RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeastyeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PWP1YLR196W GCN2P15442 1659 aa6.38□□□□□ -1.39
PWP1YLR196W NTE1Q04958 1679 aa6.38□□□□□ -1.39
PWP1YLR196W YSH1Q06224 779 aaPredicted RBP6.38□□□□□ -1.39
PWP1YLR196W RPO21P04050 1733 aaKnown RBP6.36□□□□□ -1.39
PWP1YLR196W NUP159P40477 1460 aa6.36□□□□□ -1.39
PWP1YLR196W IME2P32581 645 aa6.35□□□□□ -1.39
PWP1YLR196W PEA2P40091 420 aa6.34□□□□□ -1.39
PWP1YLR196W NNF2P53253 936 aa6.34□□□□□ -1.39
PWP1YLR196W TPO2P53283 614 aa6.34□□□□□ -1.39
PWP1YLR196W GDB1Q06625 1536 aa6.34□□□□□ -1.39
PWP1YLR196W ARO1P08566 1588 aaKnown RBP6.34□□□□□ -1.4
PWP1YLR196W ASF1P32447 279 aa6.33□□□□□ -1.4
PWP1YLR196W RIM101P33400 625 aa6.33□□□□□ -1.4
PWP1YLR196W NST1P53935 1240 aa6.33□□□□□ -1.4
PWP1YLR196W DMA2P53924 522 aa6.33□□□□□ -1.4
PWP1YLR196W GEA2P39993 1459 aaKnown RBP6.33□□□□□ -1.4
PWP1YLR196W PRS1P32895 427 aaKnown RBP6.32□□□□□ -1.4
PWP1YLR196W YMR196WQ04336 1088 aa6.32□□□□□ -1.4
PWP1YLR196W RPA190P10964 1664 aaKnown RBP6.32□□□□□ -1.4
PWP1YLR196W CAT8P39113 1433 aa6.32□□□□□ -1.4
PWP1YLR196W PET111P08468 800 aa6.31□□□□□ -1.4
PWP1YLR196W LEU3P08638 886 aa6.31□□□□□ -1.4
PWP1YLR196W CDC11P32458 415 aa6.31□□□□□ -1.4
PWP1YLR196W ISW1P38144 1129 aa6.31□□□□□ -1.4
PWP1YLR196W ATG36P46983 293 aa6.31□□□□□ -1.4
PWP1YLR196W ABP1P15891 592 aaKnown RBP6.3□□□□□ -1.4
PWP1YLR196W APL5Q08951 932 aaKnown RBP6.3□□□□□ -1.4
PWP1YLR196W MCM1P11746 286 aa6.3□□□□□ -1.4
PWP1YLR196W BYE1P36106 594 aa6.3□□□□□ -1.4
PWP1YLR196W YKR023WP36119 530 aaKnown RBP6.3□□□□□ -1.4
PWP1YLR196W SIC1P38634 284 aa6.3□□□□□ -1.4
PWP1YLR196W MSH4P40965 878 aaPredicted RBP6.3□□□□□ -1.4
PWP1YLR196W SAP190P36123 1033 aa6.29□□□□□ -1.4
PWP1YLR196W SRB8P25648 1427 aa6.29□□□□□ -1.4
PWP1YLR196W TAN1P53072 289 aaPredicted RBP6.28□□□□□ -1.4
PWP1YLR196W DAL5P15365 543 aa6.28□□□□□ -1.4
PWP1YLR196W MSH3P25336 1018 aa6.28□□□□□ -1.4
PWP1YLR196W RTS3P53289 263 aa6.28□□□□□ -1.4
PWP1YLR196W BUD3P25558 1636 aa6.27□□□□□ -1.4
PWP1YLR196W YLR419WQ06698 1435 aaKnown RBP6.27□□□□□ -1.41
PWP1YLR196W TAF13P11747 167 aa6.27□□□□□ -1.41
PWP1YLR196W HSC82P15108 705 aaKnown RBP6.27□□□□□ -1.41
PWP1YLR196W HOS4P40480 1083 aa6.27□□□□□ -1.41
PWP1YLR196W DOS2P54858 310 aa6.27□□□□□ -1.41
PWP1YLR196W ECM16Q04217 1267 aaKnown RBP6.27□□□□□ -1.41
PWP1YLR196W RPN7Q06103 429 aaKnown RBP6.27□□□□□ -1.41
PWP1YLR196W PDR5P33302 1511 aaKnown RBP6.27□□□□□ -1.41
PWP1YLR196W PSD2P53037 1138 aaKnown RBP6.26□□□□□ -1.41
PWP1YLR196W KIP3P53086 805 aaKnown RBP6.26□□□□□ -1.41
PWP1YLR196W LTV1P34078 463 aa6.25□□□□□ -1.41
PWP1YLR196W SEC9P40357 651 aa6.25□□□□□ -1.41
PWP1YLR196W LAM6Q08001 693 aa6.25□□□□□ -1.41
PWP1YLR196W NOP8Q08287 484 aaPredicted RBP6.25□□□□□ -1.41
PWP1YLR196W CFT2Q12102 859 aaPredicted RBP6.25□□□□□ -1.41
PWP1YLR196W SPO14P36126 1683 aa6.25□□□□□ -1.41
PWP1YLR196W TY1B-AO13527 1196 aaKnown RBP6.25□□□□□ -1.41
PWP1YLR196W RRP14P36080 434 aaKnown RBP6.25□□□□□ -1.41
PWP1YLR196W LEM3P42838 414 aa6.25□□□□□ -1.41
PWP1YLR196W OSW7P43611 510 aa6.25□□□□□ -1.41
PWP1YLR196W BUD21Q08492 214 aaPredicted RBP6.25□□□□□ -1.41
PWP1YLR196W CBF5P33322 483 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
PWP1YLR196W OPY1P38271 328 aa6.24□□□□□ -1.41
PWP1YLR196W NAB3P38996 802 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
PWP1YLR196W MTR4P47047 1073 aaKnown RBP6.24□□□□□ -1.41
PWP1YLR196W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
PWP1YLR196W MHP1P43638 1398 aa6.24□□□□□ -1.41
PWP1YLR196W YOR093CQ12275 1648 aa6.23□□□□□ -1.41
PWP1YLR196W RSC8P43609 557 aaKnown RBP6.23□□□□□ -1.41
PWP1YLR196W PRP3Q03338 469 aaPredicted RBP6.23□□□□□ -1.41
PWP1YLR196W YLL054CQ12244 843 aa6.23□□□□□ -1.41
PWP1YLR196W PDR12Q02785 1511 aa6.23□□□□□ -1.41
PWP1YLR196W SEC20P28791 383 aa6.22□□□□□ -1.41
PWP1YLR196W CDC27P38042 758 aa6.22□□□□□ -1.41
PWP1YLR196W CKB1P43639 278 aa6.22□□□□□ -1.41
PWP1YLR196W NOP7P53261 605 aaKnown RBP6.22□□□□□ -1.41
PWP1YLR196W CTR9P89105 1077 aa6.22□□□□□ -1.41
PWP1YLR196W IQG1Q12280 1495 aa6.21□□□□□ -1.42
PWP1YLR196W CFT1Q06632 1357 aaKnown RBP6.21□□□□□ -1.42
PWP1YLR196W PAF1P38351 445 aa6.21□□□□□ -1.42
PWP1YLR196W SSP1P38871 571 aa6.21□□□□□ -1.42
PWP1YLR196W AIM21P40563 679 aa6.21□□□□□ -1.42
PWP1YLR196W VID30P53076 958 aa6.21□□□□□ -1.42
PWP1YLR196W ALD3P54114 506 aa6.21□□□□□ -1.42
PWP1YLR196W SUP35P05453 685 aaKnown RBP6.2□□□□□ -1.42
PWP1YLR196W RPT2P40327 437 aaKnown RBP6.2□□□□□ -1.42
PWP1YLR196W AIM20P40451 204 aa6.2□□□□□ -1.42
PWP1YLR196W SMC3P47037 1230 aa6.2□□□□□ -1.42
PWP1YLR196W RRP15Q06511 250 aaPredicted RBP6.2□□□□□ -1.42
PWP1YLR196W YRF1-1P0CX20 1796 aa6.2□□□□□ -1.42
PWP1YLR196W YRF1-5P0CX21 1796 aa6.2□□□□□ -1.42
PWP1YLR196W YRF1-8P0CX22 1796 aa6.2□□□□□ -1.42
PWP1YLR196W RAD51P25454 400 aa6.19□□□□□ -1.42
PWP1YLR196W YGL015CP33199 130 aa6.19□□□□□ -1.42
PWP1YLR196W YJR008WP47085 338 aa6.19□□□□□ -1.42
PWP1YLR196W RCF1Q03713 159 aa6.19□□□□□ -1.42
PWP1YLR196W TFC8Q12308 588 aa6.19□□□□□ -1.42
PWP1YLR196W CHC1P22137 1653 aaKnown RBP6.18□□□□□ -1.42
PWP1YLR196W RAD26P40352 1085 aa6.18□□□□□ -1.42
PWP1YLR196W DJP1P40564 432 aa6.18□□□□□ -1.42
PWP1YLR196W YDR341CQ05506 607 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms