RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C DRS1P32892 752 aaKnown RBP15.6■□□□□ 0.09
YIR043CYIR043C MTC1P47018 478 aaKnown RBP14.91□□□□□ -0.02
YIR043CYIR043C BFR2Q06631 534 aaKnown RBP13.75□□□□□ -0.21
YIR043CYIR043C TFA1P36100 482 aa13.28□□□□□ -0.28
YIR043CYIR043C DIP2Q12220 943 aaPredicted RBP13.07□□□□□ -0.32
YIR043CYIR043C AVT3P36062 692 aa13.01□□□□□ -0.33
YIR043CYIR043C RSE1Q04693 1361 aaKnown RBP12.18□□□□□ -0.46
YIR043CYIR043C ISW2Q08773 1120 aa12.01□□□□□ -0.49
YIR043CYIR043C RQC2Q12532 1038 aaKnown RBP11.9□□□□□ -0.5
YIR043CYIR043C RPG1P38249 964 aaKnown RBP11.85□□□□□ -0.51
YIR043CYIR043C RPL17AP05740 184 aaKnown RBP11.71□□□□□ -0.53
YIR043CYIR043C RPL17BP46990 184 aaKnown RBP11.71□□□□□ -0.53
YIR043CYIR043C FAP1P53971 965 aa11.65□□□□□ -0.54
YIR043CYIR043C PRI1P10363 409 aa11.64□□□□□ -0.55
YIR043CYIR043C REB1P21538 810 aa11.52□□□□□ -0.57
YIR043CYIR043C AAD16Q02895 342 aa11.38□□□□□ -0.59
YIR043CYIR043C PTP3P40048 928 aa11.29□□□□□ -0.6
YIR043CYIR043C RIM101P33400 625 aa11.25□□□□□ -0.61
YIR043CYIR043C SPT21P35209 758 aa11.25□□□□□ -0.61
YIR043CYIR043C DMA1P38823 416 aa11.21□□□□□ -0.61
YIR043CYIR043C TSR3Q12094 313 aaKnown RBP11.14□□□□□ -0.63
YIR043CYIR043C SSP1P38871 571 aa11.03□□□□□ -0.64
YIR043CYIR043C OXP1P28273 1286 aa10.93□□□□□ -0.66
YIR043CYIR043C YAH1Q12184 172 aaKnown RBP10.9□□□□□ -0.66
YIR043CYIR043C PRY3P47033 881 aa10.85□□□□□ -0.67
YIR043CYIR043C YIL055CP40523 627 aaKnown RBP10.81□□□□□ -0.68
YIR043CYIR043C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.8□□□□□ -0.68not detected
YIR043CYIR043C YKR023WP36119 530 aaKnown RBP10.78□□□□□ -0.68
YIR043CYIR043C YLR271WQ06152 274 aa10.72□□□□□ -0.69
YIR043CYIR043C MRPL32P25348 183 aa10.69□□□□□ -0.7
YIR043CYIR043C RSM7P47150 247 aa10.61□□□□□ -0.71
YIR043CYIR043C HOP09932 586 aa10.6□□□□□ -0.71
YIR043CYIR043C TFC8Q12308 588 aa10.56□□□□□ -0.72
YIR043CYIR043C MGA2P40578 1113 aa10.55□□□□□ -0.72
YIR043CYIR043C DCD1P06773 312 aa10.52□□□□□ -0.73
YIR043CYIR043C TAF7Q05021 590 aa10.49□□□□□ -0.73
YIR043CYIR043C CST9Q06032 482 aa10.44□□□□□ -0.74
YIR043CYIR043C LEO1P38439 464 aa10.43□□□□□ -0.74
YIR043CYIR043C CDC27P38042 758 aa10.42□□□□□ -0.74
YIR043CYIR043C AI2P03876 854 aa10.39□□□□□ -0.75
YIR043CYIR043C PSD2P53037 1138 aaKnown RBP10.35□□□□□ -0.75
YIR043CYIR043C SAS10Q12136 610 aaPredicted RBP10.35□□□□□ -0.75
YIR043CYIR043C BCH2P36122 765 aa10.29□□□□□ -0.76
YIR043CYIR043C BBC1P47068 1157 aa10.29□□□□□ -0.76
YIR043CYIR043C YCK3P39962 524 aa10.23□□□□□ -0.77
YIR043CYIR043C HAA1Q12753 694 aaKnown RBP10.23□□□□□ -0.77
YIR043CYIR043C LEU3P08638 886 aa10.22□□□□□ -0.77
YIR043CYIR043C EPS1P40557 701 aa10.16□□□□□ -0.78
YIR043CYIR043C RAM2P29703 316 aa10.12□□□□□ -0.79
YIR043CYIR043C MRM1P25270 412 aa10.11□□□□□ -0.79
YIR043CYIR043C BDF1P35817 686 aa10.07□□□□□ -0.8
YIR043CYIR043C SET1P38827 1080 aaKnown RBP10.04□□□□□ -0.8
YIR043CYIR043C RCR1P38212 213 aa10.03□□□□□ -0.8
YIR043CYIR043C SCY1P53009 804 aa10.03□□□□□ -0.8
YIR043CYIR043C RTG3P38165 486 aa10□□□□□ -0.81
YIR043CYIR043C SPB4P25808 606 aaPredicted RBP9.96□□□□□ -0.82
YIR043CYIR043C VPS70P47161 811 aa9.96□□□□□ -0.82
YIR043CYIR043C RPN1P38764 993 aaKnown RBP9.95□□□□□ -0.82
YIR043CYIR043C MAP2P38174 421 aaKnown RBP9.92□□□□□ -0.82
YIR043CYIR043C CKB1P43639 278 aa9.92□□□□□ -0.82
YIR043CYIR043C YPR148CQ06523 435 aa9.92□□□□□ -0.82
YIR043CYIR043C IFH1P39520 1085 aa9.9□□□□□ -0.82
YIR043CYIR043C MAK11P20484 414 aaKnown RBP9.89□□□□□ -0.83
YIR043CYIR043C UBP10P53874 792 aaPredicted RBP9.89□□□□□ -0.83
YIR043CYIR043C VPS29P38759 282 aa9.82□□□□□ -0.84
YIR043CYIR043C SLX5P32828 619 aaKnown RBP9.79□□□□□ -0.84
YIR043CYIR043C DMA2P53924 522 aa9.79□□□□□ -0.84
YIR043CYIR043C COQ8P27697 501 aa9.78□□□□□ -0.84
YIR043CYIR043C YGL015CP33199 130 aa9.77□□□□□ -0.85
YIR043CYIR043C PBS2P08018 668 aa9.73□□□□□ -0.85
YIR043CYIR043C MIF2P35201 549 aa9.71□□□□□ -0.86
YIR043CYIR043C YMR1P47147 688 aaKnown RBP RIP-Chip data9.71□□□□□ -0.86not detected
YIR043CYIR043C DSF2P38213 736 aa9.7□□□□□ -0.86
YIR043CYIR043C YFR006WP43590 535 aa9.67□□□□□ -0.86
YIR043CYIR043C STS1P38637 319 aa9.66□□□□□ -0.86
YIR043CYIR043C NOP53Q12080 455 aaKnown RBP9.66□□□□□ -0.86
YIR043CYIR043C DBP1P24784 617 aaKnown RBP9.65□□□□□ -0.86
YIR043CYIR043C EDS1P38073 919 aa9.64□□□□□ -0.87
YIR043CYIR043C REF2P42073 533 aaPredicted RBP9.61□□□□□ -0.87
YIR043CYIR043C YNR021WP53723 404 aaKnown RBP9.6□□□□□ -0.87
YIR043CYIR043C YOR238WQ08634 303 aa9.6□□□□□ -0.87
YIR043CYIR043C MAM3Q12296 706 aa9.6□□□□□ -0.87
YIR043CYIR043C KIN1P13185 1064 aa9.57□□□□□ -0.88
YIR043CYIR043C IES2P40154 320 aa9.56□□□□□ -0.88
YIR043CYIR043C GLC3P32775 704 aa9.54□□□□□ -0.88
YIR043CYIR043C PTC3P34221 468 aaKnown RBP9.54□□□□□ -0.88
YIR043CYIR043C PIB1Q06651 286 aa9.51□□□□□ -0.89
YIR043CYIR043C TIF4632P39936 914 aaKnown RBP9.5□□□□□ -0.89
YIR043CYIR043C DIT2P21595 489 aa9.49□□□□□ -0.89
YIR043CYIR043C NUP42P49686 430 aaKnown RBP9.48□□□□□ -0.89
YIR043CYIR043C AIM7Q12156 149 aa9.47□□□□□ -0.89
YIR043CYIR043C MAK21Q12176 1025 aaKnown RBP9.47□□□□□ -0.89
YIR043CYIR043C RLF2Q12495 606 aa9.46□□□□□ -0.9
YIR043CYIR043C COX6P00427 148 aa9.45□□□□□ -0.9
YIR043CYIR043C YAP5P40574 245 aa9.45□□□□□ -0.9
YIR043CYIR043C ABP1P15891 592 aaKnown RBP9.43□□□□□ -0.9
YIR043CYIR043C NSR1P27476 414 aaKnown RBP RIP-Chip data9.43□□□□□ -0.9not detected
YIR043CYIR043C VMA1P17255 1071 aaKnown RBP9.41□□□□□ -0.9
YIR043CYIR043C ATF2P53296 535 aa9.41□□□□□ -0.9
YIR043CYIR043C VHR2P40041 505 aa9.4□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 1115.4 ms