RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	TY1A-OR	P0CX59	440 aa		10.12	□□□□□ -0.79
RSA3	YLR221C	TY1A-PR2	P0CX60	440 aa		10.12	□□□□□ -0.79
RSA3	YLR221C	TY1A-DR5	P0CX65	440 aa		10.12	□□□□□ -0.79
RSA3	YLR221C	TY1A-ER2	P0CX66	440 aa		10.12	□□□□□ -0.79
RSA3	YLR221C	TY1A-GR3	P0CX67	440 aa		10.12	□□□□□ -0.79
RSA3	YLR221C	TY1A-LR1	P0CX68	440 aa		10.12	□□□□□ -0.79
RSA3	YLR221C	TY1A-MR2	P0CX69	440 aa		10.12	□□□□□ -0.79
RSA3	YLR221C	TY1A-JR2	P47099	440 aa		10.12	□□□□□ -0.79
RSA3	YLR221C	TY1A-DR1	Q03856	440 aa		10.12	□□□□□ -0.79
RSA3	YLR221C	TY1A-ML1	Q04706	440 aa	Known RBP	10.12	□□□□□ -0.79
RSA3	YLR221C	TY1A-BR	Q12217	440 aa		10.12	□□□□□ -0.79
RSA3	YLR221C	MAM3	Q12296	706 aa		10.12	□□□□□ -0.79
RSA3	YLR221C	TY1A-NL2	Q12470	440 aa		10.12	□□□□□ -0.79
RSA3	YLR221C	TY1A-GR2	Q12485	440 aa		10.12	□□□□□ -0.79
RSA3	YLR221C	SEC2	P17065	759 aa		10.1	□□□□□ -0.79
RSA3	YLR221C	PSE1	P32337	1089 aa	Known RBP	10.09	□□□□□ -0.79
RSA3	YLR221C	ERG12	P07277	443 aa		10.08	□□□□□ -0.8
RSA3	YLR221C	IES2	P40154	320 aa		10.06	□□□□□ -0.8
RSA3	YLR221C	TRK1	P12685	1235 aa		10.05	□□□□□ -0.8
RSA3	YLR221C	SPT16	P32558	1035 aa	Known RBP	10.05	□□□□□ -0.8
RSA3	YLR221C	YNR021W	P53723	404 aa	Known RBP	10.04	□□□□□ -0.8
RSA3	YLR221C	KEX2	P13134	814 aa		10.02	□□□□□ -0.81
RSA3	YLR221C	RRN7	P40992	514 aa		10.02	□□□□□ -0.81
RSA3	YLR221C	CST6	P40535	587 aa		10.01	□□□□□ -0.81
RSA3	YLR221C	ERF2	Q06551	359 aa		10	□□□□□ -0.81
RSA3	YLR221C	DMA2	P53924	522 aa		9.99	□□□□□ -0.81
RSA3	YLR221C	CLB5	P30283	435 aa		9.98	□□□□□ -0.81
RSA3	YLR221C	NUP42	P49686	430 aa	Known RBP	9.97	□□□□□ -0.81
RSA3	YLR221C	PAT1	P25644	796 aa	Known RBP	9.96	□□□□□ -0.82
RSA3	YLR221C	FRK1	Q03002	865 aa	Predicted RBP	9.94	□□□□□ -0.82
RSA3	YLR221C	LAM6	Q08001	693 aa		9.94	□□□□□ -0.82
RSA3	YLR221C	AIM7	Q12156	149 aa		9.94	□□□□□ -0.82
RSA3	YLR221C	KIN1	P13185	1064 aa		9.93	□□□□□ -0.82
RSA3	YLR221C	GLC3	P32775	704 aa		9.91	□□□□□ -0.82
RSA3	YLR221C	CLA4	P48562	842 aa		9.91	□□□□□ -0.82
RSA3	YLR221C	DIT2	P21595	489 aa		9.9	□□□□□ -0.82
RSA3	YLR221C	AIR1	P40507	360 aa	Known RBP	9.9	□□□□□ -0.82
RSA3	YLR221C	TEA1	P47988	759 aa		9.9	□□□□□ -0.82
RSA3	YLR221C	BDP1	P46678	594 aa		9.89	□□□□□ -0.83
RSA3	YLR221C	PAC1	P39946	494 aa	Known RBP	9.87	□□□□□ -0.83
RSA3	YLR221C	RTF1	P53064	558 aa		9.86	□□□□□ -0.83
RSA3	YLR221C	AGE1	Q04412	482 aa		9.85	□□□□□ -0.83
RSA3	YLR221C	TUB4	P53378	473 aa		9.84	□□□□□ -0.83
RSA3	YLR221C	YNL115C	P53925	644 aa		9.84	□□□□□ -0.83
RSA3	YLR221C	NIS1	P53939	407 aa		9.84	□□□□□ -0.83
RSA3	YLR221C	HGH1	P48362	394 aa	Known RBP	9.83	□□□□□ -0.84
RSA3	YLR221C	ATF2	P53296	535 aa		9.83	□□□□□ -0.84
RSA3	YLR221C	SIT4	P20604	311 aa		9.82	□□□□□ -0.84
RSA3	YLR221C	MOD5	P07884	428 aa		9.78	□□□□□ -0.84
RSA3	YLR221C	BRE2	P43132	505 aa		9.78	□□□□□ -0.84
RSA3	YLR221C	CDC4	P07834	779 aa		9.77	□□□□□ -0.85
RSA3	YLR221C	HED1	Q03937	162 aa		9.76	□□□□□ -0.85
RSA3	YLR221C	FPK1	P53739	893 aa		9.75	□□□□□ -0.85
RSA3	YLR221C	YMR196W	Q04336	1088 aa		9.74	□□□□□ -0.85
RSA3	YLR221C	RLF2	Q12495	606 aa		9.74	□□□□□ -0.85
RSA3	YLR221C	GCR2	Q01722	534 aa		9.72	□□□□□ -0.85
RSA3	YLR221C	PUS5	Q06244	254 aa		9.72	□□□□□ -0.85
RSA3	YLR221C	SLY41	P22215	453 aa		9.71	□□□□□ -0.86
RSA3	YLR221C	GUA1	P38625	525 aa	Known RBP	9.68	□□□□□ -0.86
RSA3	YLR221C	KXD1	P53158	218 aa		9.68	□□□□□ -0.86
RSA3	YLR221C	RGA1	P39083	1007 aa		9.66	□□□□□ -0.86
RSA3	YLR221C	HPC2	Q01448	625 aa		9.66	□□□□□ -0.86
RSA3	YLR221C	MET32	Q12041	191 aa		9.65	□□□□□ -0.86
RSA3	YLR221C	SCJ1	P25303	377 aa		9.64	□□□□□ -0.87
RSA3	YLR221C	PDC1	P06169	563 aa	Known RBP	9.63	□□□□□ -0.87
RSA3	YLR221C	HXT10	P43581	546 aa		9.63	□□□□□ -0.87
RSA3	YLR221C	HST2	P53686	357 aa		9.63	□□□□□ -0.87
RSA3	YLR221C	TPD3	P31383	635 aa		9.62	□□□□□ -0.87
RSA3	YLR221C	RRD1	P40454	393 aa	Known RBP	9.61	□□□□□ -0.87
RSA3	YLR221C	PUS6	P53294	404 aa		9.61	□□□□□ -0.87
RSA3	YLR221C	TBF1	Q02457	562 aa		9.61	□□□□□ -0.87
RSA3	YLR221C	ASH1	P34233	588 aa		9.6	□□□□□ -0.87
RSA3	YLR221C	YDL206W	Q12424	762 aa		9.6	□□□□□ -0.87
RSA3	YLR221C	SSA2	P10592	639 aa	Known RBP	9.59	□□□□□ -0.87
RSA3	YLR221C	MMP1	Q12372	583 aa		9.59	□□□□□ -0.87
RSA3	YLR221C	AFT1	P22149	690 aa		9.58	□□□□□ -0.88
RSA3	YLR221C	GAR1	P28007	205 aa	Known RBP	9.58	□□□□□ -0.88
RSA3	YLR221C	HST3	P53687	447 aa		9.58	□□□□□ -0.88
RSA3	YLR221C	TRM1	P15565	570 aa	Known RBP	9.57	□□□□□ -0.88
RSA3	YLR221C	RPA14	P50106	137 aa		9.57	□□□□□ -0.88
RSA3	YLR221C	ALR1	Q08269	859 aa		9.57	□□□□□ -0.88
RSA3	YLR221C	GLN1	P32288	370 aa	Known RBP	9.56	□□□□□ -0.88
RSA3	YLR221C	BRL1	P38770	471 aa		9.56	□□□□□ -0.88
RSA3	YLR221C	ESS1	P22696	170 aa		9.54	□□□□□ -0.88
RSA3	YLR221C	CSN12	P47130	423 aa		9.54	□□□□□ -0.88
RSA3	YLR221C	SYH1	Q02875	849 aa	Known RBP	9.54	□□□□□ -0.88
RSA3	YLR221C	TFB3	Q03290	321 aa		9.54	□□□□□ -0.88
RSA3	YLR221C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	9.53	□□□□□ -0.88	not detected
RSA3	YLR221C	YPR097W	Q06839	1073 aa		9.53	□□□□□ -0.88
RSA3	YLR221C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	9.52	□□□□□ -0.89	not detected
RSA3	YLR221C	MET22	P32179	357 aa		9.52	□□□□□ -0.89
RSA3	YLR221C	YPL062W	Q02781	134 aa		9.51	□□□□□ -0.89
RSA3	YLR221C	TYW1	Q08960	810 aa	Known RBP	9.51	□□□□□ -0.89
RSA3	YLR221C	YJU3	P28321	313 aa		9.49	□□□□□ -0.89
RSA3	YLR221C	KIP2	P28743	706 aa		9.49	□□□□□ -0.89
RSA3	YLR221C	ENV9	Q08651	330 aa		9.49	□□□□□ -0.89
RSA3	YLR221C	RGA2	Q06407	1009 aa		9.48	□□□□□ -0.89
RSA3	YLR221C	YJR115W	P47152	169 aa		9.46	□□□□□ -0.9
RSA3	YLR221C	YDR444W	Q04093	687 aa		9.45	□□□□□ -0.9
RSA3	YLR221C	IXR1	P33417	597 aa		9.44	□□□□□ -0.9

Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms