RNA–Protein interactions for RNA: YDL007W

RPT2, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT2, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT2YDL007W RPN1P38764 993 aaKnown RBP7.68□□□□□ -1.18
RPT2YDL007W IES2P40154 320 aa7.67□□□□□ -1.18
RPT2YDL007W CSC1Q06538 782 aa7.67□□□□□ -1.18
RPT2YDL007W MPC54Q08550 464 aa7.67□□□□□ -1.18
RPT2YDL007W TRM732Q03496 1420 aa7.66□□□□□ -1.18
RPT2YDL007W ARH1P48360 493 aa7.66□□□□□ -1.18
RPT2YDL007W PEX21P50091 288 aa7.66□□□□□ -1.18
RPT2YDL007W NTE1Q04958 1679 aa7.65□□□□□ -1.18
RPT2YDL007W SIN3P22579 1536 aa7.65□□□□□ -1.18
RPT2YDL007W ELP4Q02884 456 aaKnown RBP7.65□□□□□ -1.18
RPT2YDL007W ISU2Q12056 156 aa7.65□□□□□ -1.18
RPT2YDL007W CHL1P22516 861 aaPredicted RBP7.64□□□□□ -1.19
RPT2YDL007W PSE1P32337 1089 aaKnown RBP7.64□□□□□ -1.19
RPT2YDL007W HAP5Q02516 242 aa7.64□□□□□ -1.19
RPT2YDL007W PRE3P38624 215 aa7.63□□□□□ -1.19
RPT2YDL007W DMA2P53924 522 aa7.63□□□□□ -1.19
RPT2YDL007W TFB4Q12004 338 aa7.63□□□□□ -1.19
RPT2YDL007W YNR021WP53723 404 aaKnown RBP7.62□□□□□ -1.19
RPT2YDL007W NMA111P53920 997 aa7.62□□□□□ -1.19
RPT2YDL007W SCC2Q04002 1493 aa7.62□□□□□ -1.19
RPT2YDL007W ORC6P38826 435 aa7.61□□□□□ -1.19
RPT2YDL007W CDC73Q06697 393 aa7.61□□□□□ -1.19
RPT2YDL007W TY1B-BRQ12193 1756 aa7.61□□□□□ -1.19
RPT2YDL007W TY1B-GR3Q12316 1755 aa7.61□□□□□ -1.19
RPT2YDL007W TY1B-ORQ92393 1755 aa7.61□□□□□ -1.19
RPT2YDL007W CLB5P30283 435 aa7.6□□□□□ -1.19
RPT2YDL007W SPT23P35210 1082 aa7.6□□□□□ -1.19
RPT2YDL007W NUP42P49686 430 aaKnown RBP7.6□□□□□ -1.19
RPT2YDL007W GAP1P19145 602 aaPredicted RBP7.58□□□□□ -1.2
RPT2YDL007W BNI4P53858 892 aa7.58□□□□□ -1.2
RPT2YDL007W YRF1-1P0CX20 1796 aa7.58□□□□□ -1.2
RPT2YDL007W YRF1-5P0CX21 1796 aa7.58□□□□□ -1.2
RPT2YDL007W YRF1-8P0CX22 1796 aa7.58□□□□□ -1.2
RPT2YDL007W MMS22Q06164 1454 aa7.58□□□□□ -1.2
RPT2YDL007W NUP159P40477 1460 aa7.57□□□□□ -1.2
RPT2YDL007W PTC2P39966 464 aaKnown RBP7.55□□□□□ -1.2
RPT2YDL007W MVP1P40959 511 aaKnown RBP7.55□□□□□ -1.2
RPT2YDL007W ATF2P53296 535 aa7.55□□□□□ -1.2
RPT2YDL007W RGR1P19263 1082 aa7.54□□□□□ -1.2
RPT2YDL007W DIT2P21595 489 aa7.54□□□□□ -1.2
RPT2YDL007W AIM7Q12156 149 aa7.54□□□□□ -1.2
RPT2YDL007W NUP170P38181 1502 aa7.54□□□□□ -1.2
RPT2YDL007W TUM1Q08686 304 aaKnown RBP7.52□□□□□ -1.2
RPT2YDL007W TEA1P47988 759 aa7.52□□□□□ -1.21
RPT2YDL007W TY2B-LR1P0C2J3 1770 aa7.51□□□□□ -1.21
RPT2YDL007W TY2B-FP0CX63 1770 aa7.51□□□□□ -1.21
RPT2YDL007W TY2B-GR2P0CX64 1770 aa7.51□□□□□ -1.21
RPT2YDL007W TY2B-CP25384 1770 aa7.51□□□□□ -1.21
RPT2YDL007W TY2B-DR2Q03494 1770 aa7.51□□□□□ -1.21
RPT2YDL007W TY1B-DR1Q03855 1755 aa7.51□□□□□ -1.21
RPT2YDL007W TY2B-DR3Q07791 1770 aaKnown RBP7.51□□□□□ -1.21
RPT2YDL007W TY2B-OR1Q12113 1770 aa7.51□□□□□ -1.21
RPT2YDL007W TY2B-DR1Q12472 1770 aa7.51□□□□□ -1.21
RPT2YDL007W TY2B-OR2Q12501 1770 aa7.51□□□□□ -1.21
RPT2YDL007W YML082WQ04533 649 aaKnown RBP7.5□□□□□ -1.21
RPT2YDL007W YPR109WQ06104 294 aa7.5□□□□□ -1.21
RPT2YDL007W YRR1Q12172 810 aa7.5□□□□□ -1.21
RPT2YDL007W NPL4P33755 580 aa7.49□□□□□ -1.21
RPT2YDL007W PDR15Q04182 1529 aaKnown RBP7.48□□□□□ -1.21
RPT2YDL007W GLC3P32775 704 aa7.48□□□□□ -1.21
RPT2YDL007W GLN1P32288 370 aaKnown RBP7.45□□□□□ -1.22
RPT2YDL007W BCK2P33306 851 aa7.45□□□□□ -1.22
RPT2YDL007W YDR344CQ05510 147 aa7.45□□□□□ -1.22
RPT2YDL007W TY1B-HO13535 1793 aa7.44□□□□□ -1.22
RPT2YDL007W TY1B-DR5P0C2I2 1755 aa7.44□□□□□ -1.22
RPT2YDL007W TY1B-DR6P0C2I3 1755 aa7.44□□□□□ -1.22
RPT2YDL007W TY1B-LR2P0C2I5 1755 aa7.44□□□□□ -1.22
RPT2YDL007W TY1B-LR3P0C2I6 1755 aaKnown RBP7.44□□□□□ -1.22
RPT2YDL007W TY1B-PR1P0C2I9 1755 aaKnown RBP7.44□□□□□ -1.22
RPT2YDL007W TY1B-PR2P0C2J0 1756 aa7.44□□□□□ -1.22
RPT2YDL007W TY1B-PR3P0C2J1 1755 aaKnown RBP7.44□□□□□ -1.22
RPT2YDL007W TY1B-JR1P47098 1755 aa7.44□□□□□ -1.22
RPT2YDL007W TY1B-ML2Q03434 1755 aaKnown RBP7.44□□□□□ -1.22
RPT2YDL007W TY1B-ER1Q03612 1755 aa7.44□□□□□ -1.22
RPT2YDL007W TY1B-ML1Q04711 1755 aaKnown RBP7.44□□□□□ -1.22
RPT2YDL007W TY1B-GR2Q12269 1755 aa7.44□□□□□ -1.22
RPT2YDL007W TY1B-OLQ12273 1755 aa7.44□□□□□ -1.22
RPT2YDL007W TY1B-PLQ12414 1755 aaKnown RBP7.44□□□□□ -1.22
RPT2YDL007W DOP1Q03921 1698 aa7.43□□□□□ -1.22
RPT2YDL007W NUD1P32336 851 aa7.42□□□□□ -1.22
RPT2YDL007W KIN1P13185 1064 aa7.41□□□□□ -1.22
RPT2YDL007W VRP1P37370 817 aa7.41□□□□□ -1.22
RPT2YDL007W SAS4Q04003 481 aa7.4□□□□□ -1.22
RPT2YDL007W YMR196WQ04336 1088 aa7.4□□□□□ -1.22
RPT2YDL007W PDR1P12383 1068 aa7.39□□□□□ -1.23
RPT2YDL007W RRD1P40454 393 aaKnown RBP7.39□□□□□ -1.23
RPT2YDL007W RTF1P53064 558 aa7.39□□□□□ -1.23
RPT2YDL007W TY2B-BQ12491 1770 aa7.38□□□□□ -1.23
RPT2YDL007W RAM1P22007 431 aa7.38□□□□□ -1.23
RPT2YDL007W TOP2P06786 1428 aaKnown RBP7.38□□□□□ -1.23
RPT2YDL007W TRM3Q07527 1436 aa7.37□□□□□ -1.23
RPT2YDL007W GYP1Q08484 637 aa7.36□□□□□ -1.23
RPT2YDL007W SPO14P36126 1683 aa7.35□□□□□ -1.23
RPT2YDL007W PAT1P25644 796 aaKnown RBP7.35□□□□□ -1.23
RPT2YDL007W XDJ1P39102 459 aa7.35□□□□□ -1.23
RPT2YDL007W PRT1P06103 763 aaKnown RBP7.34□□□□□ -1.23
RPT2YDL007W SSA2P10592 639 aaKnown RBP7.34□□□□□ -1.23
RPT2YDL007W SIT4P20604 311 aa7.34□□□□□ -1.23
RPT2YDL007W NIS1P53939 407 aa7.34□□□□□ -1.23
RPT2YDL007W MRF1P30775 413 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms