RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C BTN2P53286 410 aa1.91□□□□□ -2.1
VPS35YJL154C MTQ1P53944 314 aa1.91□□□□□ -2.1
VPS35YJL154C YOR387CQ08910 206 aa1.91□□□□□ -2.1
VPS35YJL154C PGC1Q08959 321 aa1.91□□□□□ -2.1
VPS35YJL154C YRM1Q12340 786 aa1.91□□□□□ -2.1
VPS35YJL154C GEA1P47102 1408 aaPredicted RBP1.91□□□□□ -2.1
VPS35YJL154C CBS2P14905 389 aa1.91□□□□□ -2.1
VPS35YJL154C SMI1P32566 505 aa1.91□□□□□ -2.1
VPS35YJL154C YSC83P32792 385 aa1.91□□□□□ -2.1
VPS35YJL154C MNS1P32906 549 aa1.91□□□□□ -2.1
VPS35YJL154C SPT10P35208 640 aa1.91□□□□□ -2.1
VPS35YJL154C SNL1P40548 159 aa1.91□□□□□ -2.1
VPS35YJL154C TOS3P43637 560 aa1.91□□□□□ -2.1
VPS35YJL154C IMP4P53941 290 aaKnown RBP1.91□□□□□ -2.1
VPS35YJL154C NUP116Q02630 1113 aa1.91□□□□□ -2.1
VPS35YJL154C GLE1Q12315 538 aa1.91□□□□□ -2.1
VPS35YJL154C UTP20P35194 2493 aaKnown RBP1.91□□□□□ -2.1
VPS35YJL154C TRP1P00912 224 aa1.9□□□□□ -2.1
VPS35YJL154C OPI3P05375 206 aa1.9□□□□□ -2.1
VPS35YJL154C PET123P17558 318 aa1.9□□□□□ -2.1
VPS35YJL154C ITR1P30605 584 aa1.9□□□□□ -2.1
VPS35YJL154C LOS1P33418 1100 aaPredicted RBP1.9□□□□□ -2.1
VPS35YJL154C SKT5P34226 696 aa1.9□□□□□ -2.1
VPS35YJL154C KRE9P39005 276 aa1.9□□□□□ -2.1
VPS35YJL154C MPS2P53159 387 aa1.9□□□□□ -2.1
VPS35YJL154C RTT102P53330 157 aa1.9□□□□□ -2.1
VPS35YJL154C CWC25P53854 179 aaKnown RBP1.9□□□□□ -2.1
VPS35YJL154C HXT11P54862 567 aa1.9□□□□□ -2.1
VPS35YJL154C NDL1Q06568 189 aa1.9□□□□□ -2.1
VPS35YJL154C IPK1Q06667 281 aa1.9□□□□□ -2.1
VPS35YJL154C PEX27Q08580 376 aa1.9□□□□□ -2.1
VPS35YJL154C EAF3Q12432 401 aa1.9□□□□□ -2.1
VPS35YJL154C SPT15P13393 240 aaKnown RBP1.9□□□□□ -2.11
VPS35YJL154C RNA14P25298 677 aaKnown RBP1.9□□□□□ -2.11
VPS35YJL154C POP5P28005 173 aa1.9□□□□□ -2.11
VPS35YJL154C IME2P32581 645 aa1.9□□□□□ -2.11
VPS35YJL154C RGT1P32862 1170 aa1.9□□□□□ -2.11
VPS35YJL154C SPP381P38282 291 aaPredicted RBP1.9□□□□□ -2.11
VPS35YJL154C RNH1Q04740 348 aa1.9□□□□□ -2.11
VPS35YJL154C ECM7Q06200 448 aa1.9□□□□□ -2.11
VPS35YJL154C SKS1Q12505 502 aa1.9□□□□□ -2.11
VPS35YJL154C CFT1Q06632 1357 aaKnown RBP1.9□□□□□ -2.11
VPS35YJL154C ARO2P28777 376 aaKnown RBP1.9□□□□□ -2.11
VPS35YJL154C TIF5P38431 405 aaKnown RBP1.9□□□□□ -2.11
VPS35YJL154C YHR131CP38835 850 aa1.9□□□□□ -2.11
VPS35YJL154C HAC1P41546 238 aa1.9□□□□□ -2.11
VPS35YJL154C ADA2Q02336 434 aa1.9□□□□□ -2.11
VPS35YJL154C PRM6Q04705 352 aa1.9□□□□□ -2.11
VPS35YJL154C YLH47Q06493 454 aa1.9□□□□□ -2.11
VPS35YJL154C ASA1Q06822 443 aa1.9□□□□□ -2.11
VPS35YJL154C RAX1Q08760 435 aa1.9□□□□□ -2.11
VPS35YJL154C YSP2Q06681 1438 aa1.89□□□□□ -2.11
VPS35YJL154C SAC3P46674 1301 aa1.89□□□□□ -2.11
VPS35YJL154C STF1P01098 86 aa1.89□□□□□ -2.11
VPS35YJL154C NIP1P32497 812 aaKnown RBP1.89□□□□□ -2.11
VPS35YJL154C RAD5P32849 1169 aaPredicted RBP1.89□□□□□ -2.11
VPS35YJL154C YSW1P38280 609 aa1.89□□□□□ -2.11
VPS35YJL154C STP2P38704 541 aa1.89□□□□□ -2.11
VPS35YJL154C MLH1P38920 769 aa1.89□□□□□ -2.11
VPS35YJL154C YIL089WP40500 205 aa1.89□□□□□ -2.11
VPS35YJL154C YGR117CP53270 476 aa1.89□□□□□ -2.11
VPS35YJL154C ELP3Q02908 557 aaKnown RBP1.89□□□□□ -2.11
VPS35YJL154C HRI1Q05905 244 aaKnown RBP1.89□□□□□ -2.11
VPS35YJL154C YTH1Q06102 208 aaPredicted RBP1.89□□□□□ -2.11
VPS35YJL154C LOT6Q07923 191 aa1.89□□□□□ -2.11
VPS35YJL154C AHC1Q12433 566 aa1.89□□□□□ -2.11
VPS35YJL154C RRP36Q12481 300 aaPredicted RBP1.89□□□□□ -2.11
VPS35YJL154C NBL1Q3E7Y6 73 aa1.89□□□□□ -2.11
VPS35YJL154C PIS1P06197 220 aaKnown RBP1.89□□□□□ -2.11
VPS35YJL154C CAP2P13517 287 aa1.89□□□□□ -2.11
VPS35YJL154C TRX1P22217 103 aaKnown RBP1.89□□□□□ -2.11
VPS35YJL154C EXG1P23776 448 aaKnown RBP1.89□□□□□ -2.11
VPS35YJL154C ECM8P38246 354 aa1.89□□□□□ -2.11
VPS35YJL154C RTT105P40063 208 aa1.89□□□□□ -2.11
VPS35YJL154C RPA34P47006 233 aaPredicted RBP1.89□□□□□ -2.11
VPS35YJL154C MDE1P47095 244 aa1.89□□□□□ -2.11
VPS35YJL154C RAD17P48581 401 aa1.89□□□□□ -2.11
VPS35YJL154C PRM1P53835 661 aa1.89□□□□□ -2.11
VPS35YJL154C AQR1P53943 586 aa1.89□□□□□ -2.11
VPS35YJL154C SNT309Q06091 175 aaPredicted RBP1.89□□□□□ -2.11
VPS35YJL154C LDS2Q08218 356 aa1.89□□□□□ -2.11
VPS35YJL154C CUE5Q08412 411 aaKnown RBP1.89□□□□□ -2.11
VPS35YJL154C YOP1Q12402 180 aa1.89□□□□□ -2.11
VPS35YJL154C SUP35P05453 685 aaKnown RBP1.88□□□□□ -2.11
VPS35YJL154C DAL80P26343 269 aa1.88□□□□□ -2.11
VPS35YJL154C YEF1P32622 495 aa1.88□□□□□ -2.11
VPS35YJL154C ARC19P33204 171 aaKnown RBP1.88□□□□□ -2.11
VPS35YJL154C GEP4P38812 185 aa1.88□□□□□ -2.11
VPS35YJL154C BFR1P38934 470 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11 RIP-Chip
VPS35YJL154C POP2P39008 433 aa1.88□□□□□ -2.11
VPS35YJL154C JLP2P40206 208 aa1.88□□□□□ -2.11
VPS35YJL154C YGL242CP53066 181 aa1.88□□□□□ -2.11
VPS35YJL154C MRM2P53123 320 aa1.88□□□□□ -2.11
VPS35YJL154C CUE3P53137 624 aaKnown RBP1.88□□□□□ -2.11
VPS35YJL154C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
VPS35YJL154C URC2Q04411 772 aa1.88□□□□□ -2.11
VPS35YJL154C ARV1Q06541 321 aa1.88□□□□□ -2.11
VPS35YJL154C MDM36Q06820 579 aa1.88□□□□□ -2.11
VPS35YJL154C RUD3Q12234 484 aaKnown RBP1.88□□□□□ -2.11
VPS35YJL154C RNH203Q12338 110 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms