RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C AEP3Q12089 606 aa3.38□□□□□ -1.87
RRP42YDL111C FRE7Q12333 620 aa3.38□□□□□ -1.87
RRP42YDL111C FRE6Q12473 712 aa3.38□□□□□ -1.87
RRP42YDL111C RIP1P08067 215 aa3.37□□□□□ -1.87
RRP42YDL111C YML002WP0CF17 737 aa3.37□□□□□ -1.87
RRP42YDL111C URA4P20051 364 aa3.37□□□□□ -1.87
RRP42YDL111C URE2P23202 354 aaKnown RBP3.37□□□□□ -1.87
RRP42YDL111C SGV1P23293 657 aaKnown RBP3.37□□□□□ -1.87
RRP42YDL111C MCM4P30665 933 aaKnown RBP3.37□□□□□ -1.87
RRP42YDL111C SNC1P31109 117 aa3.37□□□□□ -1.87
RRP42YDL111C UIP5P36137 443 aa3.37□□□□□ -1.87
RRP42YDL111C DUG2P38149 878 aa3.37□□□□□ -1.87
RRP42YDL111C MMS4P38257 691 aa3.37□□□□□ -1.87
RRP42YDL111C TOM71P38825 639 aaKnown RBP3.37□□□□□ -1.87
RRP42YDL111C TIF4631P39935 952 aaKnown RBP3.37□□□□□ -1.87
RRP42YDL111C YIL060WP40519 144 aa3.37□□□□□ -1.87
RRP42YDL111C HXT9P40885 567 aa3.37□□□□□ -1.87
RRP42YDL111C SNO3P43544 222 aa3.37□□□□□ -1.87
RRP42YDL111C NMD5P46970 1048 aa3.37□□□□□ -1.87
RRP42YDL111C YJL132WP47014 750 aa3.37□□□□□ -1.87
RRP42YDL111C OCA1P50946 238 aaPredicted RBP3.37□□□□□ -1.87
RRP42YDL111C ALT2P52892 507 aa3.37□□□□□ -1.87
RRP42YDL111C MLC1P53141 149 aa3.37□□□□□ -1.87
RRP42YDL111C SMM1P53720 384 aaKnown RBP3.37□□□□□ -1.87
RRP42YDL111C IDP3P53982 420 aaKnown RBP3.37□□□□□ -1.87
RRP42YDL111C YVH1Q02256 364 aaKnown RBP3.37□□□□□ -1.87
RRP42YDL111C CTL1Q03220 320 aaKnown RBP3.37□□□□□ -1.87
RRP42YDL111C PRP42Q03776 544 aaKnown RBP3.37□□□□□ -1.87
RRP42YDL111C PFA4Q12006 378 aa3.37□□□□□ -1.87
RRP42YDL111C VAM3Q12241 283 aa3.37□□□□□ -1.87
RRP42YDL111C HIF1Q12373 385 aa3.37□□□□□ -1.87
RRP42YDL111C RRI1Q12468 440 aa3.37□□□□□ -1.87
RRP42YDL111C RPL6BP05739 176 aaKnown RBP3.36□□□□□ -1.87
RRP42YDL111C LPD1P09624 499 aaKnown RBP3.36□□□□□ -1.87
RRP42YDL111C TYR1P20049 452 aa3.36□□□□□ -1.87
RRP42YDL111C KRE2P27809 442 aa3.36□□□□□ -1.87
RRP42YDL111C MSP1P28737 362 aa3.36□□□□□ -1.87
RRP42YDL111C HIR2P32480 875 aa3.36□□□□□ -1.87
RRP42YDL111C REC114P32841 428 aa3.36□□□□□ -1.87
RRP42YDL111C LAS1P36146 502 aaPredicted RBP3.36□□□□□ -1.87
RRP42YDL111C VHC1P38329 1120 aa3.36□□□□□ -1.87
RRP42YDL111C ECM27P47144 725 aa3.36□□□□□ -1.87
RRP42YDL111C DRN1P53255 507 aaKnown RBP3.36□□□□□ -1.87
RRP42YDL111C ZPR1P53303 486 aaKnown RBP3.36□□□□□ -1.87
RRP42YDL111C SOL4P53315 255 aa3.36□□□□□ -1.87
RRP42YDL111C RHO4Q00246 291 aa3.36□□□□□ -1.87
RRP42YDL111C RPL6AQ02326 176 aaKnown RBP3.36□□□□□ -1.87
RRP42YDL111C SMA1Q02651 245 aa3.36□□□□□ -1.87
RRP42YDL111C DCS1Q06151 350 aa3.36□□□□□ -1.87
RRP42YDL111C POS5Q06892 414 aa3.36□□□□□ -1.87
RRP42YDL111C RDR1Q08904 546 aa3.36□□□□□ -1.87
RRP42YDL111C RKM1Q08961 583 aaPredicted RBP3.36□□□□□ -1.87
RRP42YDL111C NFI1Q12216 726 aa3.36□□□□□ -1.87
RRP42YDL111C MTR10Q99189 972 aa3.36□□□□□ -1.87
RRP42YDL111C SUC2P00724 532 aa3.35□□□□□ -1.87
RRP42YDL111C RAD52P06778 471 aaKnown RBP3.35□□□□□ -1.87
RRP42YDL111C PHO84P25297 587 aaKnown RBP3.35□□□□□ -1.87
RRP42YDL111C POT1P27796 417 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
RRP42YDL111C MSN2P33748 704 aa3.35□□□□□ -1.87
RRP42YDL111C SER3P40054 469 aa3.35□□□□□ -1.87
RRP42YDL111C YMR147WP40218 223 aaKnown RBP3.35□□□□□ -1.87
RRP42YDL111C TFG2P41896 400 aaPredicted RBP3.35□□□□□ -1.87
RRP42YDL111C FYV8P46949 817 aaKnown RBP3.35□□□□□ -1.87
RRP42YDL111C VPS25P47142 202 aa3.35□□□□□ -1.87
RRP42YDL111C PKP2P53170 491 aa3.35□□□□□ -1.87
RRP42YDL111C TOF1P53840 1238 aa3.35□□□□□ -1.87
RRP42YDL111C SSK1Q07084 712 aa3.35□□□□□ -1.87
RRP42YDL111C YDL218WQ07629 317 aa3.35□□□□□ -1.87
RRP42YDL111C KEL3Q08979 651 aaPredicted RBP3.35□□□□□ -1.87
RRP42YDL111C EDE1P34216 1381 aa3.35□□□□□ -1.87
RRP42YDL111C ATP10P18496 279 aa3.34□□□□□ -1.87
RRP42YDL111C GEX1P25596 615 aa3.34□□□□□ -1.87
RRP42YDL111C SIN4P32259 974 aa3.34□□□□□ -1.87
RRP42YDL111C RGT1P32862 1170 aa3.34□□□□□ -1.87
RRP42YDL111C CBP4P37267 147 aa3.34□□□□□ -1.87
RRP42YDL111C LEU5P38702 357 aa3.34□□□□□ -1.87
RRP42YDL111C POP2P39008 433 aa3.34□□□□□ -1.87
RRP42YDL111C VHS2P40463 436 aa3.34□□□□□ -1.87
RRP42YDL111C CFD1P40558 293 aa3.34□□□□□ -1.87
RRP42YDL111C IAH1P41734 238 aa3.34□□□□□ -1.87
RRP42YDL111C RSC9Q03124 581 aa3.34□□□□□ -1.87
RRP42YDL111C PPM1Q04081 328 aa3.34□□□□□ -1.87
RRP42YDL111C ECI1Q05871 280 aa3.34□□□□□ -1.87
RRP42YDL111C ARP6Q12509 438 aa3.34□□□□□ -1.87
RRP42YDL111C YLR278CQ05854 1341 aa3.34□□□□□ -1.87
RRP42YDL111C CYB2P00175 591 aa3.33□□□□□ -1.88
RRP42YDL111C GAL4P04386 881 aa3.33□□□□□ -1.88
RRP42YDL111C TRX1P22217 103 aaKnown RBP3.33□□□□□ -1.88
RRP42YDL111C GID7P25569 745 aa3.33□□□□□ -1.88
RRP42YDL111C PRP21P32524 280 aaPredicted RBP3.33□□□□□ -1.88
RRP42YDL111C YEL043WP32618 956 aa3.33□□□□□ -1.88
RRP42YDL111C UTR4P32626 227 aa3.33□□□□□ -1.88
RRP42YDL111C RRP1P35178 278 aaPredicted RBP3.33□□□□□ -1.88
RRP42YDL111C ZTA1P38230 334 aaKnown RBP3.33□□□□□ -1.88
RRP42YDL111C SIF2P38262 535 aa3.33□□□□□ -1.88
RRP42YDL111C WSS1P38838 269 aa3.33□□□□□ -1.88
RRP42YDL111C YER130CP39959 443 aa3.33□□□□□ -1.88
RRP42YDL111C VRG4P40107 337 aa3.33□□□□□ -1.88
RRP42YDL111C MEP2P41948 499 aa3.33□□□□□ -1.88
RRP42YDL111C RPS0BP46654 252 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms