RNA–Protein interactions for RNA: YJR005W

APL1, Transcript of Beta-adaptin, yeastyeast

Gene APL1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APL1YJR005W TY1A-PR2P0CX60 440 aa3.15□□□□□ -1.91
APL1YJR005W TY1A-DR5P0CX65 440 aa3.15□□□□□ -1.91
APL1YJR005W TY1A-ER2P0CX66 440 aa3.15□□□□□ -1.91
APL1YJR005W TY1A-GR3P0CX67 440 aa3.15□□□□□ -1.91
APL1YJR005W TY1A-LR1P0CX68 440 aa3.15□□□□□ -1.91
APL1YJR005W TY1A-MR2P0CX69 440 aa3.15□□□□□ -1.91
APL1YJR005W SEC2P17065 759 aa3.15□□□□□ -1.91
APL1YJR005W TY1A-JR2P47099 440 aa3.15□□□□□ -1.91
APL1YJR005W TY1A-DR1Q03856 440 aa3.15□□□□□ -1.91
APL1YJR005W YDR444WQ04093 687 aa3.15□□□□□ -1.91
APL1YJR005W TY1A-ML1Q04706 440 aaKnown RBP3.15□□□□□ -1.91
APL1YJR005W YPR109WQ06104 294 aa3.15□□□□□ -1.91
APL1YJR005W TY1A-BRQ12217 440 aa3.15□□□□□ -1.91
APL1YJR005W TY1A-NL2Q12470 440 aa3.15□□□□□ -1.91
APL1YJR005W TY1A-GR2Q12485 440 aa3.15□□□□□ -1.91
APL1YJR005W IES2P40154 320 aa3.14□□□□□ -1.91
APL1YJR005W YDL176WQ12027 708 aa3.14□□□□□ -1.91
APL1YJR005W DSF2P38213 736 aa3.14□□□□□ -1.91
APL1YJR005W MAM3Q12296 706 aa3.14□□□□□ -1.91
APL1YJR005W NUP42P49686 430 aaKnown RBP3.13□□□□□ -1.91
APL1YJR005W ERF2Q06551 359 aa3.13□□□□□ -1.91
APL1YJR005W PRT1P06103 763 aaKnown RBP3.13□□□□□ -1.91
APL1YJR005W AIR1P40507 360 aaKnown RBP3.13□□□□□ -1.91
APL1YJR005W MRF1P30775 413 aaPredicted RBP3.12□□□□□ -1.91
APL1YJR005W NRD1P53617 575 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
APL1YJR005W KEX2P13134 814 aa3.11□□□□□ -1.91
APL1YJR005W DIT2P21595 489 aa3.11□□□□□ -1.91
APL1YJR005W SPB4P25808 606 aaPredicted RBP3.11□□□□□ -1.91
APL1YJR005W GCD11P32481 527 aaKnown RBP3.11□□□□□ -1.91
APL1YJR005W PSE1P32337 1089 aaKnown RBP3.11□□□□□ -1.91
APL1YJR005W NPL4P33755 580 aa3.11□□□□□ -1.91
APL1YJR005W CST6P40535 587 aa3.1□□□□□ -1.91
APL1YJR005W RRN7P40992 514 aa3.09□□□□□ -1.91
APL1YJR005W CLA4P48562 842 aa3.08□□□□□ -1.92
APL1YJR005W NIS1P53939 407 aa3.08□□□□□ -1.92
APL1YJR005W LCB5Q06147 687 aaKnown RBP3.07□□□□□ -1.92
APL1YJR005W SPT16P32558 1035 aaKnown RBP3.07□□□□□ -1.92
APL1YJR005W PAC1P39946 494 aaKnown RBP3.07□□□□□ -1.92
APL1YJR005W AGE1Q04412 482 aa3.07□□□□□ -1.92
APL1YJR005W ERG12P07277 443 aa3.06□□□□□ -1.92
APL1YJR005W TEA1P47988 759 aa3.06□□□□□ -1.92
APL1YJR005W FRK1Q03002 865 aaPredicted RBP3.06□□□□□ -1.92
APL1YJR005W LAM6Q08001 693 aa3.05□□□□□ -1.92
APL1YJR005W CLB5P30283 435 aa3.05□□□□□ -1.92
APL1YJR005W BDP1P46678 594 aa3.05□□□□□ -1.92
APL1YJR005W TUB4P53378 473 aa3.05□□□□□ -1.92
APL1YJR005W SIT4P20604 311 aa3.04□□□□□ -1.92
APL1YJR005W SCJ1P25303 377 aa3.04□□□□□ -1.92
APL1YJR005W TRK2P28584 889 aa3.04□□□□□ -1.92
APL1YJR005W GLC3P32775 704 aa3.04□□□□□ -1.92
APL1YJR005W FPK1P53739 893 aa3.04□□□□□ -1.92
APL1YJR005W CDC4P07834 779 aa3.03□□□□□ -1.92
APL1YJR005W LSB3P43603 459 aaKnown RBP3.03□□□□□ -1.92
APL1YJR005W YNL115CP53925 644 aa3.03□□□□□ -1.92
APL1YJR005W MOD5P07884 428 aa3.02□□□□□ -1.93
APL1YJR005W PUS5Q06244 254 aa3.02□□□□□ -1.93
APL1YJR005W SLY41P22215 453 aa3.01□□□□□ -1.93
APL1YJR005W PAT1P25644 796 aaKnown RBP3.01□□□□□ -1.93
APL1YJR005W RTF1P53064 558 aa3.01□□□□□ -1.93
APL1YJR005W YMR196WQ04336 1088 aa3.01□□□□□ -1.93
APL1YJR005W TYW1Q08960 810 aaKnown RBP3□□□□□ -1.93
APL1YJR005W ATF2P53296 535 aa2.99□□□□□ -1.93
APL1YJR005W YNR021WP53723 404 aaKnown RBP2.99□□□□□ -1.93
APL1YJR005W ESS1P22696 170 aa2.99□□□□□ -1.93
APL1YJR005W PDC1P06169 563 aaKnown RBP2.98□□□□□ -1.93
APL1YJR005W KTR1P27810 393 aaKnown RBP2.98□□□□□ -1.93
APL1YJR005W MET32Q12041 191 aa2.98□□□□□ -1.93
APL1YJR005W RQC2Q12532 1038 aaKnown RBP2.98□□□□□ -1.93
APL1YJR005W TRM1P15565 570 aaKnown RBP2.98□□□□□ -1.93
APL1YJR005W YJU3P28321 313 aa2.98□□□□□ -1.93
APL1YJR005W HST2P53686 357 aa2.98□□□□□ -1.93
APL1YJR005W YDL206WQ12424 762 aa2.98□□□□□ -1.93
APL1YJR005W HED1Q03937 162 aa2.97□□□□□ -1.93
APL1YJR005W PUS1Q12211 544 aaKnown RBP2.97□□□□□ -1.93
APL1YJR005W MMP1Q12372 583 aa2.97□□□□□ -1.93
APL1YJR005W ICP55P40051 511 aa2.96□□□□□ -1.93
APL1YJR005W RRD1P40454 393 aaKnown RBP2.96□□□□□ -1.93
APL1YJR005W HXT10P43581 546 aa2.96□□□□□ -1.93
APL1YJR005W GLN1P32288 370 aaKnown RBP2.96□□□□□ -1.94
APL1YJR005W KXD1P53158 218 aa2.95□□□□□ -1.94
APL1YJR005W PUS6P53294 404 aa2.95□□□□□ -1.94
APL1YJR005W YGR035CP53222 116 aa2.95□□□□□ -1.94
APL1YJR005W TBF1Q02457 562 aa2.95□□□□□ -1.94
APL1YJR005W TPD3P31383 635 aa2.94□□□□□ -1.94
APL1YJR005W ASH1P34233 588 aa2.94□□□□□ -1.94
APL1YJR005W RPA14P50106 137 aa2.94□□□□□ -1.94
APL1YJR005W ITT1Q04638 464 aa2.94□□□□□ -1.94
APL1YJR005W AIM7Q12156 149 aa2.94□□□□□ -1.94
APL1YJR005W RSC30P38781 883 aa2.93□□□□□ -1.94
APL1YJR005W PKH3Q03306 898 aaPredicted RBP2.93□□□□□ -1.94
APL1YJR005W YPR097WQ06839 1073 aa2.93□□□□□ -1.94
APL1YJR005W ALR1Q08269 859 aa2.93□□□□□ -1.94
APL1YJR005W BUB1P41695 1021 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
APL1YJR005W CSN12P47130 423 aa2.92□□□□□ -1.94
APL1YJR005W CAF120P53836 1060 aa2.92□□□□□ -1.94
APL1YJR005W AFT1P22149 690 aa2.92□□□□□ -1.94
APL1YJR005W SYH1Q02875 849 aaKnown RBP2.92□□□□□ -1.94
APL1YJR005W KIN1P13185 1064 aa2.91□□□□□ -1.94
APL1YJR005W ARG8P18544 423 aa2.91□□□□□ -1.94
APL1YJR005W KIP2P28743 706 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms