RNA–Protein interactions for RNA: YGR038C-B

YGR038C-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR038C-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR038C-BYGR038C-B SPT21P35209 758 aa3.15□□□□□ -1.91
YGR038C-BYGR038C-B ISW2Q08773 1120 aa3.15□□□□□ -1.91
YGR038C-BYGR038C-B YDR341CQ05506 607 aaKnown RBP3.14□□□□□ -1.91
YGR038C-BYGR038C-B GRX1P25373 110 aaKnown RBP3.14□□□□□ -1.91
YGR038C-BYGR038C-B DID4P36108 232 aa3.14□□□□□ -1.91
YGR038C-BYGR038C-B MSC7P38694 644 aa3.14□□□□□ -1.91
YGR038C-BYGR038C-B MSB4Q12317 492 aa3.14□□□□□ -1.91
YGR038C-BYGR038C-B NBL1Q3E7Y6 73 aa3.14□□□□□ -1.91
YGR038C-BYGR038C-B MON2P48563 1636 aaPredicted RBP3.14□□□□□ -1.91
YGR038C-BYGR038C-B GRX4P32642 244 aa3.14□□□□□ -1.91
YGR038C-BYGR038C-B ALT2P52892 507 aa3.14□□□□□ -1.91
YGR038C-BYGR038C-B PAN1P32521 1480 aa3.14□□□□□ -1.91
YGR038C-BYGR038C-B FAA3P39002 694 aa3.13□□□□□ -1.91
YGR038C-BYGR038C-B TPM2P40414 161 aa3.13□□□□□ -1.91
YGR038C-BYGR038C-B JIP4Q03361 876 aa3.13□□□□□ -1.91
YGR038C-BYGR038C-B RPN8Q08723 338 aaKnown RBP3.13□□□□□ -1.91
YGR038C-BYGR038C-B POL30P15873 258 aaKnown RBP3.13□□□□□ -1.91
YGR038C-BYGR038C-B YIL055CP40523 627 aaKnown RBP3.13□□□□□ -1.91
YGR038C-BYGR038C-B YGL081WP53156 320 aa3.13□□□□□ -1.91
YGR038C-BYGR038C-B UTP13Q05946 817 aaKnown RBP3.13□□□□□ -1.91
YGR038C-BYGR038C-B CTT1P06115 562 aa3.13□□□□□ -1.91
YGR038C-BYGR038C-B RMT2Q03305 412 aa3.13□□□□□ -1.91
YGR038C-BYGR038C-B YMR074CQ04773 145 aa3.13□□□□□ -1.91
YGR038C-BYGR038C-B CFT2Q12102 859 aaPredicted RBP3.13□□□□□ -1.91
YGR038C-BYGR038C-B RMD1Q03441 430 aa3.13□□□□□ -1.91
YGR038C-BYGR038C-B NUP157P40064 1391 aaKnown RBP3.12□□□□□ -1.91
YGR038C-BYGR038C-B XRN1P22147 1528 aaKnown RBP3.12□□□□□ -1.91
YGR038C-BYGR038C-B RAD9P14737 1309 aa3.12□□□□□ -1.91
YGR038C-BYGR038C-B VPS35P34110 944 aa3.12□□□□□ -1.91
YGR038C-BYGR038C-B STM1P39015 273 aaKnown RBP3.12□□□□□ -1.91
YGR038C-BYGR038C-B LYS14P40971 790 aa3.12□□□□□ -1.91
YGR038C-BYGR038C-B YAH1Q12184 172 aaKnown RBP3.12□□□□□ -1.91
YGR038C-BYGR038C-B MET5P47169 1442 aa3.12□□□□□ -1.91
YGR038C-BYGR038C-B SQS1P53866 767 aaKnown RBP3.12□□□□□ -1.91
YGR038C-BYGR038C-B YDL129WQ07555 291 aa3.12□□□□□ -1.91
YGR038C-BYGR038C-B TY1B-AO13527 1196 aaKnown RBP3.12□□□□□ -1.91
YGR038C-BYGR038C-B ENT1Q12518 454 aa3.12□□□□□ -1.91
YGR038C-BYGR038C-B SEC3P33332 1336 aaKnown RBP3.12□□□□□ -1.91
YGR038C-BYGR038C-B STU1P38198 1513 aa3.12□□□□□ -1.91
YGR038C-BYGR038C-B GLC3P32775 704 aa3.12□□□□□ -1.91
YGR038C-BYGR038C-B SAS3P34218 831 aa3.12□□□□□ -1.91
YGR038C-BYGR038C-B BDF1P35817 686 aa3.12□□□□□ -1.91
YGR038C-BYGR038C-B YKL133CP36066 463 aa3.12□□□□□ -1.91
YGR038C-BYGR038C-B VAB2P40003 282 aa3.12□□□□□ -1.91
YGR038C-BYGR038C-B SEM1O94742 89 aa3.11□□□□□ -1.91
YGR038C-BYGR038C-B HSP104P31539 908 aaKnown RBP3.11□□□□□ -1.91
YGR038C-BYGR038C-B LIF1P53150 421 aa3.11□□□□□ -1.91
YGR038C-BYGR038C-B TFC8Q12308 588 aa3.11□□□□□ -1.91
YGR038C-BYGR038C-B SPT2P06843 333 aaPredicted RBP3.11□□□□□ -1.91
YGR038C-BYGR038C-B YKR023WP36119 530 aaKnown RBP3.11□□□□□ -1.91
YGR038C-BYGR038C-B SSA1P10591 642 aaKnown RBP3.11□□□□□ -1.91
YGR038C-BYGR038C-B RPN1P38764 993 aaKnown RBP3.11□□□□□ -1.91
YGR038C-BYGR038C-B SLN1P39928 1220 aaPredicted RBP3.11□□□□□ -1.91
YGR038C-BYGR038C-B BUD27P43573 796 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
YGR038C-BYGR038C-B MTR4P47047 1073 aaKnown RBP3.11□□□□□ -1.91
YGR038C-BYGR038C-B ORC1P54784 914 aaPredicted RBP3.11□□□□□ -1.91
YGR038C-BYGR038C-B EIS1Q05050 843 aaKnown RBP3.11□□□□□ -1.91
YGR038C-BYGR038C-B THO2P53552 1597 aaKnown RBP3.11□□□□□ -1.91
YGR038C-BYGR038C-B SRC1Q03707 834 aa3.11□□□□□ -1.91
YGR038C-BYGR038C-B MRD1Q06106 887 aaKnown RBP3.11□□□□□ -1.91
YGR038C-BYGR038C-B SSP2Q08646 371 aa3.11□□□□□ -1.91
YGR038C-BYGR038C-B NUP159P40477 1460 aa3.1□□□□□ -1.91
YGR038C-BYGR038C-B YKL222CP35995 705 aa3.1□□□□□ -1.91
YGR038C-BYGR038C-B ITT1Q04638 464 aa3.1□□□□□ -1.91
YGR038C-BYGR038C-B TAF10Q12030 206 aa3.1□□□□□ -1.91
YGR038C-BYGR038C-B LEU2P04173 364 aaPredicted RBP3.1□□□□□ -1.91
YGR038C-BYGR038C-B YEL1P34225 687 aa3.1□□□□□ -1.91
YGR038C-BYGR038C-B TPS3P38426 1054 aaKnown RBP3.1□□□□□ -1.91
YGR038C-BYGR038C-B NMD3P38861 518 aaKnown RBP3.1□□□□□ -1.91
YGR038C-BYGR038C-B YFL040WP43562 540 aa3.1□□□□□ -1.91
YGR038C-BYGR038C-B JJJ1P53863 590 aa3.1□□□□□ -1.91
YGR038C-BYGR038C-B RAT1Q02792 1006 aaKnown RBP3.1□□□□□ -1.91
YGR038C-BYGR038C-B YOL036WQ08206 761 aa3.1□□□□□ -1.91
YGR038C-BYGR038C-B MMS22Q06164 1454 aa3.1□□□□□ -1.91
YGR038C-BYGR038C-B DPS1P04802 557 aaKnown RBP3.1□□□□□ -1.91
YGR038C-BYGR038C-B RAD2P07276 1031 aa3.1□□□□□ -1.91
YGR038C-BYGR038C-B SPE2P21182 396 aa3.1□□□□□ -1.91
YGR038C-BYGR038C-B SGM1P47166 707 aa3.1□□□□□ -1.91
YGR038C-BYGR038C-B DOS2P54858 310 aa3.09□□□□□ -1.91
YGR038C-BYGR038C-B TIF6Q12522 245 aaKnown RBP3.09□□□□□ -1.91
YGR038C-BYGR038C-B MMF1P40185 145 aaKnown RBP3.09□□□□□ -1.91
YGR038C-BYGR038C-B ALG2P43636 503 aa3.09□□□□□ -1.91
YGR038C-BYGR038C-B CTF4Q01454 927 aa3.09□□□□□ -1.91
YGR038C-BYGR038C-B TIM50Q02776 476 aa3.09□□□□□ -1.91
YGR038C-BYGR038C-B CWC15Q03772 175 aaKnown RBP3.09□□□□□ -1.91
YGR038C-BYGR038C-B YJU2P28320 278 aaPredicted RBP3.09□□□□□ -1.91
YGR038C-BYGR038C-B TFC4P33339 1025 aa3.09□□□□□ -1.91
YGR038C-BYGR038C-B PIP2P52960 996 aa3.09□□□□□ -1.91
YGR038C-BYGR038C-B STS1P38637 319 aa3.09□□□□□ -1.92
YGR038C-BYGR038C-B JJJ2P46997 583 aa3.09□□□□□ -1.92
YGR038C-BYGR038C-B YRB30P53107 440 aaPredicted RBP3.09□□□□□ -1.92
YGR038C-BYGR038C-B RRT6P53117 311 aaPredicted RBP3.09□□□□□ -1.92
YGR038C-BYGR038C-B RXT2P38255 430 aa3.08□□□□□ -1.92
YGR038C-BYGR038C-B THI12P42883 340 aa3.08□□□□□ -1.92
YGR038C-BYGR038C-B THI5P43534 340 aa3.08□□□□□ -1.92
YGR038C-BYGR038C-B THI11P47183 340 aa3.08□□□□□ -1.92
YGR038C-BYGR038C-B THI13Q07748 340 aa3.08□□□□□ -1.92
YGR038C-BYGR038C-B MYO2P19524 1574 aaKnown RBP3.08□□□□□ -1.92
YGR038C-BYGR038C-B RIM101P33400 625 aa3.08□□□□□ -1.92
YGR038C-BYGR038C-B APL2P36000 726 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms