RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeastyeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB4YPR056W TY1A-ORP0CX59 440 aa9.53□□□□□ -0.88
TFB4YPR056W TY1A-PR2P0CX60 440 aa9.53□□□□□ -0.88
TFB4YPR056W TY1A-DR5P0CX65 440 aa9.53□□□□□ -0.88
TFB4YPR056W TY1A-ER2P0CX66 440 aa9.53□□□□□ -0.88
TFB4YPR056W TY1A-GR3P0CX67 440 aa9.53□□□□□ -0.88
TFB4YPR056W TY1A-LR1P0CX68 440 aa9.53□□□□□ -0.88
TFB4YPR056W TY1A-MR2P0CX69 440 aa9.53□□□□□ -0.88
TFB4YPR056W SEC2P17065 759 aa9.53□□□□□ -0.88
TFB4YPR056W SDH2P21801 266 aa9.53□□□□□ -0.88
TFB4YPR056W TY1A-JR2P47099 440 aa9.53□□□□□ -0.88
TFB4YPR056W TY1A-DR1Q03856 440 aa9.53□□□□□ -0.88
TFB4YPR056W TY1A-ML1Q04706 440 aaKnown RBP9.53□□□□□ -0.88
TFB4YPR056W TY1A-BRQ12217 440 aa9.53□□□□□ -0.88
TFB4YPR056W TY1A-NL2Q12470 440 aa9.53□□□□□ -0.88
TFB4YPR056W TY1A-GR2Q12485 440 aa9.53□□□□□ -0.88
TFB4YPR056W AMS1P22855 1083 aa9.52□□□□□ -0.89
TFB4YPR056W YNR021WP53723 404 aaKnown RBP9.52□□□□□ -0.89
TFB4YPR056W RTF1P53064 558 aa9.51□□□□□ -0.89
TFB4YPR056W YEL077CQ3E7X8 1277 aa9.51□□□□□ -0.89
TFB4YPR056W SIT4P20604 311 aa9.5□□□□□ -0.89
TFB4YPR056W RAS1P01119 309 aa9.47□□□□□ -0.89
TFB4YPR056W KEX2P13134 814 aa9.47□□□□□ -0.89
TFB4YPR056W PAT1P25644 796 aaKnown RBP9.47□□□□□ -0.89
TFB4YPR056W ERG12P07277 443 aa9.46□□□□□ -0.9
TFB4YPR056W SPT16P32558 1035 aaKnown RBP9.46□□□□□ -0.9
TFB4YPR056W ATF2P53296 535 aa9.44□□□□□ -0.9
TFB4YPR056W YNL115CP53925 644 aa9.44□□□□□ -0.9
TFB4YPR056W NIS1P53939 407 aa9.44□□□□□ -0.9
TFB4YPR056W ERF2Q06551 359 aa9.44□□□□□ -0.9
TFB4YPR056W LEU3P08638 886 aa9.41□□□□□ -0.9
TFB4YPR056W RRN7P40992 514 aa9.41□□□□□ -0.9
TFB4YPR056W AIM7Q12156 149 aa9.41□□□□□ -0.9
TFB4YPR056W SRC1Q03707 834 aa9.4□□□□□ -0.9
TFB4YPR056W GLC3P32775 704 aa9.38□□□□□ -0.91
TFB4YPR056W FPK1P53739 893 aa9.38□□□□□ -0.91
TFB4YPR056W YMR196WQ04336 1088 aa9.37□□□□□ -0.91
TFB4YPR056W AGE1Q04412 482 aa9.37□□□□□ -0.91
TFB4YPR056W TUB4P53378 473 aa9.36□□□□□ -0.91
TFB4YPR056W HST2P53686 357 aa9.35□□□□□ -0.91
TFB4YPR056W CST6P40535 587 aa9.34□□□□□ -0.91
TFB4YPR056W LAM6Q08001 693 aa9.33□□□□□ -0.92
TFB4YPR056W PAC1P39946 494 aaKnown RBP9.32□□□□□ -0.92
TFB4YPR056W MOD5P07884 428 aa9.3□□□□□ -0.92
TFB4YPR056W SLY41P22215 453 aa9.3□□□□□ -0.92
TFB4YPR056W TRK1P12685 1235 aa9.29□□□□□ -0.92
TFB4YPR056W BDP1P46678 594 aa9.28□□□□□ -0.92
TFB4YPR056W GLN1P32288 370 aaKnown RBP9.27□□□□□ -0.93
TFB4YPR056W MMP1Q12372 583 aa9.27□□□□□ -0.93
TFB4YPR056W TPD3P31383 635 aa9.26□□□□□ -0.93
TFB4YPR056W BUB1P41695 1021 aaKnown RBP RIP-Chip data9.26□□□□□ -0.93not detected
TFB4YPR056W KXD1P53158 218 aa9.25□□□□□ -0.93
TFB4YPR056W PUS6P53294 404 aa9.25□□□□□ -0.93
TFB4YPR056W FRK1Q03002 865 aaPredicted RBP9.25□□□□□ -0.93
TFB4YPR056W RPN1P38764 993 aaKnown RBP9.24□□□□□ -0.93
TFB4YPR056W HED1Q03937 162 aa9.24□□□□□ -0.93
TFB4YPR056W SCJ1P25303 377 aa9.22□□□□□ -0.93
TFB4YPR056W HXT10P43581 546 aa9.2□□□□□ -0.94
TFB4YPR056W RPA14P50106 137 aa9.2□□□□□ -0.94
TFB4YPR056W TBF1Q02457 562 aa9.2□□□□□ -0.94
TFB4YPR056W CDC4P07834 779 aa9.19□□□□□ -0.94
TFB4YPR056W PDC1P06169 563 aaKnown RBP9.18□□□□□ -0.94
TFB4YPR056W TRM1P15565 570 aaKnown RBP9.18□□□□□ -0.94
TFB4YPR056W CSN12P47130 423 aa9.18□□□□□ -0.94
TFB4YPR056W YPR097WQ06839 1073 aa9.18□□□□□ -0.94
TFB4YPR056W KIN1P13185 1064 aa9.17□□□□□ -0.94
TFB4YPR056W ESS1P22696 170 aa9.17□□□□□ -0.94
TFB4YPR056W RRD1P40454 393 aaKnown RBP9.17□□□□□ -0.94
TFB4YPR056W CLA4P48562 842 aa9.17□□□□□ -0.94
TFB4YPR056W ALR1Q08269 859 aa9.17□□□□□ -0.94
TFB4YPR056W KTR1P27810 393 aaKnown RBP9.15□□□□□ -0.94
TFB4YPR056W AIR1P40507 360 aaKnown RBP9.15□□□□□ -0.94
TFB4YPR056W TYW1Q08960 810 aaKnown RBP9.15□□□□□ -0.94
TFB4YPR056W YDL206WQ12424 762 aa9.15□□□□□ -0.94
TFB4YPR056W RSC30P38781 883 aa9.13□□□□□ -0.95
TFB4YPR056W SSA2P10592 639 aaKnown RBP9.11□□□□□ -0.95
TFB4YPR056W YJU3P28321 313 aa9.11□□□□□ -0.95
TFB4YPR056W DMA2P53924 522 aa9.11□□□□□ -0.95
TFB4YPR056W PUS5Q06244 254 aa9.1□□□□□ -0.95
TFB4YPR056W GCR2Q01722 534 aa9.09□□□□□ -0.95
TFB4YPR056W PKH3Q03306 898 aaPredicted RBP9.09□□□□□ -0.95
TFB4YPR056W SYH1Q02875 849 aaKnown RBP9.08□□□□□ -0.96
TFB4YPR056W BRE2P43132 505 aa9.07□□□□□ -0.96
TFB4YPR056W AIM44Q99299 758 aa9.07□□□□□ -0.96
TFB4YPR056W MET32Q12041 191 aa9.05□□□□□ -0.96
TFB4YPR056W ARG8P18544 423 aa9.04□□□□□ -0.96
TFB4YPR056W AFT1P22149 690 aa9.04□□□□□ -0.96
TFB4YPR056W RAD59Q12223 238 aa9.03□□□□□ -0.96
TFB4YPR056W NAP1P25293 417 aaKnown RBP9.01□□□□□ -0.97
TFB4YPR056W ASH1P34233 588 aa9.01□□□□□ -0.97
TFB4YPR056W KIP2P28743 706 aa9□□□□□ -0.97
TFB4YPR056W HST3P53687 447 aa9□□□□□ -0.97
TFB4YPR056W VAC17P25591 423 aa8.99□□□□□ -0.97
TFB4YPR056W GUA1P38625 525 aaKnown RBP8.99□□□□□ -0.97
TFB4YPR056W IXR1P33417 597 aa8.98□□□□□ -0.97
TFB4YPR056W HPC2Q01448 625 aa8.98□□□□□ -0.97
TFB4YPR056W MRT4P33201 236 aaKnown RBP8.97□□□□□ -0.97
TFB4YPR056W RTT106P40161 455 aa8.97□□□□□ -0.97
TFB4YPR056W RLF2Q12495 606 aa8.96□□□□□ -0.98
TFB4YPR056W MSB3P48566 633 aaPredicted RBP8.95□□□□□ -0.98
TFB4YPR056W IOC4Q04213 475 aa8.93□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 52.1 ms