RNA–Protein interactions for RNA: YMR050C

YMR050C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YMR050C, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR050CYMR050C SPT21P35209 758 aa3.15□□□□□ -1.91
YMR050CYMR050C ISW2Q08773 1120 aa3.15□□□□□ -1.91
YMR050CYMR050C YDR341CQ05506 607 aaKnown RBP3.14□□□□□ -1.91
YMR050CYMR050C GRX1P25373 110 aaKnown RBP3.14□□□□□ -1.91
YMR050CYMR050C DID4P36108 232 aa3.14□□□□□ -1.91
YMR050CYMR050C MSC7P38694 644 aa3.14□□□□□ -1.91
YMR050CYMR050C MSB4Q12317 492 aa3.14□□□□□ -1.91
YMR050CYMR050C NBL1Q3E7Y6 73 aa3.14□□□□□ -1.91
YMR050CYMR050C MON2P48563 1636 aaPredicted RBP3.14□□□□□ -1.91
YMR050CYMR050C GRX4P32642 244 aa3.14□□□□□ -1.91
YMR050CYMR050C ALT2P52892 507 aa3.14□□□□□ -1.91
YMR050CYMR050C PAN1P32521 1480 aa3.14□□□□□ -1.91
YMR050CYMR050C FAA3P39002 694 aa3.13□□□□□ -1.91
YMR050CYMR050C TPM2P40414 161 aa3.13□□□□□ -1.91
YMR050CYMR050C JIP4Q03361 876 aa3.13□□□□□ -1.91
YMR050CYMR050C RPN8Q08723 338 aaKnown RBP3.13□□□□□ -1.91
YMR050CYMR050C POL30P15873 258 aaKnown RBP3.13□□□□□ -1.91
YMR050CYMR050C YIL055CP40523 627 aaKnown RBP3.13□□□□□ -1.91
YMR050CYMR050C YGL081WP53156 320 aa3.13□□□□□ -1.91
YMR050CYMR050C UTP13Q05946 817 aaKnown RBP3.13□□□□□ -1.91
YMR050CYMR050C CTT1P06115 562 aa3.13□□□□□ -1.91
YMR050CYMR050C RMT2Q03305 412 aa3.13□□□□□ -1.91
YMR050CYMR050C YMR074CQ04773 145 aa3.13□□□□□ -1.91
YMR050CYMR050C CFT2Q12102 859 aaPredicted RBP3.13□□□□□ -1.91
YMR050CYMR050C RMD1Q03441 430 aa3.13□□□□□ -1.91
YMR050CYMR050C NUP157P40064 1391 aaKnown RBP3.12□□□□□ -1.91
YMR050CYMR050C XRN1P22147 1528 aaKnown RBP3.12□□□□□ -1.91
YMR050CYMR050C RAD9P14737 1309 aa3.12□□□□□ -1.91
YMR050CYMR050C VPS35P34110 944 aa3.12□□□□□ -1.91
YMR050CYMR050C STM1P39015 273 aaKnown RBP3.12□□□□□ -1.91
YMR050CYMR050C LYS14P40971 790 aa3.12□□□□□ -1.91
YMR050CYMR050C YAH1Q12184 172 aaKnown RBP3.12□□□□□ -1.91
YMR050CYMR050C MET5P47169 1442 aa3.12□□□□□ -1.91
YMR050CYMR050C SQS1P53866 767 aaKnown RBP3.12□□□□□ -1.91
YMR050CYMR050C YDL129WQ07555 291 aa3.12□□□□□ -1.91
YMR050CYMR050C TY1B-AO13527 1196 aaKnown RBP3.12□□□□□ -1.91
YMR050CYMR050C ENT1Q12518 454 aa3.12□□□□□ -1.91
YMR050CYMR050C SEC3P33332 1336 aaKnown RBP3.12□□□□□ -1.91
YMR050CYMR050C STU1P38198 1513 aa3.12□□□□□ -1.91
YMR050CYMR050C GLC3P32775 704 aa3.12□□□□□ -1.91
YMR050CYMR050C SAS3P34218 831 aa3.12□□□□□ -1.91
YMR050CYMR050C BDF1P35817 686 aa3.12□□□□□ -1.91
YMR050CYMR050C YKL133CP36066 463 aa3.12□□□□□ -1.91
YMR050CYMR050C VAB2P40003 282 aa3.12□□□□□ -1.91
YMR050CYMR050C SEM1O94742 89 aa3.11□□□□□ -1.91
YMR050CYMR050C HSP104P31539 908 aaKnown RBP3.11□□□□□ -1.91
YMR050CYMR050C LIF1P53150 421 aa3.11□□□□□ -1.91
YMR050CYMR050C TFC8Q12308 588 aa3.11□□□□□ -1.91
YMR050CYMR050C SPT2P06843 333 aaPredicted RBP3.11□□□□□ -1.91
YMR050CYMR050C YKR023WP36119 530 aaKnown RBP3.11□□□□□ -1.91
YMR050CYMR050C SSA1P10591 642 aaKnown RBP3.11□□□□□ -1.91
YMR050CYMR050C RPN1P38764 993 aaKnown RBP3.11□□□□□ -1.91
YMR050CYMR050C SLN1P39928 1220 aaPredicted RBP3.11□□□□□ -1.91
YMR050CYMR050C BUD27P43573 796 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
YMR050CYMR050C MTR4P47047 1073 aaKnown RBP3.11□□□□□ -1.91
YMR050CYMR050C ORC1P54784 914 aaPredicted RBP3.11□□□□□ -1.91
YMR050CYMR050C EIS1Q05050 843 aaKnown RBP3.11□□□□□ -1.91
YMR050CYMR050C THO2P53552 1597 aaKnown RBP3.11□□□□□ -1.91
YMR050CYMR050C SRC1Q03707 834 aa3.11□□□□□ -1.91
YMR050CYMR050C MRD1Q06106 887 aaKnown RBP3.11□□□□□ -1.91
YMR050CYMR050C SSP2Q08646 371 aa3.11□□□□□ -1.91
YMR050CYMR050C NUP159P40477 1460 aa3.1□□□□□ -1.91
YMR050CYMR050C YKL222CP35995 705 aa3.1□□□□□ -1.91
YMR050CYMR050C ITT1Q04638 464 aa3.1□□□□□ -1.91
YMR050CYMR050C TAF10Q12030 206 aa3.1□□□□□ -1.91
YMR050CYMR050C LEU2P04173 364 aaPredicted RBP3.1□□□□□ -1.91
YMR050CYMR050C YEL1P34225 687 aa3.1□□□□□ -1.91
YMR050CYMR050C TPS3P38426 1054 aaKnown RBP3.1□□□□□ -1.91
YMR050CYMR050C NMD3P38861 518 aaKnown RBP3.1□□□□□ -1.91
YMR050CYMR050C YFL040WP43562 540 aa3.1□□□□□ -1.91
YMR050CYMR050C JJJ1P53863 590 aa3.1□□□□□ -1.91
YMR050CYMR050C RAT1Q02792 1006 aaKnown RBP3.1□□□□□ -1.91
YMR050CYMR050C YOL036WQ08206 761 aa3.1□□□□□ -1.91
YMR050CYMR050C MMS22Q06164 1454 aa3.1□□□□□ -1.91
YMR050CYMR050C DPS1P04802 557 aaKnown RBP3.1□□□□□ -1.91
YMR050CYMR050C RAD2P07276 1031 aa3.1□□□□□ -1.91
YMR050CYMR050C SPE2P21182 396 aa3.1□□□□□ -1.91
YMR050CYMR050C SGM1P47166 707 aa3.1□□□□□ -1.91
YMR050CYMR050C DOS2P54858 310 aa3.09□□□□□ -1.91
YMR050CYMR050C TIF6Q12522 245 aaKnown RBP3.09□□□□□ -1.91
YMR050CYMR050C MMF1P40185 145 aaKnown RBP3.09□□□□□ -1.91
YMR050CYMR050C ALG2P43636 503 aa3.09□□□□□ -1.91
YMR050CYMR050C CTF4Q01454 927 aa3.09□□□□□ -1.91
YMR050CYMR050C TIM50Q02776 476 aa3.09□□□□□ -1.91
YMR050CYMR050C CWC15Q03772 175 aaKnown RBP3.09□□□□□ -1.91
YMR050CYMR050C YJU2P28320 278 aaPredicted RBP3.09□□□□□ -1.91
YMR050CYMR050C TFC4P33339 1025 aa3.09□□□□□ -1.91
YMR050CYMR050C PIP2P52960 996 aa3.09□□□□□ -1.91
YMR050CYMR050C STS1P38637 319 aa3.09□□□□□ -1.92
YMR050CYMR050C JJJ2P46997 583 aa3.09□□□□□ -1.92
YMR050CYMR050C YRB30P53107 440 aaPredicted RBP3.09□□□□□ -1.92
YMR050CYMR050C RRT6P53117 311 aaPredicted RBP3.09□□□□□ -1.92
YMR050CYMR050C RXT2P38255 430 aa3.08□□□□□ -1.92
YMR050CYMR050C THI12P42883 340 aa3.08□□□□□ -1.92
YMR050CYMR050C THI5P43534 340 aa3.08□□□□□ -1.92
YMR050CYMR050C THI11P47183 340 aa3.08□□□□□ -1.92
YMR050CYMR050C THI13Q07748 340 aa3.08□□□□□ -1.92
YMR050CYMR050C MYO2P19524 1574 aaKnown RBP3.08□□□□□ -1.92
YMR050CYMR050C RIM101P33400 625 aa3.08□□□□□ -1.92
YMR050CYMR050C APL2P36000 726 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms