RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C TFC8Q12308 588 aa5.79□□□□□ -1.48
SEC9YGR009C RRN6P32786 894 aa5.78□□□□□ -1.48
SEC9YGR009C SLD2P34252 453 aa5.78□□□□□ -1.48
SEC9YGR009C RRP14P36080 434 aaKnown RBP5.78□□□□□ -1.48
SEC9YGR009C MAP2P38174 421 aaKnown RBP5.78□□□□□ -1.48
SEC9YGR009C ERP4Q12450 207 aa5.78□□□□□ -1.48
SEC9YGR009C TY4B-PA0A0B7P3V8 1104 aa5.77□□□□□ -1.49
SEC9YGR009C PIM1P36775 1133 aa5.77□□□□□ -1.49
SEC9YGR009C HGH1P48362 394 aaKnown RBP5.77□□□□□ -1.49
SEC9YGR009C YLL054CQ12244 843 aa5.77□□□□□ -1.49
SEC9YGR009C NOP58Q12499 511 aaKnown RBP5.77□□□□□ -1.49
SEC9YGR009C TY4A-HQ6Q5P6 413 aa5.77□□□□□ -1.49
SEC9YGR009C DCD1P06773 312 aa5.76□□□□□ -1.49
SEC9YGR009C MUM2P38236 366 aa5.76□□□□□ -1.49
SEC9YGR009C NPR3P38742 1146 aa5.76□□□□□ -1.49
SEC9YGR009C ALD4P46367 519 aaKnown RBP5.76□□□□□ -1.49
SEC9YGR009C JIP5Q06214 492 aaPredicted RBP5.76□□□□□ -1.49
SEC9YGR009C HSP42Q12329 375 aa5.76□□□□□ -1.49
SEC9YGR009C AIM20P40451 204 aa5.76□□□□□ -1.49
SEC9YGR009C HEL2Q05580 639 aaKnown RBP5.76□□□□□ -1.49
SEC9YGR009C PUS1Q12211 544 aaKnown RBP5.76□□□□□ -1.49
SEC9YGR009C CBF5P33322 483 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
SEC9YGR009C SUB2Q07478 446 aaKnown RBP5.75□□□□□ -1.49
SEC9YGR009C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49 RIP-Chip
SEC9YGR009C VPS5Q92331 675 aa5.75□□□□□ -1.49
SEC9YGR009C KEX1P09620 729 aa5.75□□□□□ -1.49
SEC9YGR009C KIN1P13185 1064 aa5.75□□□□□ -1.49
SEC9YGR009C COG4Q06096 861 aa5.75□□□□□ -1.49
SEC9YGR009C SPB4P25808 606 aaPredicted RBP5.74□□□□□ -1.49
SEC9YGR009C SNU66Q12420 587 aaPredicted RBP5.74□□□□□ -1.49
SEC9YGR009C CTF4Q01454 927 aa5.73□□□□□ -1.49
SEC9YGR009C MSH4P40965 878 aaPredicted RBP5.73□□□□□ -1.49
SEC9YGR009C BNI5P53890 448 aaKnown RBP5.73□□□□□ -1.49
SEC9YGR009C SSF2Q12153 453 aaPredicted RBP5.73□□□□□ -1.49
SEC9YGR009C SUP35P05453 685 aaKnown RBP5.72□□□□□ -1.49
SEC9YGR009C HEM3P28789 327 aa5.72□□□□□ -1.49
SEC9YGR009C SAP190P36123 1033 aa5.72□□□□□ -1.49
SEC9YGR009C MAL31P38156 614 aa5.72□□□□□ -1.49
SEC9YGR009C PES4P39684 611 aa5.72□□□□□ -1.49
SEC9YGR009C MGA2P40578 1113 aa5.72□□□□□ -1.49
SEC9YGR009C ECM16Q04217 1267 aaKnown RBP5.72□□□□□ -1.49
SEC9YGR009C PPX1P38698 397 aa5.71□□□□□ -1.49
SEC9YGR009C CST6P40535 587 aa5.71□□□□□ -1.49
SEC9YGR009C BFA1P47113 574 aa5.71□□□□□ -1.49
SEC9YGR009C TAN1P53072 289 aaPredicted RBP5.71□□□□□ -1.49
SEC9YGR009C DNM1P54861 757 aa5.71□□□□□ -1.49
SEC9YGR009C RSC2Q06488 889 aa5.71□□□□□ -1.49
SEC9YGR009C YPR172WQ06608 200 aa5.71□□□□□ -1.49
SEC9YGR009C RIX7Q07844 837 aaKnown RBP5.71□□□□□ -1.49
SEC9YGR009C YOL057WQ08225 711 aa5.71□□□□□ -1.49
SEC9YGR009C CEX1Q12453 761 aa5.71□□□□□ -1.49
SEC9YGR009C NKP1Q12493 238 aa5.71□□□□□ -1.49
SEC9YGR009C DEP1P31385 405 aa5.71□□□□□ -1.5
SEC9YGR009C RIM101P33400 625 aa5.71□□□□□ -1.5
SEC9YGR009C LTV1P34078 463 aa5.71□□□□□ -1.5
SEC9YGR009C PRP43P53131 767 aaKnown RBP5.71□□□□□ -1.5
SEC9YGR009C YNL058CP53947 316 aa5.71□□□□□ -1.5
SEC9YGR009C PRP3Q03338 469 aaPredicted RBP5.71□□□□□ -1.5
SEC9YGR009C ENT2Q05785 613 aa5.71□□□□□ -1.5
SEC9YGR009C RPN7Q06103 429 aaKnown RBP5.71□□□□□ -1.5
SEC9YGR009C RPL5P26321 297 aaKnown RBP5.7□□□□□ -1.5
SEC9YGR009C VID30P53076 958 aa5.7□□□□□ -1.5
SEC9YGR009C SGT2Q12118 346 aaKnown RBP5.7□□□□□ -1.5
SEC9YGR009C TSR4P25040 408 aa5.69□□□□□ -1.5
SEC9YGR009C STE5P32917 917 aa5.69□□□□□ -1.5
SEC9YGR009C YMR124WP39523 943 aaKnown RBP5.69□□□□□ -1.5
SEC9YGR009C RSC8P43609 557 aaKnown RBP5.69□□□□□ -1.5
SEC9YGR009C RNH70P53331 553 aa5.69□□□□□ -1.5
SEC9YGR009C MDM1Q01846 1127 aa5.69□□□□□ -1.5
SEC9YGR009C KAR1P11927 433 aa5.69□□□□□ -1.5
SEC9YGR009C VTC3Q02725 835 aa5.69□□□□□ -1.5
SEC9YGR009C SSB1P11484 613 aaKnown RBP5.68□□□□□ -1.5
SEC9YGR009C HXT5P38695 592 aa5.68□□□□□ -1.5
SEC9YGR009C SSB2P40150 613 aaKnown RBP5.68□□□□□ -1.5
SEC9YGR009C NNF1P47149 201 aa5.68□□□□□ -1.5
SEC9YGR009C BNI4P53858 892 aa5.68□□□□□ -1.5
SEC9YGR009C RIA1P53893 1110 aa5.68□□□□□ -1.5
SEC9YGR009C GGA1Q06336 557 aa5.68□□□□□ -1.5
SEC9YGR009C APC5Q08683 685 aa5.68□□□□□ -1.5
SEC9YGR009C YHR218WP38899 603 aa5.67□□□□□ -1.5
SEC9YGR009C VHR2P40041 505 aa5.67□□□□□ -1.5
SEC9YGR009C MEP1P40260 492 aa5.67□□□□□ -1.5
SEC9YGR009C GPI8P49018 411 aa5.67□□□□□ -1.5
SEC9YGR009C SEN54Q02825 467 aaPredicted RBP5.67□□□□□ -1.5
SEC9YGR009C MSM1P22438 575 aa5.67□□□□□ -1.5
SEC9YGR009C BRF1P29056 596 aa5.67□□□□□ -1.5
SEC9YGR009C MRF1P30775 413 aaPredicted RBP5.67□□□□□ -1.5
SEC9YGR009C SWI3P32591 825 aa5.67□□□□□ -1.5
SEC9YGR009C PEX5P35056 612 aa5.67□□□□□ -1.5
SEC9YGR009C MET1P36150 593 aa5.67□□□□□ -1.5
SEC9YGR009C SVL3Q03088 825 aaKnown RBP5.67□□□□□ -1.5
SEC9YGR009C CDC45Q08032 650 aa5.67□□□□□ -1.5
SEC9YGR009C AVO1Q08236 1176 aa5.67□□□□□ -1.5
SEC9YGR009C CHD1P32657 1468 aa5.66□□□□□ -1.5
SEC9YGR009C IES2P40154 320 aa5.66□□□□□ -1.5
SEC9YGR009C ELA1P53861 379 aaPredicted RBP5.66□□□□□ -1.5
SEC9YGR009C SRP1Q02821 542 aaKnown RBP5.66□□□□□ -1.5
SEC9YGR009C SAC3P46674 1301 aa5.66□□□□□ -1.5
SEC9YGR009C MSH3P25336 1018 aa5.66□□□□□ -1.5
SEC9YGR009C PPH3P32345 308 aa5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms