RNA–Protein interactions for RNA: YGL079W

KXD1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene KXD1, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KXD1YGL079W TY1A-LR1P0CX68 440 aa8.59□□□□□ -1.03
KXD1YGL079W TY1A-MR2P0CX69 440 aa8.59□□□□□ -1.03
KXD1YGL079W TY1A-JR2P47099 440 aa8.59□□□□□ -1.03
KXD1YGL079W TY1A-DR1Q03856 440 aa8.59□□□□□ -1.03
KXD1YGL079W TY1A-ML1Q04706 440 aaKnown RBP8.59□□□□□ -1.03
KXD1YGL079W TY1A-BRQ12217 440 aa8.59□□□□□ -1.03
KXD1YGL079W TY1A-NL2Q12470 440 aa8.59□□□□□ -1.03
KXD1YGL079W TY1A-GR2Q12485 440 aa8.59□□□□□ -1.03
KXD1YGL079W SEC2P17065 759 aa8.58□□□□□ -1.04
KXD1YGL079W SDH2P21801 266 aa8.58□□□□□ -1.04
KXD1YGL079W TEA1P47988 759 aa8.58□□□□□ -1.04
KXD1YGL079W GCD11P32481 527 aaKnown RBP8.56□□□□□ -1.04
KXD1YGL079W YNR021WP53723 404 aaKnown RBP8.56□□□□□ -1.04
KXD1YGL079W KEX2P13134 814 aa8.54□□□□□ -1.04
KXD1YGL079W ERF2Q06551 359 aa8.54□□□□□ -1.04
KXD1YGL079W GLC3P32775 704 aa8.52□□□□□ -1.05
KXD1YGL079W NIS1P53939 407 aa8.52□□□□□ -1.05
KXD1YGL079W SIT4P20604 311 aa8.51□□□□□ -1.05
KXD1YGL079W LEU3P08638 886 aa8.5□□□□□ -1.05
KXD1YGL079W MRF1P30775 413 aaPredicted RBP8.5□□□□□ -1.05
KXD1YGL079W RAS1P01119 309 aa8.49□□□□□ -1.05
KXD1YGL079W ATF2P53296 535 aa8.49□□□□□ -1.05
KXD1YGL079W AMS1P22855 1083 aa8.48□□□□□ -1.05
KXD1YGL079W RTF1P53064 558 aa8.48□□□□□ -1.05
KXD1YGL079W RRN7P40992 514 aa8.46□□□□□ -1.06
KXD1YGL079W YEL077CQ3E7X8 1277 aa8.46□□□□□ -1.06
KXD1YGL079W SPT16P32558 1035 aaKnown RBP8.45□□□□□ -1.06
KXD1YGL079W FPK1P53739 893 aa8.45□□□□□ -1.06
KXD1YGL079W YNL115CP53925 644 aa8.45□□□□□ -1.06
KXD1YGL079W AIM7Q12156 149 aa8.44□□□□□ -1.06
KXD1YGL079W AGE1Q04412 482 aa8.43□□□□□ -1.06
KXD1YGL079W ERG12P07277 443 aa8.42□□□□□ -1.06
KXD1YGL079W PAT1P25644 796 aaKnown RBP8.42□□□□□ -1.06
KXD1YGL079W YMR196WQ04336 1088 aa8.42□□□□□ -1.06
KXD1YGL079W PAC1P39946 494 aaKnown RBP8.4□□□□□ -1.06
KXD1YGL079W TUB4P53378 473 aa8.4□□□□□ -1.06
KXD1YGL079W SRC1Q03707 834 aa8.4□□□□□ -1.06
KXD1YGL079W CST6P40535 587 aa8.39□□□□□ -1.07
KXD1YGL079W HST2P53686 357 aa8.39□□□□□ -1.07
KXD1YGL079W SLY41P22215 453 aa8.37□□□□□ -1.07
KXD1YGL079W LAM6Q08001 693 aa8.36□□□□□ -1.07
KXD1YGL079W SCJ1P25303 377 aa8.35□□□□□ -1.07
KXD1YGL079W GLN1P32288 370 aaKnown RBP8.33□□□□□ -1.08
KXD1YGL079W BDP1P46678 594 aa8.33□□□□□ -1.08
KXD1YGL079W MMP1Q12372 583 aa8.33□□□□□ -1.08
KXD1YGL079W MOD5P07884 428 aa8.32□□□□□ -1.08
KXD1YGL079W RPN1P38764 993 aaKnown RBP8.32□□□□□ -1.08
KXD1YGL079W FRK1Q03002 865 aaPredicted RBP8.32□□□□□ -1.08
KXD1YGL079W TYW1Q08960 810 aaKnown RBP8.31□□□□□ -1.08
KXD1YGL079W KIN1P13185 1064 aa8.3□□□□□ -1.08
KXD1YGL079W ESS1P22696 170 aa8.29□□□□□ -1.08
KXD1YGL079W KTR1P27810 393 aaKnown RBP8.29□□□□□ -1.08
KXD1YGL079W CLA4P48562 842 aa8.28□□□□□ -1.08
KXD1YGL079W PUS6P53294 404 aa8.28□□□□□ -1.08
KXD1YGL079W TRM1P15565 570 aaKnown RBP8.27□□□□□ -1.09
KXD1YGL079W CSN12P47130 423 aa8.26□□□□□ -1.09
KXD1YGL079W KXD1P53158 218 aa8.26□□□□□ -1.09
KXD1YGL079W PDC1P06169 563 aaKnown RBP8.25□□□□□ -1.09
KXD1YGL079W TRK1P12685 1235 aa8.25□□□□□ -1.09
KXD1YGL079W YJU3P28321 313 aa8.25□□□□□ -1.09
KXD1YGL079W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09not detected
KXD1YGL079W TBF1Q02457 562 aa8.25□□□□□ -1.09
KXD1YGL079W YDL206WQ12424 762 aa8.25□□□□□ -1.09
KXD1YGL079W TPD3P31383 635 aa8.24□□□□□ -1.09
KXD1YGL079W AIR1P40507 360 aaKnown RBP8.24□□□□□ -1.09
KXD1YGL079W HXT10P43581 546 aa8.23□□□□□ -1.09
KXD1YGL079W RPA14P50106 137 aa8.23□□□□□ -1.09
KXD1YGL079W RRD1P40454 393 aaKnown RBP8.22□□□□□ -1.09
KXD1YGL079W PKH3Q03306 898 aaPredicted RBP8.22□□□□□ -1.09
KXD1YGL079W HED1Q03937 162 aa8.21□□□□□ -1.1
KXD1YGL079W PUS5Q06244 254 aa8.21□□□□□ -1.1
KXD1YGL079W ALR1Q08269 859 aa8.21□□□□□ -1.1
KXD1YGL079W RSC30P38781 883 aa8.2□□□□□ -1.1
KXD1YGL079W YPR097WQ06839 1073 aa8.2□□□□□ -1.1
KXD1YGL079W CDC4P07834 779 aa8.17□□□□□ -1.1
KXD1YGL079W SSA2P10592 639 aaKnown RBP8.16□□□□□ -1.1
KXD1YGL079W GUA1P38625 525 aaKnown RBP8.15□□□□□ -1.1
KXD1YGL079W ARG8P18544 423 aa8.14□□□□□ -1.11
KXD1YGL079W RAD59Q12223 238 aa8.14□□□□□ -1.11
KXD1YGL079W MET32Q12041 191 aa8.13□□□□□ -1.11
KXD1YGL079W SYH1Q02875 849 aaKnown RBP8.11□□□□□ -1.11
KXD1YGL079W BRE2P43132 505 aa8.08□□□□□ -1.12
KXD1YGL079W KIP2P28743 706 aa8.06□□□□□ -1.12
KXD1YGL079W HPC2Q01448 625 aa8.06□□□□□ -1.12
KXD1YGL079W AFT1P22149 690 aa8.05□□□□□ -1.12
KXD1YGL079W VAC17P25591 423 aa8.05□□□□□ -1.12
KXD1YGL079W ASH1P34233 588 aa8.05□□□□□ -1.12
KXD1YGL079W IXR1P33417 597 aa8.04□□□□□ -1.12
KXD1YGL079W GCR2Q01722 534 aa8.03□□□□□ -1.12
KXD1YGL079W HST3P53687 447 aa8.02□□□□□ -1.13
KXD1YGL079W MAK16P10962 306 aaPredicted RBP8.01□□□□□ -1.13
KXD1YGL079W FIG4P42837 879 aa8.01□□□□□ -1.13
KXD1YGL079W MRT4P33201 236 aaKnown RBP7.99□□□□□ -1.13
KXD1YGL079W TFB3Q03290 321 aa7.99□□□□□ -1.13
KXD1YGL079W LEO1P38439 464 aa7.98□□□□□ -1.13
KXD1YGL079W BRL1P38770 471 aa7.97□□□□□ -1.13
KXD1YGL079W MSB3P48566 633 aaPredicted RBP7.97□□□□□ -1.13
KXD1YGL079W TEC1P18412 486 aa7.96□□□□□ -1.14
KXD1YGL079W CSE4P36012 229 aa7.96□□□□□ -1.14
KXD1YGL079W ITT1Q04638 464 aa7.96□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 76.2 ms