RNA–Protein interactions for RNA: YCR021C

HSP30, Transcript of Negative regulator of the H(+)-ATPase Pma1p, yeastyeast

Gene HSP30, Length 999 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP30YCR021C YRF1-1P0CX20 1796 aa6.21□□□□□ -1.42
HSP30YCR021C YRF1-5P0CX21 1796 aa6.21□□□□□ -1.42
HSP30YCR021C YRF1-8P0CX22 1796 aa6.21□□□□□ -1.42
HSP30YCR021C EDS1P38073 919 aa6.2□□□□□ -1.42
HSP30YCR021C GRE2Q12068 342 aaKnown RBP6.2□□□□□ -1.42
HSP30YCR021C RPO21P04050 1733 aaKnown RBP6.19□□□□□ -1.42
HSP30YCR021C JIP4Q03361 876 aa6.19□□□□□ -1.42
HSP30YCR021C COQ8P27697 501 aa6.18□□□□□ -1.42
HSP30YCR021C PTC3P34221 468 aaKnown RBP6.18□□□□□ -1.42
HSP30YCR021C DAN4P47179 1161 aa6.18□□□□□ -1.42
HSP30YCR021C VPS15P22219 1454 aa6.17□□□□□ -1.42
HSP30YCR021C YEL023CP39992 682 aa6.17□□□□□ -1.42
HSP30YCR021C TFG1P41895 735 aaPredicted RBP6.17□□□□□ -1.42
HSP30YCR021C PTC4P38089 393 aa6.16□□□□□ -1.42
HSP30YCR021C RTT106P40161 455 aa6.16□□□□□ -1.42
HSP30YCR021C ATH1P48016 1211 aa6.16□□□□□ -1.42
HSP30YCR021C MLP2P40457 1679 aa6.16□□□□□ -1.42
HSP30YCR021C TY3B-GQ99315 1547 aa6.15□□□□□ -1.42
HSP30YCR021C GEA1P47102 1408 aaPredicted RBP6.15□□□□□ -1.43
HSP30YCR021C ITT1Q04638 464 aa6.14□□□□□ -1.43
HSP30YCR021C LTE1P07866 1435 aa6.14□□□□□ -1.43
HSP30YCR021C SPO14P36126 1683 aa6.14□□□□□ -1.43
HSP30YCR021C GUT1P32190 709 aa6.13□□□□□ -1.43
HSP30YCR021C IRC20Q06554 1556 aa6.13□□□□□ -1.43
HSP30YCR021C SAP30P38429 201 aa6.12□□□□□ -1.43
HSP30YCR021C GEA2P39993 1459 aaKnown RBP6.12□□□□□ -1.43
HSP30YCR021C NUP157P40064 1391 aaKnown RBP6.11□□□□□ -1.43
HSP30YCR021C MET10P39692 1035 aa6.11□□□□□ -1.43
HSP30YCR021C NOP53Q12080 455 aaKnown RBP6.11□□□□□ -1.43
HSP30YCR021C GDB1Q06625 1536 aa6.1□□□□□ -1.43
HSP30YCR021C BNI1P41832 1953 aa6.09□□□□□ -1.43
HSP30YCR021C TAF7Q05021 590 aa6.09□□□□□ -1.43
HSP30YCR021C YDL129WQ07555 291 aa6.09□□□□□ -1.43
HSP30YCR021C PDR12Q02785 1511 aa6.08□□□□□ -1.44
HSP30YCR021C PDR10P51533 1564 aa6.07□□□□□ -1.44
HSP30YCR021C SOL3P38858 249 aa6.07□□□□□ -1.44
HSP30YCR021C NST1P53935 1240 aa6.07□□□□□ -1.44
HSP30YCR021C PML39Q03760 334 aa6.06□□□□□ -1.44
HSP30YCR021C BUD3P25558 1636 aa6.06□□□□□ -1.44
HSP30YCR021C DRS2P39524 1355 aa6.05□□□□□ -1.44
HSP30YCR021C CKB1P43639 278 aa6.04□□□□□ -1.44
HSP30YCR021C NUP170P38181 1502 aa6.04□□□□□ -1.44
HSP30YCR021C YBT1P32386 1661 aa6.04□□□□□ -1.44
HSP30YCR021C IQG1Q12280 1495 aa6.03□□□□□ -1.44
HSP30YCR021C SSM4P40318 1319 aa6.03□□□□□ -1.44
HSP30YCR021C MMS1Q06211 1407 aa6.03□□□□□ -1.44
HSP30YCR021C ARO1P08566 1588 aaKnown RBP6.02□□□□□ -1.45
HSP30YCR021C SET1P38827 1080 aaKnown RBP6.02□□□□□ -1.45
HSP30YCR021C MID1P41821 548 aa6.01□□□□□ -1.45
HSP30YCR021C CAT8P39113 1433 aa6□□□□□ -1.45
HSP30YCR021C YSP2Q06681 1438 aa6□□□□□ -1.45
HSP30YCR021C MPH3P0CE00 602 aa6□□□□□ -1.45
HSP30YCR021C YGR273CP53329 174 aa6□□□□□ -1.45
HSP30YCR021C AI4P03878 556 aa5.99□□□□□ -1.45
HSP30YCR021C CHL1P22516 861 aaPredicted RBP5.99□□□□□ -1.45
HSP30YCR021C PRE3P38624 215 aa5.99□□□□□ -1.45
HSP30YCR021C YDR344CQ05510 147 aa5.99□□□□□ -1.45
HSP30YCR021C DOP1Q03921 1698 aa5.98□□□□□ -1.45
HSP30YCR021C IKI3Q06706 1349 aaKnown RBP5.98□□□□□ -1.45
HSP30YCR021C ILV3P39522 585 aaKnown RBP5.97□□□□□ -1.45
HSP30YCR021C ELP4Q02884 456 aaKnown RBP5.96□□□□□ -1.46
HSP30YCR021C SRB8P25648 1427 aa5.93□□□□□ -1.46
HSP30YCR021C PEX29Q03370 554 aa5.93□□□□□ -1.46
HSP30YCR021C BNR1P40450 1375 aa5.93□□□□□ -1.46
HSP30YCR021C BCK2P33306 851 aa5.91□□□□□ -1.46
HSP30YCR021C ARH1P48360 493 aa5.91□□□□□ -1.46
HSP30YCR021C TRM3Q07527 1436 aa5.91□□□□□ -1.46
HSP30YCR021C DNF2Q12675 1612 aa5.9□□□□□ -1.46
HSP30YCR021C SLI15P38283 698 aa5.89□□□□□ -1.47
HSP30YCR021C KEX1P09620 729 aa5.88□□□□□ -1.47
HSP30YCR021C VRP1P37370 817 aa5.88□□□□□ -1.47
HSP30YCR021C VHR2P40041 505 aa5.88□□□□□ -1.47
HSP30YCR021C BUD21Q08492 214 aaPredicted RBP5.88□□□□□ -1.47
HSP30YCR021C UBP14P38237 781 aaKnown RBP5.87□□□□□ -1.47
HSP30YCR021C MPC54Q08550 464 aa5.87□□□□□ -1.47
HSP30YCR021C CHC1P22137 1653 aaKnown RBP5.87□□□□□ -1.47
HSP30YCR021C NMA111P53920 997 aa5.85□□□□□ -1.47
HSP30YCR021C HAP5Q02516 242 aa5.85□□□□□ -1.47
HSP30YCR021C YLR326WQ06170 240 aaKnown RBP5.85□□□□□ -1.47
HSP30YCR021C SPT23P35210 1082 aa5.84□□□□□ -1.47
HSP30YCR021C YOR093CQ12275 1648 aa5.84□□□□□ -1.47
HSP30YCR021C PDR11P40550 1411 aa5.83□□□□□ -1.48
HSP30YCR021C TYS1P36421 394 aaKnown RBP5.83□□□□□ -1.48
HSP30YCR021C DPL1Q05567 589 aa5.83□□□□□ -1.48
HSP30YCR021C VMR1P38735 1592 aa5.83□□□□□ -1.48
HSP30YCR021C PCS60P38137 543 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
HSP30YCR021C CDC73Q06697 393 aa5.82□□□□□ -1.48
HSP30YCR021C SEC7P11075 2009 aaKnown RBP5.82□□□□□ -1.48
HSP30YCR021C PDR5P33302 1511 aaKnown RBP5.81□□□□□ -1.48
HSP30YCR021C XDJ1P39102 459 aa5.81□□□□□ -1.48
HSP30YCR021C BNI4P53858 892 aa5.81□□□□□ -1.48
HSP30YCR021C YPR148CQ06523 435 aa5.81□□□□□ -1.48
HSP30YCR021C RAD54P32863 898 aa5.8□□□□□ -1.48
HSP30YCR021C VPS70P47161 811 aa5.8□□□□□ -1.48
HSP30YCR021C YML082WQ04533 649 aaKnown RBP5.79□□□□□ -1.48
HSP30YCR021C PTC2P39966 464 aaKnown RBP5.78□□□□□ -1.48
HSP30YCR021C YAP3P38749 330 aa5.77□□□□□ -1.49
HSP30YCR021C DMA1P38823 416 aa5.77□□□□□ -1.49
HSP30YCR021C REF2P42073 533 aaPredicted RBP5.77□□□□□ -1.49
HSP30YCR021C YDR090CQ03193 310 aa5.77□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms