RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YIR043C	YIR043C	TIM18	Q08749	192 aa		4.99	□□□□□ -1.61
YIR043C	YIR043C	TEF1	P02994	458 aa	Known RBP	4.98	□□□□□ -1.61
YIR043C	YIR043C	SAM1	P10659	382 aa	Known RBP	4.98	□□□□□ -1.61
YIR043C	YIR043C	TAL1	P15019	335 aa	Known RBP	4.98	□□□□□ -1.61
YIR043C	YIR043C	SAM2	P19358	384 aa	Known RBP	4.98	□□□□□ -1.61
YIR043C	YIR043C	TIP1	P27654	210 aa	Predicted RBP	4.98	□□□□□ -1.61
YIR043C	YIR043C	MTC4	P38335	694 aa	Known RBP	4.98	□□□□□ -1.61
YIR043C	YIR043C	PAC11	P40960	533 aa		4.98	□□□□□ -1.61
YIR043C	YIR043C	SHE4	P51534	789 aa		4.98	□□□□□ -1.61
YIR043C	YIR043C	YNR048W	P53740	393 aa		4.98	□□□□□ -1.61
YIR043C	YIR043C	YNR068C	P53754	272 aa		4.98	□□□□□ -1.61
YIR043C	YIR043C	UTP6	Q02354	440 aa	Known RBP	4.98	□□□□□ -1.61
YIR043C	YIR043C	MMT1	Q03218	510 aa		4.98	□□□□□ -1.61
YIR043C	YIR043C	PKH2	Q12236	1081 aa	Known RBP	4.98	□□□□□ -1.61
YIR043C	YIR043C	RGT2	Q12300	763 aa		4.98	□□□□□ -1.61
YIR043C	YIR043C	RMD5	Q12508	421 aa		4.98	□□□□□ -1.61
YIR043C	YIR043C	NBL1	Q3E7Y6	73 aa		4.98	□□□□□ -1.61
YIR043C	YIR043C	STE3	P06783	470 aa		4.97	□□□□□ -1.61
YIR043C	YIR043C	SPO12	P17123	173 aa		4.97	□□□□□ -1.61
YIR043C	YIR043C	PES4	P39684	611 aa		4.97	□□□□□ -1.61
YIR043C	YIR043C	RTT101	P47050	842 aa		4.97	□□□□□ -1.61
YIR043C	YIR043C	ECM7	Q06200	448 aa		4.97	□□□□□ -1.61
YIR043C	YIR043C	YPL199C	Q08954	240 aa		4.97	□□□□□ -1.61
YIR043C	YIR043C	RNH203	Q12338	110 aa		4.97	□□□□□ -1.61
YIR043C	YIR043C	OPI3	P05375	206 aa		4.96	□□□□□ -1.62
YIR043C	YIR043C	MRS3	P10566	314 aa		4.96	□□□□□ -1.62
YIR043C	YIR043C	PRP16	P15938	1071 aa	Predicted RBP	4.96	□□□□□ -1.62
YIR043C	YIR043C	SLM5	P25345	492 aa	Known RBP	4.96	□□□□□ -1.62
YIR043C	YIR043C	ITR1	P30605	584 aa		4.96	□□□□□ -1.62
YIR043C	YIR043C	SKN1	P33336	771 aa		4.96	□□□□□ -1.62
YIR043C	YIR043C	DHH1	P39517	506 aa	Known RBP	4.96	□□□□□ -1.62
YIR043C	YIR043C	MMF1	P40185	145 aa	Known RBP	4.96	□□□□□ -1.62
YIR043C	YIR043C	LAM5	P43560	674 aa		4.96	□□□□□ -1.62
YIR043C	YIR043C	RRT5	P43607	289 aa		4.96	□□□□□ -1.62
YIR043C	YIR043C	SSN8	P47821	323 aa		4.96	□□□□□ -1.62
YIR043C	YIR043C	MPS1	P54199	764 aa		4.96	□□□□□ -1.62
YIR043C	YIR043C	MRP51	Q02950	344 aa		4.96	□□□□□ -1.62
YIR043C	YIR043C	AYT1	Q12226	474 aa		4.96	□□□□□ -1.62
YIR043C	YIR043C	HIF1	Q12373	385 aa		4.96	□□□□□ -1.62
YIR043C	YIR043C	RPL20A	P0CX23	172 aa	Known RBP	4.95	□□□□□ -1.62
YIR043C	YIR043C	RPL20B	P0CX24	172 aa	Predicted RBP	4.95	□□□□□ -1.62
YIR043C	YIR043C	RDS1	P25611	832 aa		4.95	□□□□□ -1.62
YIR043C	YIR043C	SEC1	P30619	724 aa	Known RBP	4.95	□□□□□ -1.62
YIR043C	YIR043C	ATS1	P31386	333 aa		4.95	□□□□□ -1.62
YIR043C	YIR043C	RGT1	P32862	1170 aa		4.95	□□□□□ -1.62
YIR043C	YIR043C	PMU1	P36069	295 aa		4.95	□□□□□ -1.62
YIR043C	YIR043C	YBL028C	P38202	106 aa		4.95	□□□□□ -1.62
YIR043C	YIR043C	MST28	P39552	234 aa		4.95	□□□□□ -1.62
YIR043C	YIR043C	RTT102	P53330	157 aa		4.95	□□□□□ -1.62
YIR043C	YIR043C	PRM1	P53835	661 aa		4.95	□□□□□ -1.62
YIR043C	YIR043C	HCR1	Q05775	265 aa	Known RBP	4.95	□□□□□ -1.62
YIR043C	YIR043C	RRP9	Q06506	573 aa	Known RBP	4.95	□□□□□ -1.62
YIR043C	YIR043C	YAP7	Q08182	245 aa		4.95	□□□□□ -1.62
YIR043C	YIR043C	SFG1	Q12507	346 aa		4.95	□□□□□ -1.62
YIR043C	YIR043C	CDC23	P16522	626 aa		4.94	□□□□□ -1.62
YIR043C	YIR043C	YKL097C	P34245	136 aa		4.94	□□□□□ -1.62
YIR043C	YIR043C	MSG5	P38590	489 aa		4.94	□□□□□ -1.62
YIR043C	YIR043C	EFM3	P47163	339 aa		4.94	□□□□□ -1.62
YIR043C	YIR043C	MPS2	P53159	387 aa		4.94	□□□□□ -1.62
YIR043C	YIR043C	NUP53	Q03790	475 aa		4.94	□□□□□ -1.62
YIR043C	YIR043C	URC2	Q04411	772 aa		4.94	□□□□□ -1.62
YIR043C	YIR043C	SRL2	Q12020	392 aa		4.94	□□□□□ -1.62
YIR043C	YIR043C	DAP1	Q12091	152 aa		4.94	□□□□□ -1.62
YIR043C	YIR043C	SET6	Q12529	373 aa		4.94	□□□□□ -1.62
YIR043C	YIR043C	RPL15A	P05748	204 aa	Known RBP	4.93	□□□□□ -1.62
YIR043C	YIR043C	PSO2	P30620	661 aa		4.93	□□□□□ -1.62
YIR043C	YIR043C	PTK1	P36002	662 aa	Predicted RBP	4.93	□□□□□ -1.62
YIR043C	YIR043C	ATP3	P38077	311 aa	Known RBP	4.93	□□□□□ -1.62
YIR043C	YIR043C	YHR177W	P38867	453 aa		4.93	□□□□□ -1.62
YIR043C	YIR043C	OSW5	P40219	148 aa		4.93	□□□□□ -1.62
YIR043C	YIR043C	RPR2	P40571	144 aa		4.93	□□□□□ -1.62
YIR043C	YIR043C	YFR016C	P43597	1233 aa	Known RBP	4.93	□□□□□ -1.62
YIR043C	YIR043C	PMT5	P52867	743 aa		4.93	□□□□□ -1.62
YIR043C	YIR043C	AAD15	Q08361	143 aa		4.93	□□□□□ -1.62
YIR043C	YIR043C	PEX27	Q08580	376 aa		4.93	□□□□□ -1.62
YIR043C	YIR043C	RPL12A	P0CX53	165 aa	Known RBP	4.92	□□□□□ -1.62
YIR043C	YIR043C	RPL12B	P0CX54	165 aa		4.92	□□□□□ -1.62
YIR043C	YIR043C	ATR1	P13090	542 aa		4.92	□□□□□ -1.62
YIR043C	YIR043C	SLY1	P22213	666 aa		4.92	□□□□□ -1.62
YIR043C	YIR043C	PUT3	P25502	979 aa	Predicted RBP	4.92	□□□□□ -1.62
YIR043C	YIR043C	SUR1	P33300	382 aa		4.92	□□□□□ -1.62
YIR043C	YIR043C	SRB2	P34162	210 aa		4.92	□□□□□ -1.62
YIR043C	YIR043C	KKQ8	P36004	724 aa		4.92	□□□□□ -1.62
YIR043C	YIR043C	RIB5	P38145	238 aa		4.92	□□□□□ -1.62
YIR043C	YIR043C	GPI8	P49018	411 aa		4.92	□□□□□ -1.62
YIR043C	YIR043C	HST1	P53685	503 aa		4.92	□□□□□ -1.62
YIR043C	YIR043C	CAF40	P53829	373 aa		4.92	□□□□□ -1.62
YIR043C	YIR043C	YPL068C	Q02749	293 aa		4.92	□□□□□ -1.62
YIR043C	YIR043C	YML122C	Q03207	126 aa		4.92	□□□□□ -1.62
YIR043C	YIR043C	SMA2	Q04658	369 aa		4.92	□□□□□ -1.62
YIR043C	YIR043C	NOP6	Q07623	225 aa	Known RBP	4.92	□□□□□ -1.62
YIR043C	YIR043C	YOR012W	Q12351	137 aa		4.92	□□□□□ -1.62
YIR043C	YIR043C	SAG1	P20840	650 aa		4.91	□□□□□ -1.62
YIR043C	YIR043C	COX13	P32799	129 aa		4.91	□□□□□ -1.62
YIR043C	YIR043C	RPH1	P39956	796 aa		4.91	□□□□□ -1.62
YIR043C	YIR043C	ATM1	P40416	690 aa		4.91	□□□□□ -1.62
YIR043C	YIR043C	AZR1	P50080	613 aa		4.91	□□□□□ -1.62
YIR043C	YIR043C	MGR3	Q04472	501 aa		4.91	□□□□□ -1.62
YIR043C	YIR043C	ERP1	Q05359	219 aa	Known RBP	4.91	□□□□□ -1.62
YIR043C	YIR043C	AFT2	Q08957	416 aa		4.91	□□□□□ -1.62

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