RNA–Protein interactions for RNA: YDR210C-D

YDR210C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR210C-D, Length 5,268 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR210C-D	YDR210C-D	SPT21	P35209	758 aa		3.15	□□□□□ -1.91
YDR210C-D	YDR210C-D	ISW2	Q08773	1120 aa		3.15	□□□□□ -1.91
YDR210C-D	YDR210C-D	YDR341C	Q05506	607 aa	Known RBP	3.14	□□□□□ -1.91
YDR210C-D	YDR210C-D	GRX1	P25373	110 aa	Known RBP	3.14	□□□□□ -1.91
YDR210C-D	YDR210C-D	DID4	P36108	232 aa		3.14	□□□□□ -1.91
YDR210C-D	YDR210C-D	MSC7	P38694	644 aa		3.14	□□□□□ -1.91
YDR210C-D	YDR210C-D	MSB4	Q12317	492 aa		3.14	□□□□□ -1.91
YDR210C-D	YDR210C-D	NBL1	Q3E7Y6	73 aa		3.14	□□□□□ -1.91
YDR210C-D	YDR210C-D	MON2	P48563	1636 aa	Predicted RBP	3.14	□□□□□ -1.91
YDR210C-D	YDR210C-D	GRX4	P32642	244 aa		3.14	□□□□□ -1.91
YDR210C-D	YDR210C-D	ALT2	P52892	507 aa		3.14	□□□□□ -1.91
YDR210C-D	YDR210C-D	PAN1	P32521	1480 aa		3.14	□□□□□ -1.91
YDR210C-D	YDR210C-D	FAA3	P39002	694 aa		3.13	□□□□□ -1.91
YDR210C-D	YDR210C-D	TPM2	P40414	161 aa		3.13	□□□□□ -1.91
YDR210C-D	YDR210C-D	JIP4	Q03361	876 aa		3.13	□□□□□ -1.91
YDR210C-D	YDR210C-D	RPN8	Q08723	338 aa	Known RBP	3.13	□□□□□ -1.91
YDR210C-D	YDR210C-D	POL30	P15873	258 aa	Known RBP	3.13	□□□□□ -1.91
YDR210C-D	YDR210C-D	YIL055C	P40523	627 aa	Known RBP	3.13	□□□□□ -1.91
YDR210C-D	YDR210C-D	YGL081W	P53156	320 aa		3.13	□□□□□ -1.91
YDR210C-D	YDR210C-D	UTP13	Q05946	817 aa	Known RBP	3.13	□□□□□ -1.91
YDR210C-D	YDR210C-D	CTT1	P06115	562 aa		3.13	□□□□□ -1.91
YDR210C-D	YDR210C-D	RMT2	Q03305	412 aa		3.13	□□□□□ -1.91
YDR210C-D	YDR210C-D	YMR074C	Q04773	145 aa		3.13	□□□□□ -1.91
YDR210C-D	YDR210C-D	CFT2	Q12102	859 aa	Predicted RBP	3.13	□□□□□ -1.91
YDR210C-D	YDR210C-D	RMD1	Q03441	430 aa		3.13	□□□□□ -1.91
YDR210C-D	YDR210C-D	NUP157	P40064	1391 aa	Known RBP	3.12	□□□□□ -1.91
YDR210C-D	YDR210C-D	XRN1	P22147	1528 aa	Known RBP	3.12	□□□□□ -1.91
YDR210C-D	YDR210C-D	RAD9	P14737	1309 aa		3.12	□□□□□ -1.91
YDR210C-D	YDR210C-D	VPS35	P34110	944 aa		3.12	□□□□□ -1.91
YDR210C-D	YDR210C-D	STM1	P39015	273 aa	Known RBP	3.12	□□□□□ -1.91
YDR210C-D	YDR210C-D	LYS14	P40971	790 aa		3.12	□□□□□ -1.91
YDR210C-D	YDR210C-D	YAH1	Q12184	172 aa	Known RBP	3.12	□□□□□ -1.91
YDR210C-D	YDR210C-D	MET5	P47169	1442 aa		3.12	□□□□□ -1.91
YDR210C-D	YDR210C-D	SQS1	P53866	767 aa	Known RBP	3.12	□□□□□ -1.91
YDR210C-D	YDR210C-D	YDL129W	Q07555	291 aa		3.12	□□□□□ -1.91
YDR210C-D	YDR210C-D	TY1B-A	O13527	1196 aa	Known RBP	3.12	□□□□□ -1.91
YDR210C-D	YDR210C-D	ENT1	Q12518	454 aa		3.12	□□□□□ -1.91
YDR210C-D	YDR210C-D	SEC3	P33332	1336 aa	Known RBP	3.12	□□□□□ -1.91
YDR210C-D	YDR210C-D	STU1	P38198	1513 aa		3.12	□□□□□ -1.91
YDR210C-D	YDR210C-D	GLC3	P32775	704 aa		3.12	□□□□□ -1.91
YDR210C-D	YDR210C-D	SAS3	P34218	831 aa		3.12	□□□□□ -1.91
YDR210C-D	YDR210C-D	BDF1	P35817	686 aa		3.12	□□□□□ -1.91
YDR210C-D	YDR210C-D	YKL133C	P36066	463 aa		3.12	□□□□□ -1.91
YDR210C-D	YDR210C-D	VAB2	P40003	282 aa		3.12	□□□□□ -1.91
YDR210C-D	YDR210C-D	SEM1	O94742	89 aa		3.11	□□□□□ -1.91
YDR210C-D	YDR210C-D	HSP104	P31539	908 aa	Known RBP	3.11	□□□□□ -1.91
YDR210C-D	YDR210C-D	LIF1	P53150	421 aa		3.11	□□□□□ -1.91
YDR210C-D	YDR210C-D	TFC8	Q12308	588 aa		3.11	□□□□□ -1.91
YDR210C-D	YDR210C-D	SPT2	P06843	333 aa	Predicted RBP	3.11	□□□□□ -1.91
YDR210C-D	YDR210C-D	YKR023W	P36119	530 aa	Known RBP	3.11	□□□□□ -1.91
YDR210C-D	YDR210C-D	SSA1	P10591	642 aa	Known RBP	3.11	□□□□□ -1.91
YDR210C-D	YDR210C-D	RPN1	P38764	993 aa	Known RBP	3.11	□□□□□ -1.91
YDR210C-D	YDR210C-D	SLN1	P39928	1220 aa	Predicted RBP	3.11	□□□□□ -1.91
YDR210C-D	YDR210C-D	BUD27	P43573	796 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
YDR210C-D	YDR210C-D	MTR4	P47047	1073 aa	Known RBP	3.11	□□□□□ -1.91
YDR210C-D	YDR210C-D	ORC1	P54784	914 aa	Predicted RBP	3.11	□□□□□ -1.91
YDR210C-D	YDR210C-D	EIS1	Q05050	843 aa	Known RBP	3.11	□□□□□ -1.91
YDR210C-D	YDR210C-D	THO2	P53552	1597 aa	Known RBP	3.11	□□□□□ -1.91
YDR210C-D	YDR210C-D	SRC1	Q03707	834 aa		3.11	□□□□□ -1.91
YDR210C-D	YDR210C-D	MRD1	Q06106	887 aa	Known RBP	3.11	□□□□□ -1.91
YDR210C-D	YDR210C-D	SSP2	Q08646	371 aa		3.11	□□□□□ -1.91
YDR210C-D	YDR210C-D	NUP159	P40477	1460 aa		3.1	□□□□□ -1.91
YDR210C-D	YDR210C-D	YKL222C	P35995	705 aa		3.1	□□□□□ -1.91
YDR210C-D	YDR210C-D	ITT1	Q04638	464 aa		3.1	□□□□□ -1.91
YDR210C-D	YDR210C-D	TAF10	Q12030	206 aa		3.1	□□□□□ -1.91
YDR210C-D	YDR210C-D	LEU2	P04173	364 aa	Predicted RBP	3.1	□□□□□ -1.91
YDR210C-D	YDR210C-D	YEL1	P34225	687 aa		3.1	□□□□□ -1.91
YDR210C-D	YDR210C-D	TPS3	P38426	1054 aa	Known RBP	3.1	□□□□□ -1.91
YDR210C-D	YDR210C-D	NMD3	P38861	518 aa	Known RBP	3.1	□□□□□ -1.91
YDR210C-D	YDR210C-D	YFL040W	P43562	540 aa		3.1	□□□□□ -1.91
YDR210C-D	YDR210C-D	JJJ1	P53863	590 aa		3.1	□□□□□ -1.91
YDR210C-D	YDR210C-D	RAT1	Q02792	1006 aa	Known RBP	3.1	□□□□□ -1.91
YDR210C-D	YDR210C-D	YOL036W	Q08206	761 aa		3.1	□□□□□ -1.91
YDR210C-D	YDR210C-D	MMS22	Q06164	1454 aa		3.1	□□□□□ -1.91
YDR210C-D	YDR210C-D	DPS1	P04802	557 aa	Known RBP	3.1	□□□□□ -1.91
YDR210C-D	YDR210C-D	RAD2	P07276	1031 aa		3.1	□□□□□ -1.91
YDR210C-D	YDR210C-D	SPE2	P21182	396 aa		3.1	□□□□□ -1.91
YDR210C-D	YDR210C-D	SGM1	P47166	707 aa		3.1	□□□□□ -1.91
YDR210C-D	YDR210C-D	DOS2	P54858	310 aa		3.09	□□□□□ -1.91
YDR210C-D	YDR210C-D	TIF6	Q12522	245 aa	Known RBP	3.09	□□□□□ -1.91
YDR210C-D	YDR210C-D	MMF1	P40185	145 aa	Known RBP	3.09	□□□□□ -1.91
YDR210C-D	YDR210C-D	ALG2	P43636	503 aa		3.09	□□□□□ -1.91
YDR210C-D	YDR210C-D	CTF4	Q01454	927 aa		3.09	□□□□□ -1.91
YDR210C-D	YDR210C-D	TIM50	Q02776	476 aa		3.09	□□□□□ -1.91
YDR210C-D	YDR210C-D	CWC15	Q03772	175 aa	Known RBP	3.09	□□□□□ -1.91
YDR210C-D	YDR210C-D	YJU2	P28320	278 aa	Predicted RBP	3.09	□□□□□ -1.91
YDR210C-D	YDR210C-D	TFC4	P33339	1025 aa		3.09	□□□□□ -1.91
YDR210C-D	YDR210C-D	PIP2	P52960	996 aa		3.09	□□□□□ -1.91
YDR210C-D	YDR210C-D	STS1	P38637	319 aa		3.09	□□□□□ -1.92
YDR210C-D	YDR210C-D	JJJ2	P46997	583 aa		3.09	□□□□□ -1.92
YDR210C-D	YDR210C-D	YRB30	P53107	440 aa	Predicted RBP	3.09	□□□□□ -1.92
YDR210C-D	YDR210C-D	RRT6	P53117	311 aa	Predicted RBP	3.09	□□□□□ -1.92
YDR210C-D	YDR210C-D	RXT2	P38255	430 aa		3.08	□□□□□ -1.92
YDR210C-D	YDR210C-D	THI12	P42883	340 aa		3.08	□□□□□ -1.92
YDR210C-D	YDR210C-D	THI5	P43534	340 aa		3.08	□□□□□ -1.92
YDR210C-D	YDR210C-D	THI11	P47183	340 aa		3.08	□□□□□ -1.92
YDR210C-D	YDR210C-D	THI13	Q07748	340 aa		3.08	□□□□□ -1.92
YDR210C-D	YDR210C-D	MYO2	P19524	1574 aa	Known RBP	3.08	□□□□□ -1.92
YDR210C-D	YDR210C-D	RIM101	P33400	625 aa		3.08	□□□□□ -1.92
YDR210C-D	YDR210C-D	APL2	P36000	726 aa	Predicted RBP	3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 388.1 ms