Protein–RNA interactions for Protein: P40479

SDP1, Dual-specificity protein phosphatase SDP1, yeastyeast

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDP1P40479 NSR1YGR159C 1245 nt18.22■□□□□ 0.51
SDP1P40479 YML009W-BYML009W-B 477 nt17.97■□□□□ 0.47
SDP1P40479 NOP1YDL014W 984 nt17.41■□□□□ 0.38
SDP1P40479 MDJ1YFL016C 1536 nt16.4■□□□□ 0.22
SDP1P40479 YKL036CYKL036C 393 nt15.74■□□□□ 0.11
SDP1P40479 SRX1YKL086W 384 nt15.2■□□□□ 0.02
SDP1P40479 YJL027CYJL027C 417 nt15.15■□□□□ 0.02
SDP1P40479 Q0297Q0297 156 nt15.14■□□□□ 0.01
SDP1P40479 DBP2YNL112W 1641 nt14.41□□□□□ -0.1
SDP1P40479 YCR051WYCR051W 669 nt14.34□□□□□ -0.11
SDP1P40479 YBR190WYBR190W 312 nt14.14□□□□□ -0.15
SDP1P40479 SCS3YGL126W 1143 nt14.13□□□□□ -0.15
SDP1P40479 TRN1tP(UGG)A 72 nt13.93□□□□□ -0.18
SDP1P40479 SUF9tP(UGG)F 72 nt13.93□□□□□ -0.18
SDP1P40479 SUF8tP(UGG)H 72 nt13.93□□□□□ -0.18
SDP1P40479 tP(UGG)LtP(UGG)L 72 nt13.93□□□□□ -0.18
SDP1P40479 SUF7tP(UGG)M 72 nt13.93□□□□□ -0.18
SDP1P40479 tP(UGG)N1tP(UGG)N1 72 nt13.93□□□□□ -0.18
SDP1P40479 tP(UGG)N2tP(UGG)N2 72 nt13.93□□□□□ -0.18
SDP1P40479 tP(UGG)O1tP(UGG)O1 72 nt13.93□□□□□ -0.18
SDP1P40479 SUF11tP(UGG)O2 72 nt13.93□□□□□ -0.18
SDP1P40479 RTC3YHR087W 336 nt13.74□□□□□ -0.21
SDP1P40479 CCC1YLR220W 969 nt13.71□□□□□ -0.21
SDP1P40479 YOL085CYOL085C 342 nt13.63□□□□□ -0.23
SDP1P40479 RPP1BYDL130W 321 nt13.57□□□□□ -0.24
SDP1P40479 RVS167YDR388W 1449 nt13.5□□□□□ -0.25
SDP1P40479 PKP1YIL042C 1185 nt13.4□□□□□ -0.26
SDP1P40479 SCJ1YMR214W 1134 nt13.31□□□□□ -0.28
SDP1P40479 PUT4YOR348C 1884 nt13.06□□□□□ -0.32
SDP1P40479 tP(UGG)O3tP(UGG)O3 72 nt13.06□□□□□ -0.32
SDP1P40479 PET122YER153C 765 nt12.97□□□□□ -0.33
SDP1P40479 SHR5YOL110W 714 nt12.96□□□□□ -0.33
SDP1P40479 SSA3YBL075C 1950 nt12.96□□□□□ -0.34
SDP1P40479 SCR1SCR1 522 nt12.77□□□□□ -0.37
SDP1P40479 URN1YPR152C 1398 nt12.77□□□□□ -0.37
SDP1P40479 ARE1YCR048W 1833 nt12.72□□□□□ -0.37
SDP1P40479 OPI9YLR338W 858 nt12.68□□□□□ -0.38
SDP1P40479 YDJ1YNL064C 1230 nt12.68□□□□□ -0.38
SDP1P40479 SAH1YER043C 1350 nt12.63□□□□□ -0.39
SDP1P40479 DEP1YAL013W 1218 nt12.61□□□□□ -0.39
SDP1P40479 POA1YBR022W 534 nt12.59□□□□□ -0.39
SDP1P40479 ATS1YAL020C 1002 nt12.56□□□□□ -0.4
SDP1P40479 RRN5YLR141W 1092 nt12.56□□□□□ -0.4
SDP1P40479 RPN10YHR200W 807 nt12.55□□□□□ -0.4
SDP1P40479 YHR049C-AYHR049C-A 297 nt12.53□□□□□ -0.4
SDP1P40479 YNL208WYNL208W 600 nt12.46□□□□□ -0.41
SDP1P40479 Q0182Q0182 405 nt12.45□□□□□ -0.42
SDP1P40479 BSC6YOL137W 1494 nt12.4□□□□□ -0.43
SDP1P40479 GAR1YHR089C 618 nt12.38□□□□□ -0.43
SDP1P40479 YER088W-BYER088W-B 147 nt12.32□□□□□ -0.44
SDP1P40479 PUN1YLR414C 792 nt12.32□□□□□ -0.44
SDP1P40479 BUD23YCR047C 828 nt12.2□□□□□ -0.46
SDP1P40479 RSB1YOR049C 1065 nt12.19□□□□□ -0.46
SDP1P40479 PTC2YER089C 1395 nt12.18□□□□□ -0.46
SDP1P40479 YJR018WYJR018W 363 nt12.17□□□□□ -0.46
SDP1P40479 MOT3YMR070W 1473 nt12.15□□□□□ -0.46
SDP1P40479 SPT5YML010W 3192 nt12.1□□□□□ -0.47
SDP1P40479 NAB2YGL122C 1578 nt12.1□□□□□ -0.47
SDP1P40479 TIR1YER011W 765 nt12□□□□□ -0.49
SDP1P40479 SSA1YAL005C 1929 nt11.91□□□□□ -0.5
SDP1P40479 YJR120WYJR120W 351 nt11.9□□□□□ -0.5
SDP1P40479 FIS1YIL065C 468 nt11.87□□□□□ -0.51
SDP1P40479 DAL1YIR027C 1383 nt11.87□□□□□ -0.51
SDP1P40479 RPP2BYDR382W 333 nt11.85□□□□□ -0.51
SDP1P40479 INM2YDR287W 879 nt11.82□□□□□ -0.52
SDP1P40479 SSA4YER103W 1929 nt11.78□□□□□ -0.52
SDP1P40479 FPR4YLR449W 1179 nt11.77□□□□□ -0.53
SDP1P40479 PHO4YFR034C 939 nt11.75□□□□□ -0.53
SDP1P40479 PST2YDR032C 597 nt11.7□□□□□ -0.54
SDP1P40479 MEP2YNL142W 1500 nt11.7□□□□□ -0.54
SDP1P40479 YPS1YLR120C 1710 nt11.65□□□□□ -0.54
SDP1P40479 SRB2YHR041C 633 nt11.61□□□□□ -0.55
SDP1P40479 YBL100CYBL100C 315 nt11.61□□□□□ -0.55
SDP1P40479 BDH2YAL061W 1254 nt11.57□□□□□ -0.56
SDP1P40479 YDR095CYDR095C 411 nt11.53□□□□□ -0.56
SDP1P40479 YHR165W-AYHR165W-A 312 nt11.51□□□□□ -0.57
SDP1P40479 FUN26YAL022C 1554 nt11.46□□□□□ -0.57
SDP1P40479 DCW1YKL046C 1350 nt11.45□□□□□ -0.58
SDP1P40479 WWM1YFL010C 636 nt11.39□□□□□ -0.59
SDP1P40479 TRM9YML014W 840 nt11.39□□□□□ -0.59
SDP1P40479 LSM3YLR438C-A 270 nt11.38□□□□□ -0.59
SDP1P40479 BDF1YLR399C 2061 nt11.37□□□□□ -0.59
SDP1P40479 ALF1YNL148C 765 nt11.37□□□□□ -0.59
SDP1P40479 EMI2YDR516C 1503 nt11.34□□□□□ -0.59
SDP1P40479 CCT6YDR188W 1641 nt11.32□□□□□ -0.6
SDP1P40479 YMR090WYMR090W 684 nt11.32□□□□□ -0.6
SDP1P40479 RPP2AYOL039W 321 nt11.31□□□□□ -0.6
SDP1P40479 PTP1YDL230W 1008 nt11.29□□□□□ -0.6
SDP1P40479 YGR021WYGR021W 873 nt11.29□□□□□ -0.6
SDP1P40479 YFL021C-AYFL021C-A 855 nt11.27□□□□□ -0.61
SDP1P40479 SHU1YHL006C 453 nt11.27□□□□□ -0.61
SDP1P40479 SUF2tP(AGG)C 72 nt11.25□□□□□ -0.61
SDP1P40479 SUF10tP(AGG)N 72 nt11.25□□□□□ -0.61
SDP1P40479 YDL221WYDL221W 552 nt11.24□□□□□ -0.61
SDP1P40479 YBR220CYBR220C 1683 nt11.24□□□□□ -0.61
SDP1P40479 TAT1YBR069C 1860 nt11.23□□□□□ -0.61
SDP1P40479 SIS1YNL007C 1059 nt11.23□□□□□ -0.61
SDP1P40479 CAC2YML102W 1407 nt11.23□□□□□ -0.61
SDP1P40479 HOM6YJR139C 1080 nt11.21□□□□□ -0.61
SDP1P40479 SDH1YKL148C 1923 nt11.16□□□□□ -0.62
Retrieved 100 of 7,029 protein–RNA pairs in 7.3 ms