RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C YNR021WP53723 404 aaKnown RBP6.47□□□□□ -1.37
RPA43YOR340C YPR109WQ06104 294 aa6.47□□□□□ -1.37
RPA43YOR340C DIT2P21595 489 aa6.46□□□□□ -1.38
RPA43YOR340C GAR1P28007 205 aaKnown RBP6.46□□□□□ -1.38
RPA43YOR340C ISM1P48526 1002 aa6.45□□□□□ -1.38
RPA43YOR340C NUD1P32336 851 aa6.44□□□□□ -1.38
RPA43YOR340C PSE1P32337 1089 aaKnown RBP6.44□□□□□ -1.38
RPA43YOR340C GLC3P32775 704 aa6.43□□□□□ -1.38
RPA43YOR340C ERG12P07277 443 aa6.41□□□□□ -1.38
RPA43YOR340C ATF2P53296 535 aa6.4□□□□□ -1.38
RPA43YOR340C TY1B-DR4Q07793 1604 aa6.39□□□□□ -1.39
RPA43YOR340C TY1A-DR4O74302 440 aa6.38□□□□□ -1.39
RPA43YOR340C TY1A-HP0C2I4 478 aaKnown RBP6.38□□□□□ -1.39
RPA43YOR340C TY1A-AP0CX57 440 aa6.38□□□□□ -1.39
RPA43YOR340C TY1A-PR1P0CX58 440 aa6.38□□□□□ -1.39
RPA43YOR340C TY1A-ORP0CX59 440 aa6.38□□□□□ -1.39
RPA43YOR340C TY1A-PR2P0CX60 440 aa6.38□□□□□ -1.39
RPA43YOR340C TY1A-DR5P0CX65 440 aa6.38□□□□□ -1.39
RPA43YOR340C TY1A-ER2P0CX66 440 aa6.38□□□□□ -1.39
RPA43YOR340C TY1A-GR3P0CX67 440 aa6.38□□□□□ -1.39
RPA43YOR340C TY1A-LR1P0CX68 440 aa6.38□□□□□ -1.39
RPA43YOR340C TY1A-MR2P0CX69 440 aa6.38□□□□□ -1.39
RPA43YOR340C NPL4P33755 580 aa6.38□□□□□ -1.39
RPA43YOR340C CST6P40535 587 aa6.38□□□□□ -1.39
RPA43YOR340C TY1A-JR2P47099 440 aa6.38□□□□□ -1.39
RPA43YOR340C TY1A-DR1Q03856 440 aa6.38□□□□□ -1.39
RPA43YOR340C TY1A-ML1Q04706 440 aaKnown RBP6.38□□□□□ -1.39
RPA43YOR340C AIM7Q12156 149 aa6.38□□□□□ -1.39
RPA43YOR340C TY1A-BRQ12217 440 aa6.38□□□□□ -1.39
RPA43YOR340C TY1A-NL2Q12470 440 aa6.38□□□□□ -1.39
RPA43YOR340C TY1A-GR2Q12485 440 aa6.38□□□□□ -1.39
RPA43YOR340C SEC2P17065 759 aa6.37□□□□□ -1.39
RPA43YOR340C GCD11P32481 527 aaKnown RBP6.37□□□□□ -1.39
RPA43YOR340C LAM6Q08001 693 aa6.37□□□□□ -1.39
RPA43YOR340C BRE2P43132 505 aa6.36□□□□□ -1.39
RPA43YOR340C ERF2Q06551 359 aa6.36□□□□□ -1.39
RPA43YOR340C GBP2P25555 427 aaKnown RBP RIP-Chip data6.35□□□□□ -1.39not detected
RPA43YOR340C SWR1Q05471 1514 aa6.35□□□□□ -1.39
RPA43YOR340C KEX2P13134 814 aa6.34□□□□□ -1.39
RPA43YOR340C KIN1P13185 1064 aa6.34□□□□□ -1.39
RPA43YOR340C CLB5P30283 435 aa6.34□□□□□ -1.39
RPA43YOR340C AIR1P40507 360 aaKnown RBP6.34□□□□□ -1.39
RPA43YOR340C SGS1P35187 1447 aa6.33□□□□□ -1.4
RPA43YOR340C TEA1P47988 759 aa6.33□□□□□ -1.4
RPA43YOR340C TCB3Q03640 1545 aaKnown RBP6.33□□□□□ -1.4
RPA43YOR340C SPT16P32558 1035 aaKnown RBP6.32□□□□□ -1.4
RPA43YOR340C CLA4P48562 842 aa6.32□□□□□ -1.4
RPA43YOR340C GCR2Q01722 534 aa6.32□□□□□ -1.4
RPA43YOR340C CDC4P07834 779 aa6.3□□□□□ -1.4
RPA43YOR340C NIS1P53939 407 aa6.29□□□□□ -1.4
RPA43YOR340C DNA2P38859 1522 aa6.29□□□□□ -1.4
RPA43YOR340C SIT4P20604 311 aa6.28□□□□□ -1.4
RPA43YOR340C PAT1P25644 796 aaKnown RBP6.27□□□□□ -1.41
RPA43YOR340C RRN7P40992 514 aa6.27□□□□□ -1.41
RPA43YOR340C BDP1P46678 594 aa6.27□□□□□ -1.41
RPA43YOR340C HED1Q03937 162 aa6.26□□□□□ -1.41
RPA43YOR340C YNL115CP53925 644 aa6.25□□□□□ -1.41
RPA43YOR340C FRK1Q03002 865 aaPredicted RBP6.25□□□□□ -1.41
RPA43YOR340C YMR196WQ04336 1088 aa6.25□□□□□ -1.41
RPA43YOR340C FPK1P53739 893 aa6.24□□□□□ -1.41
RPA43YOR340C AGE1Q04412 482 aa6.24□□□□□ -1.41
RPA43YOR340C PAC1P39946 494 aaKnown RBP6.23□□□□□ -1.41
RPA43YOR340C RTF1P53064 558 aa6.23□□□□□ -1.41
RPA43YOR340C TUB4P53378 473 aa6.22□□□□□ -1.41
RPA43YOR340C MOD5P07884 428 aa6.21□□□□□ -1.42
RPA43YOR340C SCJ1P25303 377 aa6.21□□□□□ -1.42
RPA43YOR340C GUA1P38625 525 aaKnown RBP6.2□□□□□ -1.42
RPA43YOR340C CSN12P47130 423 aa6.2□□□□□ -1.42
RPA43YOR340C ENV9Q08651 330 aa6.2□□□□□ -1.42
RPA43YOR340C SSA2P10592 639 aaKnown RBP6.19□□□□□ -1.42
RPA43YOR340C SLY41P22215 453 aa6.19□□□□□ -1.42
RPA43YOR340C MET22P32179 357 aa6.19□□□□□ -1.42
RPA43YOR340C GLN1P32288 370 aaKnown RBP6.18□□□□□ -1.42
RPA43YOR340C HST2P53686 357 aa6.18□□□□□ -1.42
RPA43YOR340C TYW1Q08960 810 aaKnown RBP6.17□□□□□ -1.42
RPA43YOR340C MMP1Q12372 583 aa6.17□□□□□ -1.42
RPA43YOR340C KOG1P38873 1557 aa6.17□□□□□ -1.42
RPA43YOR340C HGH1P48362 394 aaKnown RBP6.16□□□□□ -1.42
RPA43YOR340C DMA2P53924 522 aa6.16□□□□□ -1.42
RPA43YOR340C HSL1P34244 1518 aa6.15□□□□□ -1.42
RPA43YOR340C HPC2Q01448 625 aa6.15□□□□□ -1.42
RPA43YOR340C AFT1P22149 690 aa6.14□□□□□ -1.43
RPA43YOR340C ESS1P22696 170 aa6.14□□□□□ -1.43
RPA43YOR340C KTR1P27810 393 aaKnown RBP6.14□□□□□ -1.43
RPA43YOR340C MET32Q12041 191 aa6.14□□□□□ -1.43
RPA43YOR340C BRL1P38770 471 aa6.13□□□□□ -1.43
RPA43YOR340C PKH3Q03306 898 aaPredicted RBP6.13□□□□□ -1.43
RPA43YOR340C PUS6P53294 404 aa6.12□□□□□ -1.43
RPA43YOR340C MTC5Q03897 1148 aa6.12□□□□□ -1.43
RPA43YOR340C YDR444WQ04093 687 aa6.12□□□□□ -1.43
RPA43YOR340C SPT6P23615 1451 aaKnown RBP6.11□□□□□ -1.43
RPA43YOR340C YJU3P28321 313 aa6.11□□□□□ -1.43
RPA43YOR340C ASH1P34233 588 aa6.11□□□□□ -1.43
RPA43YOR340C TFB3Q03290 321 aa6.11□□□□□ -1.43
RPA43YOR340C LCB5Q06147 687 aaKnown RBP6.11□□□□□ -1.43
RPA43YOR340C PUS5Q06244 254 aa6.11□□□□□ -1.43
RPA43YOR340C TRM1P15565 570 aaKnown RBP6.1□□□□□ -1.43
RPA43YOR340C TPD3P31383 635 aa6.1□□□□□ -1.43
RPA43YOR340C PDC1P06169 563 aaKnown RBP6.09□□□□□ -1.43
RPA43YOR340C KXD1P53158 218 aa6.09□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 57 ms