RNA–Protein interactions for RNA: YPL178W

CBC2, Transcript of Small subunit of the heterodimeric cap binding complex with Sto1p, yeastyeast

Gene CBC2, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBC2YPL178W TY3B-GQ99315 1547 aa8.03□□□□□ -1.12
CBC2YPL178W CKB1P43639 278 aa8.01□□□□□ -1.13
CBC2YPL178W ARO1P08566 1588 aaKnown RBP8.01□□□□□ -1.13
CBC2YPL178W EAP1P36041 632 aaKnown RBP8□□□□□ -1.13
CBC2YPL178W MSB4Q12317 492 aa8□□□□□ -1.13
CBC2YPL178W RSM7P47150 247 aa7.97□□□□□ -1.13
CBC2YPL178W BCK2P33306 851 aa7.95□□□□□ -1.14
CBC2YPL178W TRP5P00931 707 aaKnown RBP7.94□□□□□ -1.14
CBC2YPL178W BNR1P40450 1375 aa7.94□□□□□ -1.14
CBC2YPL178W YSP2Q06681 1438 aa7.93□□□□□ -1.14
CBC2YPL178W SRB8P25648 1427 aa7.92□□□□□ -1.14
CBC2YPL178W SEC61P32915 480 aa7.91□□□□□ -1.14
CBC2YPL178W RGA2Q06407 1009 aa7.91□□□□□ -1.14
CBC2YPL178W YOR093CQ12275 1648 aa7.9□□□□□ -1.14
CBC2YPL178W SET4P42948 560 aa7.89□□□□□ -1.15
CBC2YPL178W YNL035CP53962 389 aaKnown RBP7.89□□□□□ -1.15
CBC2YPL178W YOL036WQ08206 761 aa7.88□□□□□ -1.15
CBC2YPL178W IKI3Q06706 1349 aaKnown RBP7.87□□□□□ -1.15
CBC2YPL178W URN1Q06525 465 aaKnown RBP7.87□□□□□ -1.15
CBC2YPL178W BUD21Q08492 214 aaPredicted RBP7.86□□□□□ -1.15
CBC2YPL178W DNF3Q12674 1656 aa7.85□□□□□ -1.15
CBC2YPL178W YAP3P38749 330 aa7.84□□□□□ -1.15
CBC2YPL178W SAP30P38429 201 aa7.81□□□□□ -1.16
CBC2YPL178W CHL1P22516 861 aaPredicted RBP7.79□□□□□ -1.16
CBC2YPL178W TFG1P41895 735 aaPredicted RBP7.79□□□□□ -1.16
CBC2YPL178W YFR006WP43590 535 aa7.79□□□□□ -1.16
CBC2YPL178W NUP188P52593 1655 aaKnown RBP7.79□□□□□ -1.16
CBC2YPL178W YAH1Q12184 172 aaKnown RBP7.76□□□□□ -1.17
CBC2YPL178W GCN2P15442 1659 aa7.75□□□□□ -1.17
CBC2YPL178W SSM4P40318 1319 aa7.75□□□□□ -1.17
CBC2YPL178W USO1P25386 1790 aa7.72□□□□□ -1.17
CBC2YPL178W IPL1P38991 367 aa7.72□□□□□ -1.17
CBC2YPL178W MAK10Q02197 733 aa7.72□□□□□ -1.17
CBC2YPL178W PRE3P38624 215 aa7.71□□□□□ -1.18
CBC2YPL178W VMR1P38735 1592 aa7.7□□□□□ -1.18
CBC2YPL178W HAP1P0CE41 1502 aa7.69□□□□□ -1.18
CBC2YPL178W IML1P47170 1584 aa7.69□□□□□ -1.18
CBC2YPL178W DAN4P47179 1161 aa7.69□□□□□ -1.18
CBC2YPL178W YDL129WQ07555 291 aa7.69□□□□□ -1.18
CBC2YPL178W PDR5P33302 1511 aaKnown RBP7.68□□□□□ -1.18
CBC2YPL178W MRM1P25270 412 aa7.66□□□□□ -1.18
CBC2YPL178W TYS1P36421 394 aaKnown RBP7.66□□□□□ -1.18
CBC2YPL178W XDJ1P39102 459 aa7.66□□□□□ -1.18
CBC2YPL178W TY1B-NL2Q99337 1749 aaKnown RBP7.66□□□□□ -1.18
CBC2YPL178W PAF1P38351 445 aa7.65□□□□□ -1.18
CBC2YPL178W VMA1P17255 1071 aaKnown RBP7.62□□□□□ -1.19
CBC2YPL178W VRP1P37370 817 aa7.62□□□□□ -1.19
CBC2YPL178W PSD2P53037 1138 aaKnown RBP7.62□□□□□ -1.19
CBC2YPL178W JIP4Q03361 876 aa7.62□□□□□ -1.19
CBC2YPL178W RGA1P39083 1007 aa7.61□□□□□ -1.19
CBC2YPL178W SAM3Q08986 587 aa7.61□□□□□ -1.19
CBC2YPL178W DBP1P24784 617 aaKnown RBP7.6□□□□□ -1.19
CBC2YPL178W DPS1P04802 557 aaKnown RBP7.59□□□□□ -1.19
CBC2YPL178W YMR196WQ04336 1088 aa7.59□□□□□ -1.19
CBC2YPL178W YMR1P47147 688 aaKnown RBP RIP-Chip data7.58□□□□□ -1.2not detected
CBC2YPL178W NOP7P53261 605 aaKnown RBP7.57□□□□□ -1.2
CBC2YPL178W YLR271WQ06152 274 aa7.56□□□□□ -1.2
CBC2YPL178W PDR11P40550 1411 aa7.55□□□□□ -1.2
CBC2YPL178W MRX12P47084 519 aa7.54□□□□□ -1.2
CBC2YPL178W RAV1P47104 1357 aa7.54□□□□□ -1.2
CBC2YPL178W VPS29P38759 282 aa7.52□□□□□ -1.21
CBC2YPL178W THI12P42883 340 aa7.51□□□□□ -1.21
CBC2YPL178W THI5P43534 340 aa7.51□□□□□ -1.21
CBC2YPL178W THI11P47183 340 aa7.51□□□□□ -1.21
CBC2YPL178W THI13Q07748 340 aa7.51□□□□□ -1.21
CBC2YPL178W RTC1Q08281 1341 aa7.51□□□□□ -1.21
CBC2YPL178W STS1P38637 319 aa7.5□□□□□ -1.21
CBC2YPL178W NUP192P47054 1683 aa7.5□□□□□ -1.21
CBC2YPL178W BCK1Q01389 1478 aa7.49□□□□□ -1.21
CBC2YPL178W RIA1P53893 1110 aa7.49□□□□□ -1.21
CBC2YPL178W YDR344CQ05510 147 aa7.49□□□□□ -1.21
CBC2YPL178W KRE5P22023 1365 aa7.48□□□□□ -1.21
CBC2YPL178W NAP1P25293 417 aaKnown RBP7.47□□□□□ -1.21
CBC2YPL178W PTC4P38089 393 aa7.46□□□□□ -1.22
CBC2YPL178W ALD4P46367 519 aaKnown RBP7.46□□□□□ -1.22
CBC2YPL178W CFT1Q06632 1357 aaKnown RBP7.46□□□□□ -1.22
CBC2YPL178W HTA1P04911 132 aaKnown RBP7.45□□□□□ -1.22
CBC2YPL178W HTA2P04912 132 aa7.45□□□□□ -1.22
CBC2YPL178W SRC1Q03707 834 aa7.45□□□□□ -1.22
CBC2YPL178W CAB1Q04430 367 aa7.45□□□□□ -1.22
CBC2YPL178W GYP5Q12344 894 aa7.45□□□□□ -1.22
CBC2YPL178W YEL023CP39992 682 aa7.44□□□□□ -1.22
CBC2YPL178W ESL2P36168 1195 aa7.43□□□□□ -1.22
CBC2YPL178W RAD9P14737 1309 aa7.43□□□□□ -1.22
CBC2YPL178W YNR029CP53729 429 aaKnown RBP7.42□□□□□ -1.22
CBC2YPL178W DCW1P36091 449 aa7.41□□□□□ -1.22
CBC2YPL178W ELP4Q02884 456 aaKnown RBP7.41□□□□□ -1.22
CBC2YPL178W TAF5P38129 798 aa7.4□□□□□ -1.22
CBC2YPL178W RTG3P38165 486 aa7.38□□□□□ -1.23
CBC2YPL178W SCT1P32784 759 aa7.36□□□□□ -1.23
CBC2YPL178W TAF8Q03750 510 aa7.36□□□□□ -1.23
CBC2YPL178W PML39Q03760 334 aa7.33□□□□□ -1.24
CBC2YPL178W TY3B-IQ7LHG5 1498 aaKnown RBP7.32□□□□□ -1.24
CBC2YPL178W KIP3P53086 805 aaKnown RBP7.31□□□□□ -1.24
CBC2YPL178W SPE2P21182 396 aa7.3□□□□□ -1.24
CBC2YPL178W MLP1Q02455 1875 aaKnown RBP7.3□□□□□ -1.24
CBC2YPL178W TY4B-HP0C2J7 1802 aa7.29□□□□□ -1.24
CBC2YPL178W TY4B-JP47024 1803 aa7.29□□□□□ -1.24
CBC2YPL178W CPS1P27614 576 aa7.29□□□□□ -1.24
CBC2YPL178W RCM1P53972 490 aa7.29□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms