RNA–Protein interactions for RNA: YDR412W

RRP17, Transcript of Component of the pre-60S pre-ribosomal particle, yeastyeast

Gene RRP17, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP17YDR412W MTC1P47018 478 aaKnown RBP17.97■□□□□ 0.47
RRP17YDR412W DRS1P32892 752 aaKnown RBP17.24■□□□□ 0.35
RRP17YDR412W FAP1P53971 965 aa15.59■□□□□ 0.09
RRP17YDR412W DIP2Q12220 943 aaPredicted RBP14.94□□□□□ -0.02
RRP17YDR412W PRI1P10363 409 aa14.9□□□□□ -0.02
RRP17YDR412W AAD16Q02895 342 aa14.69□□□□□ -0.06
RRP17YDR412W PRY3P47033 881 aa14.68□□□□□ -0.06
RRP17YDR412W ISW2Q08773 1120 aa14.67□□□□□ -0.06
RRP17YDR412W RPG1P38249 964 aaKnown RBP14.63□□□□□ -0.07
RRP17YDR412W AVT3P36062 692 aa14.59□□□□□ -0.07
RRP17YDR412W BFR2Q06631 534 aaKnown RBP14.53□□□□□ -0.08
RRP17YDR412W RSE1Q04693 1361 aaKnown RBP14.27□□□□□ -0.12
RRP17YDR412W TSR3Q12094 313 aaKnown RBP14.16□□□□□ -0.14
RRP17YDR412W YCK3P39962 524 aa14.11□□□□□ -0.15
RRP17YDR412W RPL17AP05740 184 aaKnown RBP13.85□□□□□ -0.19
RRP17YDR412W RPL17BP46990 184 aaKnown RBP13.85□□□□□ -0.19
RRP17YDR412W HAA1Q12753 694 aaKnown RBP13.7□□□□□ -0.22
RRP17YDR412W REB1P21538 810 aa13.65□□□□□ -0.22
RRP17YDR412W MRPL32P25348 183 aa13.45□□□□□ -0.26
RRP17YDR412W SPT21P35209 758 aa13.36□□□□□ -0.27
RRP17YDR412W TFA1P36100 482 aa13.13□□□□□ -0.31
RRP17YDR412W YKR023WP36119 530 aaKnown RBP13.12□□□□□ -0.31
RRP17YDR412W CDC27P38042 758 aa13.05□□□□□ -0.32
RRP17YDR412W RIM101P33400 625 aa12.95□□□□□ -0.34
RRP17YDR412W HOP09932 586 aa12.84□□□□□ -0.35
RRP17YDR412W DCD1P06773 312 aa12.83□□□□□ -0.36
RRP17YDR412W TFC8Q12308 588 aa12.79□□□□□ -0.36
RRP17YDR412W YGL015CP33199 130 aa12.73□□□□□ -0.37
RRP17YDR412W OXP1P28273 1286 aa12.6□□□□□ -0.39
RRP17YDR412W MAP2P38174 421 aaKnown RBP12.54□□□□□ -0.4
RRP17YDR412W UBP10P53874 792 aaPredicted RBP12.43□□□□□ -0.42
RRP17YDR412W BCH2P36122 765 aa12.41□□□□□ -0.42
RRP17YDR412W SCY1P53009 804 aa12.35□□□□□ -0.43
RRP17YDR412W PTP3P40048 928 aa12.24□□□□□ -0.45
RRP17YDR412W YAH1Q12184 172 aaKnown RBP12.24□□□□□ -0.45
RRP17YDR412W YIL055CP40523 627 aaKnown RBP12.21□□□□□ -0.45
RRP17YDR412W EPS1P40557 701 aa12.12□□□□□ -0.47
RRP17YDR412W RSM7P47150 247 aa12.1□□□□□ -0.47
RRP17YDR412W SLX5P32828 619 aaKnown RBP12.08□□□□□ -0.48
RRP17YDR412W YLR271WQ06152 274 aa12.08□□□□□ -0.48
RRP17YDR412W BDF1P35817 686 aa12.06□□□□□ -0.48
RRP17YDR412W AI2P03876 854 aa11.99□□□□□ -0.49
RRP17YDR412W SSP1P38871 571 aa11.95□□□□□ -0.5
RRP17YDR412W TGL3P40308 642 aa11.84□□□□□ -0.51
RRP17YDR412W BBC1P47068 1157 aa11.84□□□□□ -0.51
RRP17YDR412W TIF4632P39936 914 aaKnown RBP11.83□□□□□ -0.52
RRP17YDR412W PSD2P53037 1138 aaKnown RBP11.83□□□□□ -0.52
RRP17YDR412W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.73□□□□□ -0.53not detected
RRP17YDR412W CST9Q06032 482 aa11.71□□□□□ -0.53
RRP17YDR412W MRM1P25270 412 aa11.6□□□□□ -0.55
RRP17YDR412W MGA2P40578 1113 aa11.58□□□□□ -0.56
RRP17YDR412W BUD31P25337 157 aaPredicted RBP11.53□□□□□ -0.56
RRP17YDR412W NSR1P27476 414 aaKnown RBP RIP-Chip data11.46□□□□□ -0.57 RIP-Chip
RRP17YDR412W MST1P07236 462 aa11.45□□□□□ -0.58
RRP17YDR412W RCR1P38212 213 aa11.43□□□□□ -0.58
RRP17YDR412W YOR238WQ08634 303 aa11.4□□□□□ -0.58
RRP17YDR412W YAP5P40574 245 aa11.39□□□□□ -0.59
RRP17YDR412W VPS29P38759 282 aa11.36□□□□□ -0.59
RRP17YDR412W PIB1Q06651 286 aa11.36□□□□□ -0.59
RRP17YDR412W RTG3P38165 486 aa11.29□□□□□ -0.6
RRP17YDR412W YBL029C-AQ3E756 94 aa11.25□□□□□ -0.61
RRP17YDR412W STS1P38637 319 aa11.24□□□□□ -0.61
RRP17YDR412W UBP9P39967 754 aa11.24□□□□□ -0.61
RRP17YDR412W YFR006WP43590 535 aa11.24□□□□□ -0.61
RRP17YDR412W YMR1P47147 688 aaKnown RBP RIP-Chip data11.21□□□□□ -0.61not detected
RRP17YDR412W DBP1P24784 617 aaKnown RBP11.19□□□□□ -0.62
RRP17YDR412W RAM2P29703 316 aa11.15□□□□□ -0.62
RRP17YDR412W WSC3Q12215 556 aa11.15□□□□□ -0.62
RRP17YDR412W VNX1P42839 908 aa11.11□□□□□ -0.63
RRP17YDR412W GTT3P39996 337 aa11.08□□□□□ -0.64
RRP17YDR412W VMA1P17255 1071 aaKnown RBP11.04□□□□□ -0.64
RRP17YDR412W SIS1P25294 352 aaKnown RBP10.97□□□□□ -0.65
RRP17YDR412W SPP1Q03012 353 aa10.97□□□□□ -0.65
RRP17YDR412W YOL036WQ08206 761 aa10.95□□□□□ -0.66
RRP17YDR412W MAK11P20484 414 aaKnown RBP10.94□□□□□ -0.66
RRP17YDR412W SET4P42948 560 aa10.93□□□□□ -0.66
RRP17YDR412W EDS1P38073 919 aa10.92□□□□□ -0.66
RRP17YDR412W TIF11P38912 153 aaKnown RBP10.92□□□□□ -0.66
RRP17YDR412W SAM3Q08986 587 aa10.92□□□□□ -0.66
RRP17YDR412W IOC2Q12072 812 aa10.85□□□□□ -0.67
RRP17YDR412W MIF2P35201 549 aa10.84□□□□□ -0.67
RRP17YDR412W ULI1P43604 169 aa10.84□□□□□ -0.67
RRP17YDR412W COQ8P27697 501 aa10.82□□□□□ -0.68
RRP17YDR412W MSB4Q12317 492 aa10.82□□□□□ -0.68
RRP17YDR412W TRP5P00931 707 aaKnown RBP10.78□□□□□ -0.68
RRP17YDR412W GYP5Q12344 894 aa10.78□□□□□ -0.68
RRP17YDR412W PTC3P34221 468 aaKnown RBP10.77□□□□□ -0.69
RRP17YDR412W LDB19Q12502 818 aa10.77□□□□□ -0.69
RRP17YDR412W FKH1P40466 484 aa10.74□□□□□ -0.69
RRP17YDR412W DCW1P36091 449 aa10.73□□□□□ -0.69
RRP17YDR412W AIR2Q12476 344 aaKnown RBP10.72□□□□□ -0.69
RRP17YDR412W EAP1P36041 632 aaKnown RBP10.7□□□□□ -0.7
RRP17YDR412W GRE2Q12068 342 aaKnown RBP10.67□□□□□ -0.7
RRP17YDR412W RTG1P32607 177 aa10.64□□□□□ -0.71
RRP17YDR412W HTA1P04911 132 aaKnown RBP10.62□□□□□ -0.71
RRP17YDR412W HTA2P04912 132 aa10.62□□□□□ -0.71
RRP17YDR412W SET1P38827 1080 aaKnown RBP10.62□□□□□ -0.71
RRP17YDR412W SOL3P38858 249 aa10.62□□□□□ -0.71
RRP17YDR412W DAN4P47179 1161 aa10.61□□□□□ -0.71
RRP17YDR412W NST1P53935 1240 aa10.61□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms