Protein–RNA interactions for Protein: P18888

SNF6, Transcription regulatory protein SNF6, yeastyeast

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNF6P18888 NSR1YGR159C 1245 nt18.6■□□□□ 0.57
SNF6P18888 YML009W-BYML009W-B 477 nt18.42■□□□□ 0.54
SNF6P18888 NOP1YDL014W 984 nt17.82■□□□□ 0.44
SNF6P18888 MDJ1YFL016C 1536 nt16.75■□□□□ 0.27
SNF6P18888 YKL036CYKL036C 393 nt16.16■□□□□ 0.18
SNF6P18888 SRX1YKL086W 384 nt15.57■□□□□ 0.08
SNF6P18888 Q0297Q0297 156 nt15.51■□□□□ 0.07
SNF6P18888 YJL027CYJL027C 417 nt15.46■□□□□ 0.07
SNF6P18888 YCR051WYCR051W 669 nt14.72□□□□□ -0.05
SNF6P18888 DBP2YNL112W 1641 nt14.71□□□□□ -0.05
SNF6P18888 SCS3YGL126W 1143 nt14.53□□□□□ -0.08
SNF6P18888 YBR190WYBR190W 312 nt14.4□□□□□ -0.1
SNF6P18888 TRN1tP(UGG)A 72 nt14.25□□□□□ -0.13
SNF6P18888 SUF9tP(UGG)F 72 nt14.25□□□□□ -0.13
SNF6P18888 SUF8tP(UGG)H 72 nt14.25□□□□□ -0.13
SNF6P18888 tP(UGG)LtP(UGG)L 72 nt14.25□□□□□ -0.13
SNF6P18888 SUF7tP(UGG)M 72 nt14.25□□□□□ -0.13
SNF6P18888 tP(UGG)N1tP(UGG)N1 72 nt14.25□□□□□ -0.13
SNF6P18888 tP(UGG)N2tP(UGG)N2 72 nt14.25□□□□□ -0.13
SNF6P18888 tP(UGG)O1tP(UGG)O1 72 nt14.25□□□□□ -0.13
SNF6P18888 SUF11tP(UGG)O2 72 nt14.25□□□□□ -0.13
SNF6P18888 CCC1YLR220W 969 nt14.06□□□□□ -0.16
SNF6P18888 RTC3YHR087W 336 nt14.03□□□□□ -0.16
SNF6P18888 YOL085CYOL085C 342 nt14□□□□□ -0.17
SNF6P18888 RPP1BYDL130W 321 nt13.91□□□□□ -0.18
SNF6P18888 PKP1YIL042C 1185 nt13.79□□□□□ -0.2
SNF6P18888 RVS167YDR388W 1449 nt13.78□□□□□ -0.2
SNF6P18888 SCJ1YMR214W 1134 nt13.63□□□□□ -0.23
SNF6P18888 SSA3YBL075C 1950 nt13.55□□□□□ -0.24
SNF6P18888 tP(UGG)O3tP(UGG)O3 72 nt13.38□□□□□ -0.27
SNF6P18888 PET122YER153C 765 nt13.3□□□□□ -0.28
SNF6P18888 PUT4YOR348C 1884 nt13.28□□□□□ -0.28
SNF6P18888 SHR5YOL110W 714 nt13.24□□□□□ -0.29
SNF6P18888 SCR1SCR1 522 nt13.09□□□□□ -0.31
SNF6P18888 URN1YPR152C 1398 nt13.04□□□□□ -0.32
SNF6P18888 YDJ1YNL064C 1230 nt12.97□□□□□ -0.33
SNF6P18888 ARE1YCR048W 1833 nt12.94□□□□□ -0.34
SNF6P18888 OPI9YLR338W 858 nt12.93□□□□□ -0.34
SNF6P18888 DEP1YAL013W 1218 nt12.92□□□□□ -0.34
SNF6P18888 ATS1YAL020C 1002 nt12.92□□□□□ -0.34
SNF6P18888 RRN5YLR141W 1092 nt12.9□□□□□ -0.34
SNF6P18888 SAH1YER043C 1350 nt12.89□□□□□ -0.35
SNF6P18888 POA1YBR022W 534 nt12.83□□□□□ -0.36
SNF6P18888 RPN10YHR200W 807 nt12.8□□□□□ -0.36
SNF6P18888 YHR049C-AYHR049C-A 297 nt12.78□□□□□ -0.36
SNF6P18888 YNL208WYNL208W 600 nt12.73□□□□□ -0.37
SNF6P18888 GAR1YHR089C 618 nt12.68□□□□□ -0.38
SNF6P18888 YER088W-BYER088W-B 147 nt12.64□□□□□ -0.39
SNF6P18888 BSC6YOL137W 1494 nt12.62□□□□□ -0.39
SNF6P18888 PUN1YLR414C 792 nt12.56□□□□□ -0.4
SNF6P18888 RSB1YOR049C 1065 nt12.53□□□□□ -0.4
SNF6P18888 BUD23YCR047C 828 nt12.46□□□□□ -0.41
SNF6P18888 YJR018WYJR018W 363 nt12.43□□□□□ -0.42
SNF6P18888 PTC2YER089C 1395 nt12.42□□□□□ -0.42
SNF6P18888 NAB2YGL122C 1578 nt12.32□□□□□ -0.44
SNF6P18888 TIR1YER011W 765 nt12.29□□□□□ -0.44
SNF6P18888 SPT5YML010W 3192 nt12.23□□□□□ -0.45
SNF6P18888 SSA1YAL005C 1929 nt12.18□□□□□ -0.46
SNF6P18888 YJR120WYJR120W 351 nt12.17□□□□□ -0.46
SNF6P18888 FIS1YIL065C 468 nt12.11□□□□□ -0.47
SNF6P18888 DAL1YIR027C 1383 nt12.1□□□□□ -0.47
SNF6P18888 RPP2BYDR382W 333 nt12.1□□□□□ -0.47
SNF6P18888 INM2YDR287W 879 nt12.04□□□□□ -0.48
SNF6P18888 FPR4YLR449W 1179 nt12.03□□□□□ -0.48
SNF6P18888 PST2YDR032C 597 nt12.02□□□□□ -0.49
SNF6P18888 PHO4YFR034C 939 nt11.98□□□□□ -0.49
SNF6P18888 SSA4YER103W 1929 nt11.94□□□□□ -0.5
SNF6P18888 SRB2YHR041C 633 nt11.91□□□□□ -0.5
SNF6P18888 MEP2YNL142W 1500 nt11.89□□□□□ -0.51
SNF6P18888 YBL100CYBL100C 315 nt11.86□□□□□ -0.51
SNF6P18888 YPS1YLR120C 1710 nt11.86□□□□□ -0.51
SNF6P18888 BDH2YAL061W 1254 nt11.81□□□□□ -0.52
SNF6P18888 YDR095CYDR095C 411 nt11.75□□□□□ -0.53
SNF6P18888 YHR165W-AYHR165W-A 312 nt11.73□□□□□ -0.53
SNF6P18888 FUN26YAL022C 1554 nt11.71□□□□□ -0.54
SNF6P18888 WWM1YFL010C 636 nt11.68□□□□□ -0.54
SNF6P18888 DCW1YKL046C 1350 nt11.67□□□□□ -0.54
SNF6P18888 TRM9YML014W 840 nt11.63□□□□□ -0.55
SNF6P18888 LSM3YLR438C-A 270 nt11.62□□□□□ -0.55
SNF6P18888 ALF1YNL148C 765 nt11.6□□□□□ -0.55
SNF6P18888 SHU1YHL006C 453 nt11.59□□□□□ -0.55
SNF6P18888 YGR021WYGR021W 873 nt11.56□□□□□ -0.56
SNF6P18888 CCT6YDR188W 1641 nt11.54□□□□□ -0.56
SNF6P18888 YFL021C-AYFL021C-A 855 nt11.54□□□□□ -0.56
SNF6P18888 EMI2YDR516C 1503 nt11.54□□□□□ -0.56
SNF6P18888 BDF1YLR399C 2061 nt11.52□□□□□ -0.57
SNF6P18888 RPP2AYOL039W 321 nt11.52□□□□□ -0.57
SNF6P18888 PTP1YDL230W 1008 nt11.5□□□□□ -0.57
SNF6P18888 YMR090WYMR090W 684 nt11.5□□□□□ -0.57
SNF6P18888 HOM6YJR139C 1080 nt11.49□□□□□ -0.57
SNF6P18888 YAL037C-BYAL037C-B 975 nt11.49□□□□□ -0.57
SNF6P18888 SUF2tP(AGG)C 72 nt11.47□□□□□ -0.57
SNF6P18888 SUF10tP(AGG)N 72 nt11.47□□□□□ -0.57
SNF6P18888 CAC2YML102W 1407 nt11.44□□□□□ -0.58
SNF6P18888 SIS1YNL007C 1059 nt11.44□□□□□ -0.58
SNF6P18888 YDL221WYDL221W 552 nt11.43□□□□□ -0.58
SNF6P18888 YBR220CYBR220C 1683 nt11.41□□□□□ -0.58
SNF6P18888 YKL097CYKL097C 411 nt11.39□□□□□ -0.59
SNF6P18888 MNP1YGL068W 585 nt11.36□□□□□ -0.59
SNF6P18888 TAT1YBR069C 1860 nt11.35□□□□□ -0.59
Retrieved 100 of 7,029 protein–RNA pairs in 23.1 ms