RNA–Protein interactions for RNA: YGR002C

SWC4, Transcript of Component of the Swr1p complex that incorporates Htz1p into chromatin, yeastyeast

Gene SWC4, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC4YGR002C OPY1P38271 328 aa2.85□□□□□ -1.95
SWC4YGR002C YRB2P40517 327 aa2.85□□□□□ -1.95
SWC4YGR002C LOC1P43586 204 aaPredicted RBP2.85□□□□□ -1.95
SWC4YGR002C EGD1Q02642 157 aaKnown RBP2.85□□□□□ -1.95
SWC4YGR002C HOT1Q03213 719 aa2.85□□□□□ -1.95
SWC4YGR002C SYF1Q04048 859 aaPredicted RBP2.85□□□□□ -1.95
SWC4YGR002C SPC2Q04969 178 aa2.85□□□□□ -1.95
SWC4YGR002C BCP1Q06338 283 aa2.85□□□□□ -1.95
SWC4YGR002C RIM20Q12033 661 aa2.85□□□□□ -1.95
SWC4YGR002C YDL007C-AQ2V2Q0 85 aa2.85□□□□□ -1.95
SWC4YGR002C RAV1P47104 1357 aa2.85□□□□□ -1.95
SWC4YGR002C ECM5Q03214 1411 aa2.85□□□□□ -1.95
SWC4YGR002C YRF1-4O13559 1382 aa2.85□□□□□ -1.95
SWC4YGR002C MES1P00958 751 aaKnown RBP2.85□□□□□ -1.95
SWC4YGR002C MTF1P14908 341 aaKnown RBP2.85□□□□□ -1.95
SWC4YGR002C YCR007CP25354 239 aa2.85□□□□□ -1.95
SWC4YGR002C RDS1P25611 832 aa2.85□□□□□ -1.95
SWC4YGR002C KRE2P27809 442 aa2.85□□□□□ -1.95
SWC4YGR002C ATS1P31386 333 aa2.85□□□□□ -1.95
SWC4YGR002C MAK5P38112 773 aaPredicted RBP2.85□□□□□ -1.95
SWC4YGR002C DUG2P38149 878 aa2.85□□□□□ -1.95
SWC4YGR002C GDT1P38301 280 aaPredicted RBP2.85□□□□□ -1.95
SWC4YGR002C MBB1P39534 108 aa2.85□□□□□ -1.95
SWC4YGR002C SNZ3P43545 298 aa2.85□□□□□ -1.95
SWC4YGR002C ROK1P45818 564 aaPredicted RBP2.85□□□□□ -1.95
SWC4YGR002C KAP114P53067 1004 aa2.85□□□□□ -1.95
SWC4YGR002C RPN14P53196 417 aa2.85□□□□□ -1.95
SWC4YGR002C SNZ2P53824 298 aa2.85□□□□□ -1.95
SWC4YGR002C TOF1P53840 1238 aa2.85□□□□□ -1.95
SWC4YGR002C RMT2Q03305 412 aa2.85□□□□□ -1.95
SWC4YGR002C TAF11Q04226 346 aa2.85□□□□□ -1.95
SWC4YGR002C KRE28Q04431 385 aa2.85□□□□□ -1.95
SWC4YGR002C ARR2Q06597 130 aa2.85□□□□□ -1.95
SWC4YGR002C VAC14Q06708 880 aa2.85□□□□□ -1.95
SWC4YGR002C ATG29Q12092 213 aa2.85□□□□□ -1.95
SWC4YGR002C BUG1Q12191 341 aa2.85□□□□□ -1.95
SWC4YGR002C YDL009CQ12210 107 aa2.85□□□□□ -1.95
SWC4YGR002C MDY2Q12285 212 aa2.85□□□□□ -1.95
SWC4YGR002C YMR230W-AQ3E7B5 62 aa2.85□□□□□ -1.95
SWC4YGR002C CFT1Q06632 1357 aaKnown RBP2.84□□□□□ -1.96
SWC4YGR002C SUC2P00724 532 aa2.84□□□□□ -1.96
SWC4YGR002C PAB1P04147 577 aaKnown RBP RIP-Chip data2.84□□□□□ -1.96not detected
SWC4YGR002C RPL15AP05748 204 aaKnown RBP2.84□□□□□ -1.96
SWC4YGR002C AMD1P15274 810 aaKnown RBP2.84□□□□□ -1.96
SWC4YGR002C DPB2P24482 689 aaPredicted RBP2.84□□□□□ -1.96
SWC4YGR002C YCR016WP25617 290 aaKnown RBP2.84□□□□□ -1.96
SWC4YGR002C HMX1P32339 317 aa2.84□□□□□ -1.96
SWC4YGR002C YEL043WP32618 956 aa2.84□□□□□ -1.96
SWC4YGR002C VPS51P36116 164 aa2.84□□□□□ -1.96
SWC4YGR002C VID24P38263 362 aa2.84□□□□□ -1.96
SWC4YGR002C PEX32P38292 413 aa2.84□□□□□ -1.96
SWC4YGR002C MSG5P38590 489 aa2.84□□□□□ -1.96
SWC4YGR002C RTC3P38804 111 aaPredicted RBP2.84□□□□□ -1.96
SWC4YGR002C CIN5P40917 295 aa2.84□□□□□ -1.96
SWC4YGR002C RTT101P47050 842 aa2.84□□□□□ -1.96
SWC4YGR002C SNX4P47057 423 aa2.84□□□□□ -1.96
SWC4YGR002C MIG2P53035 382 aa2.84□□□□□ -1.96
SWC4YGR002C TWF1P53250 332 aa2.84□□□□□ -1.96
SWC4YGR002C GPI1P53306 609 aa2.84□□□□□ -1.96
SWC4YGR002C FYV6P53913 173 aa2.84□□□□□ -1.96
SWC4YGR002C KAP120Q02932 1032 aa2.84□□□□□ -1.96
SWC4YGR002C PRP42Q03776 544 aaKnown RBP2.84□□□□□ -1.96
SWC4YGR002C RTN1Q04947 295 aaKnown RBP2.84□□□□□ -1.96
SWC4YGR002C SEC10Q06245 871 aa2.84□□□□□ -1.96
SWC4YGR002C SYO1Q07395 620 aa2.84□□□□□ -1.96
SWC4YGR002C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.84□□□□□ -1.96not detected
SWC4YGR002C DNL4Q08387 944 aaPredicted RBP2.84□□□□□ -1.96
SWC4YGR002C RKM5Q12367 367 aa2.84□□□□□ -1.96
SWC4YGR002C SKS1Q12505 502 aa2.84□□□□□ -1.96
SWC4YGR002C TUS1Q06412 1307 aa2.83□□□□□ -1.96
SWC4YGR002C MDS3P53094 1487 aa2.83□□□□□ -1.96
SWC4YGR002C RPL31BP0C2H9 113 aaKnown RBP2.83□□□□□ -1.96
SWC4YGR002C CKA1P15790 372 aa2.83□□□□□ -1.96
SWC4YGR002C MEI4P29467 408 aa2.83□□□□□ -1.96
SWC4YGR002C DOA4P32571 926 aa2.83□□□□□ -1.96
SWC4YGR002C UTR4P32626 227 aa2.83□□□□□ -1.96
SWC4YGR002C YKL063CP35725 167 aa2.83□□□□□ -1.96
SWC4YGR002C CMC1P36064 111 aa2.83□□□□□ -1.96
SWC4YGR002C MDM31P38880 579 aa2.83□□□□□ -1.96
SWC4YGR002C DHH1P39517 506 aaKnown RBP2.83□□□□□ -1.96
SWC4YGR002C RIO2P40160 425 aaKnown RBP2.83□□□□□ -1.96
SWC4YGR002C POP1P41812 875 aa2.83□□□□□ -1.96
SWC4YGR002C HXT14P42833 540 aa2.83□□□□□ -1.96
SWC4YGR002C MDE1P47095 244 aa2.83□□□□□ -1.96
SWC4YGR002C RPM2Q02773 1202 aa2.83□□□□□ -1.96
SWC4YGR002C YDR131CQ03899 556 aa2.83□□□□□ -1.96
SWC4YGR002C VPS20Q04272 221 aa2.83□□□□□ -1.96
SWC4YGR002C MRPL51Q06090 140 aaPredicted RBP2.83□□□□□ -1.96
SWC4YGR002C VIK1Q12045 647 aa2.83□□□□□ -1.96
SWC4YGR002C MED4Q12343 284 aa2.83□□□□□ -1.96
SWC4YGR002C SET6Q12529 373 aa2.83□□□□□ -1.96
SWC4YGR002C LAG2Q92325 660 aa2.83□□□□□ -1.96
SWC4YGR002C FUS3P16892 353 aaKnown RBP2.82□□□□□ -1.96
SWC4YGR002C OSM1P21375 501 aaKnown RBP2.82□□□□□ -1.96
SWC4YGR002C VPS1P21576 704 aaKnown RBP2.82□□□□□ -1.96
SWC4YGR002C MNE1P24720 663 aa2.82□□□□□ -1.96
SWC4YGR002C ROX1P25042 368 aa2.82□□□□□ -1.96
SWC4YGR002C CDC10P25342 322 aaKnown RBP2.82□□□□□ -1.96
SWC4YGR002C YCR022CP25620 114 aa2.82□□□□□ -1.96
SWC4YGR002C BMH1P29311 267 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 76.5 ms