RNA–Protein interactions for RNA: YHR172W

SPC97, Transcript of Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC97, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC97YHR172W DRS1P32892 752 aaKnown RBP10.65□□□□□ -0.7
SPC97YHR172W TFA1P36100 482 aa10.1□□□□□ -0.79
SPC97YHR172W RQC2Q12532 1038 aaKnown RBP9.94□□□□□ -0.82
SPC97YHR172W BFR2Q06631 534 aaKnown RBP9.78□□□□□ -0.84
SPC97YHR172W TAF7Q05021 590 aa9.66□□□□□ -0.86
SPC97YHR172W MTC1P47018 478 aaKnown RBP9.32□□□□□ -0.92
SPC97YHR172W AVT3P36062 692 aa8.88□□□□□ -0.99
SPC97YHR172W DMA1P38823 416 aa8.8□□□□□ -1
SPC97YHR172W LEO1P38439 464 aa8.75□□□□□ -1.01
SPC97YHR172W DIP2Q12220 943 aaPredicted RBP8.63□□□□□ -1.03
SPC97YHR172W LEU3P08638 886 aa8.19□□□□□ -1.1
SPC97YHR172W AIM44Q99299 758 aa8.1□□□□□ -1.11
SPC97YHR172W NAP1P25293 417 aaKnown RBP8.06□□□□□ -1.12
SPC97YHR172W DMA2P53924 522 aa8□□□□□ -1.13
SPC97YHR172W IFH1P39520 1085 aa7.98□□□□□ -1.13
SPC97YHR172W PTP3P40048 928 aa7.97□□□□□ -1.13
SPC97YHR172W SAS10Q12136 610 aaPredicted RBP7.94□□□□□ -1.14
SPC97YHR172W IOC4Q04213 475 aa7.94□□□□□ -1.14
SPC97YHR172W URN1Q06525 465 aaKnown RBP7.92□□□□□ -1.14
SPC97YHR172W RLF2Q12495 606 aa7.91□□□□□ -1.14
SPC97YHR172W ABP1P15891 592 aaKnown RBP7.88□□□□□ -1.15
SPC97YHR172W RPN1P38764 993 aaKnown RBP7.84□□□□□ -1.16
SPC97YHR172W ORC1P54784 914 aaPredicted RBP7.79□□□□□ -1.16
SPC97YHR172W RSE1Q04693 1361 aaKnown RBP7.79□□□□□ -1.16
SPC97YHR172W SSP1P38871 571 aa7.67□□□□□ -1.18
SPC97YHR172W CKB1P43639 278 aa7.64□□□□□ -1.19
SPC97YHR172W YRB30P53107 440 aaPredicted RBP7.62□□□□□ -1.19
SPC97YHR172W FAP1P53971 965 aa7.6□□□□□ -1.19
SPC97YHR172W TOP1P04786 769 aa7.57□□□□□ -1.2
SPC97YHR172W YML020WQ03722 664 aa7.56□□□□□ -1.2
SPC97YHR172W NOP8Q08287 484 aaPredicted RBP7.51□□□□□ -1.21
SPC97YHR172W SNU71P53207 620 aaKnown RBP7.47□□□□□ -1.21
SPC97YHR172W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22not detected
SPC97YHR172W RIM101P33400 625 aa7.43□□□□□ -1.22
SPC97YHR172W NOP7P53261 605 aaKnown RBP7.43□□□□□ -1.22
SPC97YHR172W SPB4P25808 606 aaPredicted RBP7.42□□□□□ -1.22
SPC97YHR172W HGH1P48362 394 aaKnown RBP7.42□□□□□ -1.22
SPC97YHR172W RPL17AP05740 184 aaKnown RBP7.41□□□□□ -1.22
SPC97YHR172W RPL17BP46990 184 aaKnown RBP7.41□□□□□ -1.22
SPC97YHR172W SLX8P40072 274 aa7.4□□□□□ -1.22
SPC97YHR172W BRL1P38770 471 aa7.38□□□□□ -1.23
SPC97YHR172W GEF1P37020 779 aa7.33□□□□□ -1.24
SPC97YHR172W SSA1P10591 642 aaKnown RBP7.33□□□□□ -1.24
SPC97YHR172W KIN1P13185 1064 aa7.33□□□□□ -1.24
SPC97YHR172W ISW2Q08773 1120 aa7.29□□□□□ -1.24
SPC97YHR172W YAH1Q12184 172 aaKnown RBP7.29□□□□□ -1.24
SPC97YHR172W MGA2P40578 1113 aa7.28□□□□□ -1.24
SPC97YHR172W YLR271WQ06152 274 aa7.26□□□□□ -1.25
SPC97YHR172W SPT21P35209 758 aa7.26□□□□□ -1.25
SPC97YHR172W NUG1P40010 520 aaKnown RBP7.25□□□□□ -1.25
SPC97YHR172W MRX12P47084 519 aa7.25□□□□□ -1.25
SPC97YHR172W YNR021WP53723 404 aaKnown RBP7.24□□□□□ -1.25
SPC97YHR172W OXP1P28273 1286 aa7.23□□□□□ -1.25
SPC97YHR172W PRY3P47033 881 aa7.23□□□□□ -1.25
SPC97YHR172W YPR148CQ06523 435 aa7.23□□□□□ -1.25
SPC97YHR172W BRN1P38170 754 aa7.23□□□□□ -1.25
SPC97YHR172W MET10P39692 1035 aa7.23□□□□□ -1.25
SPC97YHR172W VPS70P47161 811 aa7.23□□□□□ -1.25
SPC97YHR172W SWE1P32944 819 aa7.22□□□□□ -1.25
SPC97YHR172W SUB1P54000 292 aaKnown RBP7.22□□□□□ -1.25
SPC97YHR172W SUB2Q07478 446 aaKnown RBP7.21□□□□□ -1.25
SPC97YHR172W MAM3Q12296 706 aa7.21□□□□□ -1.26
SPC97YHR172W REB1P21538 810 aa7.2□□□□□ -1.26
SPC97YHR172W ASF1P32447 279 aa7.2□□□□□ -1.26
SPC97YHR172W DSF2P38213 736 aa7.2□□□□□ -1.26
SPC97YHR172W YTA7P40340 1379 aa7.2□□□□□ -1.26
SPC97YHR172W SLD2P34252 453 aa7.19□□□□□ -1.26
SPC97YHR172W PAM1P37304 830 aaKnown RBP7.19□□□□□ -1.26
SPC97YHR172W ATG36P46983 293 aa7.18□□□□□ -1.26
SPC97YHR172W FAR11P53917 953 aa7.18□□□□□ -1.26
SPC97YHR172W DOS2P54858 310 aa7.18□□□□□ -1.26
SPC97YHR172W AIM7Q12156 149 aa7.18□□□□□ -1.26
SPC97YHR172W VPS72Q03388 795 aa7.18□□□□□ -1.26
SPC97YHR172W SET1P38827 1080 aaKnown RBP7.17□□□□□ -1.26
SPC97YHR172W SPC42P36094 363 aa7.16□□□□□ -1.26
SPC97YHR172W RTS3P53289 263 aa7.16□□□□□ -1.26
SPC97YHR172W RPG1P38249 964 aaKnown RBP7.15□□□□□ -1.27
SPC97YHR172W GUA1P38625 525 aaKnown RBP7.15□□□□□ -1.27
SPC97YHR172W LAM6Q08001 693 aa7.14□□□□□ -1.27
SPC97YHR172W GLC3P32775 704 aa7.13□□□□□ -1.27
SPC97YHR172W YIL055CP40523 627 aaKnown RBP7.12□□□□□ -1.27
SPC97YHR172W GIN4Q12263 1142 aa7.12□□□□□ -1.27
SPC97YHR172W MNN4P36044 1178 aa7.12□□□□□ -1.27
SPC97YHR172W MDG1P53885 366 aa7.11□□□□□ -1.27
SPC97YHR172W CST9Q06032 482 aa7.11□□□□□ -1.27
SPC97YHR172W PBS2P08018 668 aa7.1□□□□□ -1.27
SPC97YHR172W RRN6P32786 894 aa7.1□□□□□ -1.27
SPC97YHR172W HPC2Q01448 625 aa7.1□□□□□ -1.27
SPC97YHR172W OSW7P43611 510 aa7.08□□□□□ -1.28
SPC97YHR172W YJR008WP47085 338 aa7.08□□□□□ -1.28
SPC97YHR172W OCA5P38738 679 aa7.06□□□□□ -1.28
SPC97YHR172W HEM3P28789 327 aa7.06□□□□□ -1.28
SPC97YHR172W SSF1P38789 453 aaPredicted RBP7.06□□□□□ -1.28
SPC97YHR172W KRI1P42846 591 aaKnown RBP7.05□□□□□ -1.28
SPC97YHR172W SSA4P22202 642 aaKnown RBP7.05□□□□□ -1.28
SPC97YHR172W TFB3Q03290 321 aa7.04□□□□□ -1.28
SPC97YHR172W TPO2P53283 614 aa7.04□□□□□ -1.28
SPC97YHR172W FPR4Q06205 392 aaPredicted RBP7.03□□□□□ -1.28
SPC97YHR172W RAM2P29703 316 aa7.02□□□□□ -1.29
SPC97YHR172W YFR016CP43597 1233 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms