RNA–Protein interactions for RNA: YLR171W

YLR171W, Transcript of Dubious open reading frame, yeastyeast

Gene YLR171W, Length 390 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR171WYLR171W PRD1P25375 712 aa2.42□□□□□ -2.02
YLR171WYLR171W WBP1P33767 430 aaKnown RBP2.42□□□□□ -2.02
YLR171WYLR171W MIX23P38162 196 aa2.42□□□□□ -2.02
YLR171WYLR171W MUM2P38236 366 aa2.42□□□□□ -2.02
YLR171WYLR171W URB2P47108 1174 aa2.42□□□□□ -2.02
YLR171WYLR171W CAF130P53280 1122 aaPredicted RBP2.42□□□□□ -2.02
YLR171WYLR171W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
YLR171WYLR171W AVL9Q12500 764 aa2.42□□□□□ -2.02
YLR171WYLR171W SSH4P32343 579 aa2.41□□□□□ -2.02
YLR171WYLR171W STB6P36085 766 aa2.41□□□□□ -2.02
YLR171WYLR171W REG2P38232 338 aa2.41□□□□□ -2.02
YLR171WYLR171W YMR147WP40218 223 aaKnown RBP2.41□□□□□ -2.02
YLR171WYLR171W PAN6P40459 309 aa2.41□□□□□ -2.02
YLR171WYLR171W TMA108P40462 946 aa2.41□□□□□ -2.02
YLR171WYLR171W TRS85P46944 698 aa2.41□□□□□ -2.02
YLR171WYLR171W NCA3P46955 337 aa2.41□□□□□ -2.02
YLR171WYLR171W SHY1P53266 389 aa2.41□□□□□ -2.02
YLR171WYLR171W SLG1P54867 378 aa2.41□□□□□ -2.02
YLR171WYLR171W PNG1Q02890 363 aa2.41□□□□□ -2.02
YLR171WYLR171W DAL2P25335 343 aa2.4□□□□□ -2.03
YLR171WYLR171W UTH1P36135 365 aa2.4□□□□□ -2.03
YLR171WYLR171W PRM5P40476 318 aa2.4□□□□□ -2.03
YLR171WYLR171W MRX6P48564 524 aa2.4□□□□□ -2.03
YLR171WYLR171W OCA1P50946 238 aaPredicted RBP2.4□□□□□ -2.03
YLR171WYLR171W YGR066CP53242 292 aa2.4□□□□□ -2.03
YLR171WYLR171W YMR027WQ04371 470 aa2.4□□□□□ -2.03
YLR171WYLR171W CTI6Q08923 506 aa2.4□□□□□ -2.03
YLR171WYLR171W RCN2Q12044 265 aa2.4□□□□□ -2.03
YLR171WYLR171W WTM1Q12363 437 aaKnown RBP2.4□□□□□ -2.03
YLR171WYLR171W RPL31BP0C2H9 113 aaKnown RBP2.39□□□□□ -2.03
YLR171WYLR171W CBS1P14066 229 aa2.39□□□□□ -2.03
YLR171WYLR171W PEP3P27801 918 aa2.39□□□□□ -2.03
YLR171WYLR171W PAH1P32567 862 aa2.39□□□□□ -2.03
YLR171WYLR171W CBP4P37267 147 aa2.39□□□□□ -2.03
YLR171WYLR171W RIB5P38145 238 aa2.39□□□□□ -2.03
YLR171WYLR171W YDL012CQ12489 107 aa2.39□□□□□ -2.03
YLR171WYLR171W ENT1Q12518 454 aa2.39□□□□□ -2.03
YLR171WYLR171W YDL007C-AQ2V2Q0 85 aa2.39□□□□□ -2.03
YLR171WYLR171W RPS8AP0CX39 200 aaKnown RBP2.38□□□□□ -2.03
YLR171WYLR171W RPS8BP0CX40 200 aaKnown RBP2.38□□□□□ -2.03
YLR171WYLR171W PCL1P24867 279 aa2.38□□□□□ -2.03
YLR171WYLR171W SPS22P25380 463 aa2.38□□□□□ -2.03
YLR171WYLR171W YCR041WP37265 110 aa2.38□□□□□ -2.03
YLR171WYLR171W DOT5P40553 215 aa2.38□□□□□ -2.03
YLR171WYLR171W HAL1Q01766 294 aa2.38□□□□□ -2.03
YLR171WYLR171W MRP51Q02950 344 aa2.38□□□□□ -2.03
YLR171WYLR171W SOV1Q04748 898 aa2.38□□□□□ -2.03
YLR171WYLR171W MUM3Q08750 479 aa2.38□□□□□ -2.03
YLR171WYLR171W SEM1O94742 89 aa2.37□□□□□ -2.03
YLR171WYLR171W AAC3P18238 307 aa2.37□□□□□ -2.03
YLR171WYLR171W MNS1P32906 549 aa2.37□□□□□ -2.03
YLR171WYLR171W YBR225WP38321 900 aa2.37□□□□□ -2.03
YLR171WYLR171W SLX1P38324 304 aa2.37□□□□□ -2.03
YLR171WYLR171W MSG5P38590 489 aa2.37□□□□□ -2.03
YLR171WYLR171W MST28P39552 234 aa2.37□□□□□ -2.03
YLR171WYLR171W PET130P47065 347 aa2.37□□□□□ -2.03
YLR171WYLR171W YGL108CP53139 140 aa2.37□□□□□ -2.03
YLR171WYLR171W RTS3P53289 263 aa2.37□□□□□ -2.03
YLR171WYLR171W HXT11P54862 567 aa2.37□□□□□ -2.03
YLR171WYLR171W PEX25Q02969 394 aa2.37□□□□□ -2.03
YLR171WYLR171W HER2Q03557 464 aa2.37□□□□□ -2.03
YLR171WYLR171W PDS5Q04264 1277 aa2.37□□□□□ -2.03
YLR171WYLR171W RRD2Q12461 358 aa2.37□□□□□ -2.03
YLR171WYLR171W RAD61Q99359 647 aa2.37□□□□□ -2.03
YLR171WYLR171W FOB1O13329 566 aa2.36□□□□□ -2.03
YLR171WYLR171W DFR1P07807 211 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
YLR171WYLR171W DPB3P27344 201 aa2.36□□□□□ -2.03
YLR171WYLR171W MRE11P32829 692 aa2.36□□□□□ -2.03
YLR171WYLR171W NOP4P37838 685 aaKnown RBP2.36□□□□□ -2.03
YLR171WYLR171W THI2P38141 450 aa2.36□□□□□ -2.03
YLR171WYLR171W NOP16P40007 231 aaKnown RBP2.36□□□□□ -2.03
YLR171WYLR171W LAM5P43560 674 aa2.36□□□□□ -2.03
YLR171WYLR171W PCP1P53259 346 aa2.36□□□□□ -2.03
YLR171WYLR171W TSA2Q04120 196 aa2.36□□□□□ -2.03
YLR171WYLR171W ATP10P18496 279 aa2.35□□□□□ -2.03
YLR171WYLR171W UPF3P48412 387 aaKnown RBP2.35□□□□□ -2.03
YLR171WYLR171W YIP1P53039 248 aa2.35□□□□□ -2.03
YLR171WYLR171W MTM1P53320 366 aa2.35□□□□□ -2.03
YLR171WYLR171W RSN1Q03516 953 aa2.35□□□□□ -2.03
YLR171WYLR171W YDR239CQ03780 787 aa2.35□□□□□ -2.03
YLR171WYLR171W PPM1Q04081 328 aa2.35□□□□□ -2.03
YLR171WYLR171W YDR056CQ12025 205 aa2.35□□□□□ -2.03
YLR171WYLR171W SEC39Q12745 709 aa2.35□□□□□ -2.03
YLR171WYLR171W NFT1P0CE68 1218 aa2.34□□□□□ -2.03
YLR171WYLR171W OLE1P21147 510 aaKnown RBP2.34□□□□□ -2.03
YLR171WYLR171W TIP1P27654 210 aaPredicted RBP2.34□□□□□ -2.03
YLR171WYLR171W MRPL10P36520 322 aa2.34□□□□□ -2.03
YLR171WYLR171W SSN8P47821 323 aa2.34□□□□□ -2.03
YLR171WYLR171W CWC25P53854 179 aaKnown RBP2.34□□□□□ -2.03
YLR171WYLR171W NCS2P53923 493 aaPredicted RBP2.34□□□□□ -2.03
YLR171WYLR171W YPR022CQ12139 1133 aa2.34□□□□□ -2.03
YLR171WYLR171W PKH2Q12236 1081 aaKnown RBP2.34□□□□□ -2.03
YLR171WYLR171W TRP1P00912 224 aa2.33□□□□□ -2.04
YLR171WYLR171W ITR1P30605 584 aa2.33□□□□□ -2.04
YLR171WYLR171W AFG1P32317 509 aa2.33□□□□□ -2.04
YLR171WYLR171W MRP21P38175 177 aa2.33□□□□□ -2.04
YLR171WYLR171W CST26P38226 397 aa2.33□□□□□ -2.04
YLR171WYLR171W YBR137WP38276 179 aa2.33□□□□□ -2.04
YLR171WYLR171W MET28P40573 187 aa2.33□□□□□ -2.04
YLR171WYLR171W VPS75P53853 264 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms