RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeastyeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHC1YBR235W MCM2P29469 868 aa5.4□□□□□ -1.54
VHC1YBR235W MDM38Q08179 573 aa5.4□□□□□ -1.54
VHC1YBR235W ALD3P54114 506 aa5.4□□□□□ -1.55
VHC1YBR235W TEA1P47988 759 aa5.39□□□□□ -1.55
VHC1YBR235W RNT1Q02555 471 aa5.39□□□□□ -1.55
VHC1YBR235W NFI1Q12216 726 aa5.39□□□□□ -1.55
VHC1YBR235W DAL5P15365 543 aa5.39□□□□□ -1.55
VHC1YBR235W ISW1P38144 1129 aa5.39□□□□□ -1.55
VHC1YBR235W RRP15Q06511 250 aaPredicted RBP5.39□□□□□ -1.55
VHC1YBR235W HOS3Q02959 697 aaKnown RBP5.39□□□□□ -1.55
VHC1YBR235W HOT1Q03213 719 aa5.39□□□□□ -1.55
VHC1YBR235W PUS1Q12211 544 aaKnown RBP5.39□□□□□ -1.55
VHC1YBR235W TAF2P23255 1407 aa5.38□□□□□ -1.55
VHC1YBR235W SPT16P32558 1035 aaKnown RBP5.38□□□□□ -1.55
VHC1YBR235W VPS27P40343 622 aaKnown RBP5.38□□□□□ -1.55
VHC1YBR235W ESC2Q06340 456 aa5.38□□□□□ -1.55
VHC1YBR235W RVB2Q12464 471 aaKnown RBP5.38□□□□□ -1.55
VHC1YBR235W ABP1P15891 592 aaKnown RBP5.38□□□□□ -1.55
VHC1YBR235W ZUO1P32527 433 aaKnown RBP5.37□□□□□ -1.55
VHC1YBR235W NUF2P33895 451 aa5.37□□□□□ -1.55
VHC1YBR235W SFI1Q12369 946 aa5.37□□□□□ -1.55
VHC1YBR235W YPK9Q12697 1472 aa5.37□□□□□ -1.55
VHC1YBR235W MFT1P33441 392 aaKnown RBP5.37□□□□□ -1.55
VHC1YBR235W YGL081WP53156 320 aa5.37□□□□□ -1.55
VHC1YBR235W SWI3P32591 825 aa5.36□□□□□ -1.55
VHC1YBR235W PEX19Q07418 342 aa5.36□□□□□ -1.55
VHC1YBR235W MYO2P19524 1574 aaKnown RBP5.36□□□□□ -1.55
VHC1YBR235W PDS5Q04264 1277 aa5.36□□□□□ -1.55
VHC1YBR235W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
VHC1YBR235W VPS5Q92331 675 aa5.36□□□□□ -1.55
VHC1YBR235W PIM1P36775 1133 aa5.36□□□□□ -1.55
VHC1YBR235W YNL035CP53962 389 aaKnown RBP5.36□□□□□ -1.55
VHC1YBR235W LCD1Q04377 747 aa5.36□□□□□ -1.55
VHC1YBR235W PSR1Q07800 427 aa5.36□□□□□ -1.55
VHC1YBR235W SMC4Q12267 1418 aa5.35□□□□□ -1.55
VHC1YBR235W TAF13P11747 167 aa5.35□□□□□ -1.55
VHC1YBR235W TCD1P38756 429 aa5.35□□□□□ -1.55
VHC1YBR235W VID30P53076 958 aa5.35□□□□□ -1.55
VHC1YBR235W DNM1P54861 757 aa5.35□□□□□ -1.55
VHC1YBR235W TIM11P81449 96 aaPredicted RBP5.35□□□□□ -1.55
VHC1YBR235W VPS72Q03388 795 aa5.35□□□□□ -1.55
VHC1YBR235W DPH5P32469 300 aaPredicted RBP5.35□□□□□ -1.55
VHC1YBR235W TPS3P38426 1054 aaKnown RBP5.35□□□□□ -1.55
VHC1YBR235W YVC1Q12324 675 aa5.35□□□□□ -1.55
VHC1YBR235W VPS30Q02948 557 aa5.35□□□□□ -1.55
VHC1YBR235W CEF1Q03654 590 aaPredicted RBP5.35□□□□□ -1.55
VHC1YBR235W GCD6P32501 712 aaKnown RBP5.34□□□□□ -1.55
VHC1YBR235W OLA1P38219 394 aaKnown RBP5.34□□□□□ -1.55
VHC1YBR235W SML1Q04964 104 aa5.34□□□□□ -1.55
VHC1YBR235W YOL087CQ99247 1116 aa5.34□□□□□ -1.55
VHC1YBR235W ORM2Q06144 216 aa5.34□□□□□ -1.55
VHC1YBR235W NDL1Q06568 189 aa5.34□□□□□ -1.55
VHC1YBR235W SWR1Q05471 1514 aa5.33□□□□□ -1.56
VHC1YBR235W ATG36P46983 293 aa5.33□□□□□ -1.56
VHC1YBR235W TPO2P53283 614 aa5.33□□□□□ -1.56
VHC1YBR235W THO2P53552 1597 aaKnown RBP5.33□□□□□ -1.56
VHC1YBR235W PSO2P30620 661 aa5.33□□□□□ -1.56
VHC1YBR235W SIN3P22579 1536 aa5.33□□□□□ -1.56
VHC1YBR235W TRM3Q07527 1436 aa5.33□□□□□ -1.56
VHC1YBR235W PET111P08468 800 aa5.33□□□□□ -1.56
VHC1YBR235W RTT107P38850 1070 aa5.33□□□□□ -1.56
VHC1YBR235W NOP7P53261 605 aaKnown RBP5.32□□□□□ -1.56
VHC1YBR235W RAD3P06839 778 aa5.32□□□□□ -1.56
VHC1YBR235W HUL5P53119 910 aa5.32□□□□□ -1.56
VHC1YBR235W PXR1P53335 271 aaPredicted RBP5.32□□□□□ -1.56
VHC1YBR235W TLG2Q08144 397 aa5.32□□□□□ -1.56
VHC1YBR235W SEC39Q12745 709 aa5.32□□□□□ -1.56
VHC1YBR235W VPS41P38959 992 aa5.32□□□□□ -1.56
VHC1YBR235W BEM4P39011 633 aa5.32□□□□□ -1.56
VHC1YBR235W MPP10P47083 593 aaKnown RBP5.32□□□□□ -1.56
VHC1YBR235W GGA1Q06336 557 aa5.32□□□□□ -1.56
VHC1YBR235W IMH1Q06704 911 aaKnown RBP5.32□□□□□ -1.56
VHC1YBR235W CDC11P32458 415 aa5.31□□□□□ -1.56
VHC1YBR235W TOM71P38825 639 aaKnown RBP5.31□□□□□ -1.56
VHC1YBR235W YMR124WP39523 943 aaKnown RBP5.31□□□□□ -1.56
VHC1YBR235W SEC26P41810 973 aaKnown RBP5.31□□□□□ -1.56
VHC1YBR235W SPR3P41901 512 aa5.31□□□□□ -1.56
VHC1YBR235W MNR2P35724 969 aa5.31□□□□□ -1.56
VHC1YBR235W MRS2Q01926 470 aa5.31□□□□□ -1.56
VHC1YBR235W RRP9Q06506 573 aaKnown RBP5.31□□□□□ -1.56
VHC1YBR235W AOS1Q06624 347 aa5.31□□□□□ -1.56
VHC1YBR235W YOR389WQ08912 624 aa5.31□□□□□ -1.56
VHC1YBR235W TFG1P41895 735 aaPredicted RBP5.3□□□□□ -1.56
VHC1YBR235W RCF1Q03713 159 aa5.3□□□□□ -1.56
VHC1YBR235W NUP145P49687 1317 aa5.3□□□□□ -1.56
VHC1YBR235W TY4B-PA0A0B7P3V8 1104 aa5.3□□□□□ -1.56
VHC1YBR235W KAR3P17119 729 aa5.3□□□□□ -1.56
VHC1YBR235W MIC60P36112 540 aa5.3□□□□□ -1.56
VHC1YBR235W RKM3P38222 552 aa5.3□□□□□ -1.56
VHC1YBR235W ARO80Q04052 950 aa5.3□□□□□ -1.56
VHC1YBR235W VMS1Q04311 632 aaKnown RBP5.3□□□□□ -1.56
VHC1YBR235W YDL144CQ07589 356 aa5.3□□□□□ -1.56
VHC1YBR235W CFT2Q12102 859 aaPredicted RBP5.3□□□□□ -1.56
VHC1YBR235W CHZ1P40019 153 aaPredicted RBP5.3□□□□□ -1.56
VHC1YBR235W PRP31P49704 494 aaPredicted RBP5.3□□□□□ -1.56
VHC1YBR235W ARR1Q06596 294 aa5.3□□□□□ -1.56
VHC1YBR235W WHI5Q12416 295 aa5.3□□□□□ -1.56
VHC1YBR235W KEX2P13134 814 aa5.29□□□□□ -1.56
VHC1YBR235W RIX7Q07844 837 aaKnown RBP5.29□□□□□ -1.56
VHC1YBR235W UBP1P25037 809 aa5.29□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms