RNA–Protein interactions for RNA: YHR172W

SPC97, Transcript of Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC97, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC97YHR172W PUT2P07275 575 aa5.17□□□□□ -1.58
SPC97YHR172W SPS4P09937 338 aa5.17□□□□□ -1.58
SPC97YHR172W RPS5P26783 225 aaKnown RBP5.17□□□□□ -1.58
SPC97YHR172W ECM25P32525 599 aa5.17□□□□□ -1.58
SPC97YHR172W EMP70P32802 667 aa5.17□□□□□ -1.58
SPC97YHR172W RPF2P36160 344 aaKnown RBP5.17□□□□□ -1.58
SPC97YHR172W PIG2P40187 538 aa5.17□□□□□ -1.58
SPC97YHR172W FAR3P46671 204 aa5.17□□□□□ -1.58
SPC97YHR172W RFX1P48743 811 aa5.17□□□□□ -1.58
SPC97YHR172W ROG1P53118 685 aa5.17□□□□□ -1.58
SPC97YHR172W LSG1P53145 640 aaKnown RBP5.17□□□□□ -1.58
SPC97YHR172W VAC7P53950 1165 aa5.17□□□□□ -1.58
SPC97YHR172W YMR265CQ03508 461 aaKnown RBP5.17□□□□□ -1.58
SPC97YHR172W TAF12Q03761 539 aa5.17□□□□□ -1.58
SPC97YHR172W HOF1Q05080 669 aa5.17□□□□□ -1.58
SPC97YHR172W REX4Q08237 289 aa5.17□□□□□ -1.58
SPC97YHR172W GEP3Q08622 556 aa5.17□□□□□ -1.58
SPC97YHR172W YRA1Q12159 226 aaKnown RBP5.17□□□□□ -1.58
SPC97YHR172W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.17□□□□□ -1.58not detected
SPC97YHR172W COX2P00410 251 aa5.17□□□□□ -1.58
SPC97YHR172W RHO1P06780 209 aaKnown RBP5.17□□□□□ -1.58
SPC97YHR172W MAS1P10507 462 aa5.17□□□□□ -1.58
SPC97YHR172W SNF6P18888 332 aa5.17□□□□□ -1.58
SPC97YHR172W YHR210CP38893 341 aa5.17□□□□□ -1.58
SPC97YHR172W GIP2P40036 548 aa5.17□□□□□ -1.58
SPC97YHR172W HXT9P40885 567 aa5.17□□□□□ -1.58
SPC97YHR172W MSE1P48525 536 aa5.17□□□□□ -1.58
SPC97YHR172W HXT11P54862 567 aa5.17□□□□□ -1.58
SPC97YHR172W MRS2Q01926 470 aa5.17□□□□□ -1.58
SPC97YHR172W PRM15Q03262 622 aa5.17□□□□□ -1.58
SPC97YHR172W THI7Q05998 598 aa5.17□□□□□ -1.58
SPC97YHR172W PUS7Q08647 676 aaKnown RBP5.17□□□□□ -1.58
SPC97YHR172W YMR085WP0CF18 432 aa5.16□□□□□ -1.58
SPC97YHR172W ART10P18634 518 aaKnown RBP5.16□□□□□ -1.58
SPC97YHR172W YSR3P23501 404 aa5.16□□□□□ -1.58
SPC97YHR172W YEL020CP39994 560 aa5.16□□□□□ -1.58
SPC97YHR172W MRPL50P53724 139 aa5.16□□□□□ -1.58
SPC97YHR172W ADE16P54113 591 aaKnown RBP5.16□□□□□ -1.58
SPC97YHR172W SPP2Q02521 185 aa5.16□□□□□ -1.58
SPC97YHR172W YMR209CQ03648 457 aa5.16□□□□□ -1.58
SPC97YHR172W USA1Q03714 838 aa5.16□□□□□ -1.58
SPC97YHR172W YMR160WQ03823 816 aa5.16□□□□□ -1.58
SPC97YHR172W RPL31BP0C2H9 113 aaKnown RBP5.16□□□□□ -1.58
SPC97YHR172W SAC7P17121 654 aa5.16□□□□□ -1.58
SPC97YHR172W PRE10P21242 288 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
SPC97YHR172W AST1P35183 429 aa5.16□□□□□ -1.58
SPC97YHR172W MAE1P36013 669 aaKnown RBP5.16□□□□□ -1.58
SPC97YHR172W OLA1P38219 394 aaKnown RBP5.16□□□□□ -1.58
SPC97YHR172W DIA4P38705 446 aaPredicted RBP5.16□□□□□ -1.58
SPC97YHR172W LSM1P47017 172 aaKnown RBP5.16□□□□□ -1.58
SPC97YHR172W SHR3Q02774 210 aa5.16□□□□□ -1.58
SPC97YHR172W ARO10Q06408 635 aa5.16□□□□□ -1.58
SPC97YHR172W YLR108CQ12259 485 aa5.16□□□□□ -1.58
SPC97YHR172W BMT6Q12291 365 aa5.16□□□□□ -1.58
SPC97YHR172W YDR262WQ12331 272 aa5.16□□□□□ -1.58
SPC97YHR172W YBR255C-AQ3E776 120 aa5.16□□□□□ -1.58
SPC97YHR172W RAD1P06777 1100 aa5.15□□□□□ -1.58
SPC97YHR172W DSS4P32601 143 aa5.15□□□□□ -1.58
SPC97YHR172W PRP18P33411 251 aaPredicted RBP5.15□□□□□ -1.58
SPC97YHR172W LDB7P38210 180 aa5.15□□□□□ -1.58
SPC97YHR172W SBE22P38814 852 aa5.15□□□□□ -1.58
SPC97YHR172W PFS1P38872 237 aa5.15□□□□□ -1.58
SPC97YHR172W SDP1P40479 209 aa5.15□□□□□ -1.58
SPC97YHR172W YFL066CP43538 392 aa5.15□□□□□ -1.58
SPC97YHR172W SCD6P45978 349 aaKnown RBP RIP-Chip data5.15□□□□□ -1.58not detected
SPC97YHR172W STE24P47154 453 aa5.15□□□□□ -1.58
SPC97YHR172W IMO32P53219 342 aa5.15□□□□□ -1.58
SPC97YHR172W CDD1Q06549 142 aa5.15□□□□□ -1.58
SPC97YHR172W FRE5Q08908 694 aa5.15□□□□□ -1.58
SPC97YHR172W SPO24Q3E752 67 aa5.15□□□□□ -1.58
SPC97YHR172W ABF1P14164 731 aa5.15□□□□□ -1.59
SPC97YHR172W FBA1P14540 359 aaKnown RBP5.15□□□□□ -1.59
SPC97YHR172W CBF1P17106 351 aa5.15□□□□□ -1.59
SPC97YHR172W PDE1P22434 369 aa5.15□□□□□ -1.59
SPC97YHR172W RBK1P25332 333 aa5.15□□□□□ -1.59
SPC97YHR172W PUP3P25451 205 aaKnown RBP5.15□□□□□ -1.59
SPC97YHR172W PTC6P25646 442 aa5.15□□□□□ -1.59
SPC97YHR172W RFA2P26754 273 aaKnown RBP5.15□□□□□ -1.59
SPC97YHR172W FES1P38260 290 aa5.15□□□□□ -1.59
SPC97YHR172W PRP39P39682 629 aaKnown RBP5.15□□□□□ -1.59
SPC97YHR172W YER130CP39959 443 aa5.15□□□□□ -1.59
SPC97YHR172W SPG5P42933 373 aa5.15□□□□□ -1.59
SPC97YHR172W SWP82P43554 623 aa5.15□□□□□ -1.59
SPC97YHR172W RRN9P53437 365 aa5.15□□□□□ -1.59
SPC97YHR172W ORC3P54790 616 aa5.15□□□□□ -1.59
SPC97YHR172W NUP116Q02630 1113 aa5.15□□□□□ -1.59
SPC97YHR172W CDA1Q06702 301 aa5.15□□□□□ -1.59
SPC97YHR172W NSE1Q07913 336 aa5.15□□□□□ -1.59
SPC97YHR172W DNL4Q08387 944 aaPredicted RBP5.15□□□□□ -1.59
SPC97YHR172W ECM3Q99252 613 aa5.15□□□□□ -1.59
SPC97YHR172W UBA3Q99344 299 aa5.15□□□□□ -1.59
SPC97YHR172W WHI2P12611 486 aa5.14□□□□□ -1.59
SPC97YHR172W STE18P18852 110 aa5.14□□□□□ -1.59
SPC97YHR172W RIB1P38066 345 aa5.14□□□□□ -1.59
SPC97YHR172W SAF1P38352 637 aa5.14□□□□□ -1.59
SPC97YHR172W SAP30P38429 201 aa5.14□□□□□ -1.59
SPC97YHR172W MMS21P38632 267 aa5.14□□□□□ -1.59
SPC97YHR172W YHR112CP38716 378 aa5.14□□□□□ -1.59
SPC97YHR172W YHR122WP38829 231 aa5.14□□□□□ -1.59
SPC97YHR172W YGL159WP53110 370 aa5.14□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 213.4 ms