RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W TRA1P38811 3744 aa0.59□□□□□ -2.32
UTP20YBL004W BI2P03873 423 aa0.59□□□□□ -2.32
UTP20YBL004W STE7P06784 515 aa0.59□□□□□ -2.32
UTP20YBL004W AIM18P38884 321 aa0.59□□□□□ -2.32
UTP20YBL004W SNX4P47057 423 aa0.59□□□□□ -2.32
UTP20YBL004W RFX1P48743 811 aa0.59□□□□□ -2.32
UTP20YBL004W AVT4P50944 713 aa0.59□□□□□ -2.32
UTP20YBL004W MAL13P53338 473 aa0.59□□□□□ -2.32
UTP20YBL004W PGA2P53903 129 aa0.59□□□□□ -2.32
UTP20YBL004W AAT1Q01802 451 aa0.59□□□□□ -2.32
UTP20YBL004W YDR132CQ03900 495 aa0.59□□□□□ -2.32
UTP20YBL004W VBA4Q04602 768 aaKnown RBP0.59□□□□□ -2.32
UTP20YBL004W YPR022CQ12139 1133 aa0.59□□□□□ -2.32
UTP20YBL004W BI3Q9ZZW7 517 aa0.59□□□□□ -2.32
UTP20YBL004W TY1A-LR4P0C2I8 440 aaKnown RBP0.59□□□□□ -2.32
UTP20YBL004W TY1A-DR6P0CX70 440 aa0.59□□□□□ -2.32
UTP20YBL004W TY1A-ER1P0CX71 440 aa0.59□□□□□ -2.32
UTP20YBL004W TY1A-LR2P0CX72 440 aa0.59□□□□□ -2.32
UTP20YBL004W TY1A-PLP0CX73 440 aa0.59□□□□□ -2.32
UTP20YBL004W TY1A-JR1P0CX74 440 aa0.59□□□□□ -2.32
UTP20YBL004W TY1A-LR3P0CX75 440 aa0.59□□□□□ -2.32
UTP20YBL004W TY1A-ML2P0CX76 440 aa0.59□□□□□ -2.32
UTP20YBL004W PAD1P33751 242 aaKnown RBP RIP-Chip data0.59□□□□□ -2.32not detected
UTP20YBL004W YKL063CP35725 167 aa0.59□□□□□ -2.32
UTP20YBL004W PBP2P38151 413 aaKnown RBP RIP-Chip data0.59□□□□□ -2.32not detected
UTP20YBL004W ARO9P38840 513 aaPredicted RBP0.59□□□□□ -2.32
UTP20YBL004W YMR147WP40218 223 aaKnown RBP0.59□□□□□ -2.32
UTP20YBL004W GUS1P46655 708 aaKnown RBP RIP-Chip data0.59□□□□□ -2.32not detected
UTP20YBL004W MSY1P48527 492 aa0.59□□□□□ -2.32
UTP20YBL004W YGR054WP53235 642 aaKnown RBP0.59□□□□□ -2.32
UTP20YBL004W SPG3Q04398 127 aaPredicted RBP0.59□□□□□ -2.32
UTP20YBL004W YLR407WQ06070 228 aa0.59□□□□□ -2.32
UTP20YBL004W TDA5Q06417 326 aaKnown RBP0.59□□□□□ -2.32
UTP20YBL004W FRA1Q07825 749 aa0.59□□□□□ -2.32
UTP20YBL004W TY1A-GR1Q12085 440 aa0.59□□□□□ -2.32
UTP20YBL004W TY1A-PR3Q6Q5H1 440 aaKnown RBP0.59□□□□□ -2.32
UTP20YBL004W TY1A-OLQ92392 440 aaKnown RBP0.59□□□□□ -2.32
UTP20YBL004W RPL3P14126 387 aaKnown RBP0.59□□□□□ -2.32
UTP20YBL004W SCD5P34758 872 aa0.59□□□□□ -2.32
UTP20YBL004W TRR2P38816 342 aa0.59□□□□□ -2.32
UTP20YBL004W RIC1P40395 1056 aa0.59□□□□□ -2.32
UTP20YBL004W VHS2P40463 436 aa0.59□□□□□ -2.32
UTP20YBL004W HXT9P40885 567 aa0.59□□□□□ -2.32
UTP20YBL004W STP4Q07351 490 aa0.59□□□□□ -2.32
UTP20YBL004W CKI1P20485 582 aa0.58□□□□□ -2.32
UTP20YBL004W PAP1P29468 568 aaKnown RBP0.58□□□□□ -2.32
UTP20YBL004W FLO10P36170 1169 aa0.58□□□□□ -2.32
UTP20YBL004W PRE3P38624 215 aa0.58□□□□□ -2.32
UTP20YBL004W YGL176CP46945 554 aa0.58□□□□□ -2.32
UTP20YBL004W YJR149WP47177 404 aa0.58□□□□□ -2.32
UTP20YBL004W STB4P50104 949 aa0.58□□□□□ -2.32
UTP20YBL004W YDR179W-AQ03983 463 aa0.58□□□□□ -2.32
UTP20YBL004W CDC45Q08032 650 aa0.58□□□□□ -2.32
UTP20YBL004W MF(ALPHA)2P32435 120 aa0.58□□□□□ -2.32
UTP20YBL004W AIM26P32858 118 aa0.58□□□□□ -2.32
UTP20YBL004W SPC34P36131 295 aa0.58□□□□□ -2.32
UTP20YBL004W FAT1P38225 669 aa0.58□□□□□ -2.32
UTP20YBL004W OM14P38325 134 aa0.58□□□□□ -2.32
UTP20YBL004W COG3P40094 801 aa0.58□□□□□ -2.32
UTP20YBL004W PAC11P40960 533 aa0.58□□□□□ -2.32
UTP20YBL004W CIR1P42940 261 aa0.58□□□□□ -2.32
UTP20YBL004W YFL051CP43552 160 aa0.58□□□□□ -2.32
UTP20YBL004W RTA1P53047 317 aa0.58□□□□□ -2.32
UTP20YBL004W MDM34P53083 459 aa0.58□□□□□ -2.32
UTP20YBL004W IST1P53843 298 aaPredicted RBP0.58□□□□□ -2.32
UTP20YBL004W YPR174CQ06616 221 aaPredicted RBP0.58□□□□□ -2.32
UTP20YBL004W YOL019WQ08157 551 aa0.58□□□□□ -2.32
UTP20YBL004W ABP140Q08641 628 aaKnown RBP0.58□□□□□ -2.32
UTP20YBL004W MGR1P25573 417 aa0.58□□□□□ -2.32
UTP20YBL004W OMA1P36163 345 aa0.58□□□□□ -2.32
UTP20YBL004W SWC5P38326 303 aa0.58□□□□□ -2.32
UTP20YBL004W SMC2P38989 1170 aaKnown RBP0.58□□□□□ -2.32
UTP20YBL004W AXL1P40851 1208 aa0.58□□□□□ -2.32
UTP20YBL004W MAD2P40958 196 aa0.58□□□□□ -2.32
UTP20YBL004W YRB1P41920 201 aaKnown RBP0.58□□□□□ -2.32
UTP20YBL004W PFA3P42836 336 aa0.58□□□□□ -2.32
UTP20YBL004W YJL016WP47072 561 aa0.58□□□□□ -2.32
UTP20YBL004W LSG1P53145 640 aaKnown RBP0.58□□□□□ -2.32
UTP20YBL004W CUZ1P53899 274 aa0.58□□□□□ -2.32
UTP20YBL004W YLR042CQ07990 161 aa0.58□□□□□ -2.32
UTP20YBL004W TMC1Q08422 150 aaPredicted RBP0.58□□□□□ -2.32
UTP20YBL004W SOG2Q08817 791 aa0.58□□□□□ -2.32
UTP20YBL004W RPS17AP02407 136 aaKnown RBP0.58□□□□□ -2.32
UTP20YBL004W RPS17BP14127 136 aaKnown RBP0.58□□□□□ -2.32
UTP20YBL004W KSS1P14681 368 aa0.58□□□□□ -2.32
UTP20YBL004W SRB2P34162 210 aa0.58□□□□□ -2.32
UTP20YBL004W TFA2P36145 328 aa0.58□□□□□ -2.32
UTP20YBL004W YBR056WP38081 501 aa0.58□□□□□ -2.32
UTP20YBL004W ROT2P38138 954 aa0.58□□□□□ -2.32
UTP20YBL004W YIL092WP40497 633 aa0.58□□□□□ -2.32
UTP20YBL004W YJL218WP40892 196 aaKnown RBP0.58□□□□□ -2.32
UTP20YBL004W GLR1P41921 483 aaKnown RBP0.58□□□□□ -2.32
UTP20YBL004W ISU1Q03020 165 aa0.58□□□□□ -2.32
UTP20YBL004W YCS4Q06156 1176 aa0.58□□□□□ -2.32
UTP20YBL004W RDS3Q06835 107 aaPredicted RBP0.58□□□□□ -2.32
UTP20YBL004W PEX15Q08215 383 aa0.58□□□□□ -2.32
UTP20YBL004W AAD15Q08361 143 aa0.58□□□□□ -2.32
UTP20YBL004W PRE9P23638 258 aaKnown RBP0.58□□□□□ -2.32
UTP20YBL004W LRE1P25579 583 aaKnown RBP0.58□□□□□ -2.32
UTP20YBL004W PRX1P34227 261 aaKnown RBP0.58□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms