56
VPS72YDR485C SWF1Q04629 336 aa5.28□□□□□ -1.56
VPS72YDR485C SSC1P0CS90 654 aaKnown RBP5.27□□□□□ -1.57
VPS72YDR485C ATP7P30902 174 aa5.27□□□□□ -1.57
VPS72YDR485C SPS19P32573 292 aaKnown RBP5.27□□□□□ -1.57
VPS72YDR485C MNS1P32906 549 aa5.27□□□□□ -1.57
VPS72YDR485C LOS1P33418 1100 aaPredicted RBP5.27□□□□□ -1.57
VPS72YDR485C THI80P35202 319 aa5.27□□□□□ -1.57
VPS72YDR485C KDX1P36005 433 aa5.27□□□□□ -1.57
VPS72YDR485C RCK2P38623 610 aa5.27□□□□□ -1.57
VPS72YDR485C OSH3P38713 996 aaKnown RBP5.27□□□□□ -1.57
VPS72YDR485C YJL043WP47053 257 aa5.27□□□□□ -1.57
VPS72YDR485C ECL1P48235 211 aa5.27□□□□□ -1.57
VPS72YDR485C LIF1P53150 421 aa5.27□□□□□ -1.57
VPS72YDR485C NOP19P53317 196 aaPredicted RBP5.27□□□□□ -1.57
VPS72YDR485C ARK1P53974 638 aa5.27□□□□□ -1.57
VPS72YDR485C REX4Q08237 289 aa5.27□□□□□ -1.57
VPS72YDR485C ALE1Q08548 619 aa5.27□□□□□ -1.57
VPS72YDR485C HEM1P09950 548 aaPredicted RBP5.27□□□□□ -1.57
VPS72YDR485C HPR1P17629 752 aaKnown RBP5.27□□□□□ -1.57
VPS72YDR485C STE18P18852 110 aa5.27□□□□□ -1.57
VPS72YDR485C IES6P32617 166 aa5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms