RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C TY1A-DR5P0CX65 440 aa7.95□□□□□ -1.14
SUB1YMR039C TY1A-ER2P0CX66 440 aa7.95□□□□□ -1.14
SUB1YMR039C TY1A-GR3P0CX67 440 aa7.95□□□□□ -1.14
SUB1YMR039C TY1A-LR1P0CX68 440 aa7.95□□□□□ -1.14
SUB1YMR039C TY1A-MR2P0CX69 440 aa7.95□□□□□ -1.14
SUB1YMR039C TY1A-JR2P47099 440 aa7.95□□□□□ -1.14
SUB1YMR039C TY1A-DR1Q03856 440 aa7.95□□□□□ -1.14
SUB1YMR039C TY1A-ML1Q04706 440 aaKnown RBP7.95□□□□□ -1.14
SUB1YMR039C TY1A-BRQ12217 440 aa7.95□□□□□ -1.14
SUB1YMR039C TY1A-NL2Q12470 440 aa7.95□□□□□ -1.14
SUB1YMR039C TY1A-GR2Q12485 440 aa7.95□□□□□ -1.14
SUB1YMR039C SEC2P17065 759 aa7.94□□□□□ -1.14
SUB1YMR039C GCD11P32481 527 aaKnown RBP7.94□□□□□ -1.14
SUB1YMR039C GLC3P32775 704 aa7.94□□□□□ -1.14
SUB1YMR039C ATF2P53296 535 aa7.94□□□□□ -1.14
SUB1YMR039C SIT4P20604 311 aa7.93□□□□□ -1.14
SUB1YMR039C AIM7Q12156 149 aa7.93□□□□□ -1.14
SUB1YMR039C MRF1P30775 413 aaPredicted RBP7.92□□□□□ -1.14
SUB1YMR039C RTF1P53064 558 aa7.92□□□□□ -1.14
SUB1YMR039C NIS1P53939 407 aa7.92□□□□□ -1.14
SUB1YMR039C KEX2P13134 814 aa7.91□□□□□ -1.14
SUB1YMR039C SDH2P21801 266 aa7.9□□□□□ -1.14
SUB1YMR039C SRC1Q03707 834 aa7.89□□□□□ -1.15
SUB1YMR039C ERF2Q06551 359 aa7.89□□□□□ -1.15
SUB1YMR039C YNL115CP53925 644 aa7.88□□□□□ -1.15
SUB1YMR039C FPK1P53739 893 aa7.87□□□□□ -1.15
SUB1YMR039C YMR196WQ04336 1088 aa7.86□□□□□ -1.15
SUB1YMR039C AMS1P22855 1083 aa7.85□□□□□ -1.15
SUB1YMR039C PAT1P25644 796 aaKnown RBP7.85□□□□□ -1.15
SUB1YMR039C SPT16P32558 1035 aaKnown RBP7.85□□□□□ -1.15
SUB1YMR039C RPN1P38764 993 aaKnown RBP7.85□□□□□ -1.15
SUB1YMR039C YEL077CQ3E7X8 1277 aa7.85□□□□□ -1.15
SUB1YMR039C RRN7P40992 514 aa7.83□□□□□ -1.16
SUB1YMR039C HST2P53686 357 aa7.83□□□□□ -1.16
SUB1YMR039C ERG12P07277 443 aa7.82□□□□□ -1.16
SUB1YMR039C AGE1Q04412 482 aa7.82□□□□□ -1.16
SUB1YMR039C RAS1P01119 309 aa7.81□□□□□ -1.16
SUB1YMR039C TUB4P53378 473 aa7.8□□□□□ -1.16
SUB1YMR039C SLY41P22215 453 aa7.78□□□□□ -1.16
SUB1YMR039C PAC1P39946 494 aaKnown RBP7.78□□□□□ -1.16
SUB1YMR039C KIN1P13185 1064 aa7.77□□□□□ -1.17
SUB1YMR039C GLN1P32288 370 aaKnown RBP7.77□□□□□ -1.17
SUB1YMR039C MMP1Q12372 583 aa7.77□□□□□ -1.17
SUB1YMR039C SCJ1P25303 377 aa7.75□□□□□ -1.17
SUB1YMR039C CST6P40535 587 aa7.75□□□□□ -1.17
SUB1YMR039C LAM6Q08001 693 aa7.74□□□□□ -1.17
SUB1YMR039C MOD5P07884 428 aa7.73□□□□□ -1.17
SUB1YMR039C CSN12P47130 423 aa7.73□□□□□ -1.17
SUB1YMR039C PUS6P53294 404 aa7.73□□□□□ -1.17
SUB1YMR039C RGA2Q06407 1009 aa7.73□□□□□ -1.17
SUB1YMR039C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.72□□□□□ -1.17not detected
SUB1YMR039C ESS1P22696 170 aa7.71□□□□□ -1.18
SUB1YMR039C KTR1P27810 393 aaKnown RBP7.71□□□□□ -1.18
SUB1YMR039C BDP1P46678 594 aa7.71□□□□□ -1.18
SUB1YMR039C TYW1Q08960 810 aaKnown RBP7.71□□□□□ -1.18
SUB1YMR039C KXD1P53158 218 aa7.7□□□□□ -1.18
SUB1YMR039C TRM1P15565 570 aaKnown RBP7.69□□□□□ -1.18
SUB1YMR039C TPD3P31383 635 aa7.69□□□□□ -1.18
SUB1YMR039C TBF1Q02457 562 aa7.69□□□□□ -1.18
SUB1YMR039C FRK1Q03002 865 aaPredicted RBP7.69□□□□□ -1.18
SUB1YMR039C RGA1P39083 1007 aa7.68□□□□□ -1.18
SUB1YMR039C SSA2P10592 639 aaKnown RBP7.67□□□□□ -1.18
SUB1YMR039C YJU3P28321 313 aa7.67□□□□□ -1.18
SUB1YMR039C RPA14P50106 137 aa7.67□□□□□ -1.18
SUB1YMR039C PDC1P06169 563 aaKnown RBP7.66□□□□□ -1.18
SUB1YMR039C HXT10P43581 546 aa7.66□□□□□ -1.18
SUB1YMR039C YDL206WQ12424 762 aa7.66□□□□□ -1.18
SUB1YMR039C RSC30P38781 883 aa7.65□□□□□ -1.18
SUB1YMR039C RRD1P40454 393 aaKnown RBP7.65□□□□□ -1.18
SUB1YMR039C PKH3Q03306 898 aaPredicted RBP7.65□□□□□ -1.18
SUB1YMR039C YPR097WQ06839 1073 aa7.65□□□□□ -1.18
SUB1YMR039C TRK1P12685 1235 aa7.64□□□□□ -1.19
SUB1YMR039C HED1Q03937 162 aa7.64□□□□□ -1.19
SUB1YMR039C ALR1Q08269 859 aa7.64□□□□□ -1.19
SUB1YMR039C GUA1P38625 525 aaKnown RBP7.62□□□□□ -1.19
SUB1YMR039C CLA4P48562 842 aa7.62□□□□□ -1.19
SUB1YMR039C ARG8P18544 423 aa7.6□□□□□ -1.19
SUB1YMR039C AIR1P40507 360 aaKnown RBP7.6□□□□□ -1.19
SUB1YMR039C CDC4P07834 779 aa7.59□□□□□ -1.19
SUB1YMR039C LEO1P38439 464 aa7.59□□□□□ -1.19
SUB1YMR039C PUS5Q06244 254 aa7.59□□□□□ -1.19
SUB1YMR039C RAD59Q12223 238 aa7.59□□□□□ -1.19
SUB1YMR039C HPC2Q01448 625 aa7.58□□□□□ -1.2
SUB1YMR039C SYH1Q02875 849 aaKnown RBP7.55□□□□□ -1.2
SUB1YMR039C VAC17P25591 423 aa7.51□□□□□ -1.21
SUB1YMR039C MET32Q12041 191 aa7.51□□□□□ -1.21
SUB1YMR039C KIP2P28743 706 aa7.5□□□□□ -1.21
SUB1YMR039C MAK16P10962 306 aaPredicted RBP7.49□□□□□ -1.21
SUB1YMR039C BRL1P38770 471 aa7.49□□□□□ -1.21
SUB1YMR039C AFT1P22149 690 aa7.48□□□□□ -1.21
SUB1YMR039C IXR1P33417 597 aa7.48□□□□□ -1.21
SUB1YMR039C CSE4P36012 229 aa7.48□□□□□ -1.21
SUB1YMR039C BRE2P43132 505 aa7.47□□□□□ -1.21
SUB1YMR039C TFB3Q03290 321 aa7.47□□□□□ -1.21
SUB1YMR039C ASH1P34233 588 aa7.46□□□□□ -1.22
SUB1YMR039C FIG4P42837 879 aa7.46□□□□□ -1.22
SUB1YMR039C GCR2Q01722 534 aa7.46□□□□□ -1.22
SUB1YMR039C MRT4P33201 236 aaKnown RBP7.45□□□□□ -1.22
SUB1YMR039C HST3P53687 447 aa7.44□□□□□ -1.22
SUB1YMR039C NAF1P53919 492 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms