RNA–Protein interactions for RNA: YDR412W

RRP17, Transcript of Component of the pre-60S pre-ribosomal particle, yeastyeast

Gene RRP17, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP17YDR412W TY1A-NL2Q12470 440 aa9.66□□□□□ -0.86
RRP17YDR412W TY1A-GR2Q12485 440 aa9.66□□□□□ -0.86
RRP17YDR412W SDH2P21801 266 aa9.65□□□□□ -0.86
RRP17YDR412W ERF2Q06551 359 aa9.64□□□□□ -0.87
RRP17YDR412W SEC2P17065 759 aa9.61□□□□□ -0.87
RRP17YDR412W KEX2P13134 814 aa9.57□□□□□ -0.88
RRP17YDR412W GYP1Q08484 637 aa9.57□□□□□ -0.88
RRP17YDR412W GLC3P32775 704 aa9.56□□□□□ -0.88
RRP17YDR412W PRT1P06103 763 aaKnown RBP9.55□□□□□ -0.88
RRP17YDR412W GCD11P32481 527 aaKnown RBP9.53□□□□□ -0.88
RRP17YDR412W NIS1P53939 407 aa9.53□□□□□ -0.88
RRP17YDR412W RAS1P01119 309 aa9.52□□□□□ -0.89
RRP17YDR412W TEA1P47988 759 aa9.52□□□□□ -0.89
RRP17YDR412W YNR021WP53723 404 aaKnown RBP9.52□□□□□ -0.89
RRP17YDR412W DPS1P04802 557 aaKnown RBP9.51□□□□□ -0.89
RRP17YDR412W NPL4P33755 580 aa9.51□□□□□ -0.89
RRP17YDR412W CLB5P30283 435 aa9.49□□□□□ -0.89
RRP17YDR412W SIT4P20604 311 aa9.47□□□□□ -0.89
RRP17YDR412W SAS4Q04003 481 aa9.47□□□□□ -0.89
RRP17YDR412W LEU3P08638 886 aa9.45□□□□□ -0.9
RRP17YDR412W AGE1Q04412 482 aa9.45□□□□□ -0.9
RRP17YDR412W RRN7P40992 514 aa9.44□□□□□ -0.9
RRP17YDR412W FPK1P53739 893 aa9.44□□□□□ -0.9
RRP17YDR412W SCJ1P25303 377 aa9.43□□□□□ -0.9
RRP17YDR412W ATF2P53296 535 aa9.42□□□□□ -0.9
RRP17YDR412W SRC1Q03707 834 aa9.42□□□□□ -0.9
RRP17YDR412W PAC1P39946 494 aaKnown RBP9.41□□□□□ -0.9
RRP17YDR412W AMS1P22855 1083 aa9.4□□□□□ -0.9
RRP17YDR412W CST6P40535 587 aa9.4□□□□□ -0.9
RRP17YDR412W TUB4P53378 473 aa9.39□□□□□ -0.91
RRP17YDR412W YNL115CP53925 644 aa9.39□□□□□ -0.91
RRP17YDR412W KTR1P27810 393 aaKnown RBP9.36□□□□□ -0.91
RRP17YDR412W RTF1P53064 558 aa9.36□□□□□ -0.91
RRP17YDR412W TYW1Q08960 810 aaKnown RBP9.36□□□□□ -0.91
RRP17YDR412W SPT16P32558 1035 aaKnown RBP9.35□□□□□ -0.91
RRP17YDR412W AIM7Q12156 149 aa9.35□□□□□ -0.91
RRP17YDR412W CLA4P48562 842 aa9.33□□□□□ -0.92
RRP17YDR412W SLY41P22215 453 aa9.32□□□□□ -0.92
RRP17YDR412W HST2P53686 357 aa9.32□□□□□ -0.92
RRP17YDR412W YMR196WQ04336 1088 aa9.32□□□□□ -0.92
RRP17YDR412W LAM6Q08001 693 aa9.31□□□□□ -0.92
RRP17YDR412W ESS1P22696 170 aa9.3□□□□□ -0.92
RRP17YDR412W MRF1P30775 413 aaPredicted RBP9.3□□□□□ -0.92
RRP17YDR412W ERG12P07277 443 aa9.29□□□□□ -0.92
RRP17YDR412W MOD5P07884 428 aa9.29□□□□□ -0.92
RRP17YDR412W YJU3P28321 313 aa9.29□□□□□ -0.92
RRP17YDR412W YEL077CQ3E7X8 1277 aa9.29□□□□□ -0.92
RRP17YDR412W KIN1P13185 1064 aa9.28□□□□□ -0.92
RRP17YDR412W FRK1Q03002 865 aaPredicted RBP9.28□□□□□ -0.92
RRP17YDR412W MMP1Q12372 583 aa9.28□□□□□ -0.92
RRP17YDR412W BDP1P46678 594 aa9.27□□□□□ -0.93
RRP17YDR412W AIR1P40507 360 aaKnown RBP9.25□□□□□ -0.93
RRP17YDR412W GLN1P32288 370 aaKnown RBP9.24□□□□□ -0.93
RRP17YDR412W TRM1P15565 570 aaKnown RBP9.23□□□□□ -0.93
RRP17YDR412W RPN1P38764 993 aaKnown RBP9.23□□□□□ -0.93
RRP17YDR412W PAT1P25644 796 aaKnown RBP9.22□□□□□ -0.93
RRP17YDR412W PUS5Q06244 254 aa9.21□□□□□ -0.94
RRP17YDR412W PDC1P06169 563 aaKnown RBP9.2□□□□□ -0.94
RRP17YDR412W CSN12P47130 423 aa9.19□□□□□ -0.94
RRP17YDR412W YDL206WQ12424 762 aa9.19□□□□□ -0.94
RRP17YDR412W RSC30P38781 883 aa9.18□□□□□ -0.94
RRP17YDR412W PUS6P53294 404 aa9.18□□□□□ -0.94
RRP17YDR412W GUA1P38625 525 aaKnown RBP9.17□□□□□ -0.94
RRP17YDR412W PKH3Q03306 898 aaPredicted RBP9.17□□□□□ -0.94
RRP17YDR412W BUB1P41695 1021 aaKnown RBP RIP-Chip data9.13□□□□□ -0.95not detected
RRP17YDR412W HXT10P43581 546 aa9.13□□□□□ -0.95
RRP17YDR412W RRD1P40454 393 aaKnown RBP9.12□□□□□ -0.95
RRP17YDR412W RPA14P50106 137 aa9.12□□□□□ -0.95
RRP17YDR412W KXD1P53158 218 aa9.12□□□□□ -0.95
RRP17YDR412W TRK1P12685 1235 aa9.11□□□□□ -0.95
RRP17YDR412W TPD3P31383 635 aa9.11□□□□□ -0.95
RRP17YDR412W TBF1Q02457 562 aa9.11□□□□□ -0.95
RRP17YDR412W YPR097WQ06839 1073 aa9.11□□□□□ -0.95
RRP17YDR412W RAD59Q12223 238 aa9.09□□□□□ -0.95
RRP17YDR412W ARG8P18544 423 aa9.08□□□□□ -0.96
RRP17YDR412W MET32Q12041 191 aa9.07□□□□□ -0.96
RRP17YDR412W HED1Q03937 162 aa9.06□□□□□ -0.96
RRP17YDR412W ALR1Q08269 859 aa9.06□□□□□ -0.96
RRP17YDR412W ITT1Q04638 464 aa9.05□□□□□ -0.96
RRP17YDR412W CDC4P07834 779 aa9.02□□□□□ -0.97
RRP17YDR412W SSA2P10592 639 aaKnown RBP8.98□□□□□ -0.97
RRP17YDR412W PKC1P24583 1151 aa8.98□□□□□ -0.97
RRP17YDR412W TFB3Q03290 321 aa8.98□□□□□ -0.97
RRP17YDR412W VAC17P25591 423 aa8.95□□□□□ -0.98
RRP17YDR412W FIG4P42837 879 aa8.95□□□□□ -0.98
RRP17YDR412W HPC2Q01448 625 aa8.95□□□□□ -0.98
RRP17YDR412W ASH1P34233 588 aa8.94□□□□□ -0.98
RRP17YDR412W SYH1Q02875 849 aaKnown RBP8.94□□□□□ -0.98
RRP17YDR412W IXR1P33417 597 aa8.92□□□□□ -0.98
RRP17YDR412W BRE2P43132 505 aa8.92□□□□□ -0.98
RRP17YDR412W MAK16P10962 306 aaPredicted RBP8.91□□□□□ -0.98
RRP17YDR412W KIP2P28743 706 aa8.91□□□□□ -0.98
RRP17YDR412W YPR084WQ06821 456 aa8.9□□□□□ -0.98
RRP17YDR412W AFT1P22149 690 aa8.89□□□□□ -0.99
RRP17YDR412W LEO1P38439 464 aa8.87□□□□□ -0.99
RRP17YDR412W MRT4P33201 236 aaKnown RBP8.86□□□□□ -0.99
RRP17YDR412W APP1P53933 587 aa8.86□□□□□ -0.99
RRP17YDR412W BIO2P32451 375 aa8.85□□□□□ -0.99
RRP17YDR412W YDJ1P25491 409 aaKnown RBP8.83□□□□□ -1
RRP17YDR412W YJR115WP47152 169 aa8.83□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms