RNA–Protein interactions for RNA: YBR194W

AIM4, Transcript of Protein proposed to be associated with the nuclear pore complex, yeast

Gene AIM4, Length 372 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AIM4	YBR194W	TY1A-DR1	Q03856	440 aa		6.13	□□□□□ -1.43
AIM4	YBR194W	TY1A-ML1	Q04706	440 aa	Known RBP	6.13	□□□□□ -1.43
AIM4	YBR194W	TY1A-BR	Q12217	440 aa		6.13	□□□□□ -1.43
AIM4	YBR194W	TY1A-NL2	Q12470	440 aa		6.13	□□□□□ -1.43
AIM4	YBR194W	TY1A-GR2	Q12485	440 aa		6.13	□□□□□ -1.43
AIM4	YBR194W	PRT1	P06103	763 aa	Known RBP	6.12	□□□□□ -1.43
AIM4	YBR194W	SEC2	P17065	759 aa		6.12	□□□□□ -1.43
AIM4	YBR194W	SDH2	P21801	266 aa		6.12	□□□□□ -1.43
AIM4	YBR194W	SIT4	P20604	311 aa		6.11	□□□□□ -1.43
AIM4	YBR194W	LEU3	P08638	886 aa		6.1	□□□□□ -1.43
AIM4	YBR194W	GYP1	Q08484	637 aa		6.1	□□□□□ -1.43
AIM4	YBR194W	TEA1	P47988	759 aa		6.09	□□□□□ -1.43
AIM4	YBR194W	ERF2	Q06551	359 aa		6.09	□□□□□ -1.43
AIM4	YBR194W	NPL4	P33755	580 aa		6.08	□□□□□ -1.44
AIM4	YBR194W	GCD11	P32481	527 aa	Known RBP	6.07	□□□□□ -1.44
AIM4	YBR194W	NIS1	P53939	407 aa		6.07	□□□□□ -1.44
AIM4	YBR194W	DPS1	P04802	557 aa	Known RBP	6.06	□□□□□ -1.44
AIM4	YBR194W	KEX2	P13134	814 aa		6.06	□□□□□ -1.44
AIM4	YBR194W	RTF1	P53064	558 aa		6.06	□□□□□ -1.44
AIM4	YBR194W	GLC3	P32775	704 aa		6.05	□□□□□ -1.44
AIM4	YBR194W	AIM7	Q12156	149 aa		6.05	□□□□□ -1.44
AIM4	YBR194W	RAS1	P01119	309 aa		6.04	□□□□□ -1.44
AIM4	YBR194W	YNL115C	P53925	644 aa		6.03	□□□□□ -1.44
AIM4	YBR194W	AGE1	Q04412	482 aa		6.03	□□□□□ -1.44
AIM4	YBR194W	AMS1	P22855	1083 aa		6.02	□□□□□ -1.45
AIM4	YBR194W	MRF1	P30775	413 aa	Predicted RBP	6.02	□□□□□ -1.45
AIM4	YBR194W	ATF2	P53296	535 aa		6.02	□□□□□ -1.45
AIM4	YBR194W	FPK1	P53739	893 aa		6.02	□□□□□ -1.45
AIM4	YBR194W	HST2	P53686	357 aa		6	□□□□□ -1.45
AIM4	YBR194W	RRN7	P40992	514 aa		5.99	□□□□□ -1.45
AIM4	YBR194W	TUB4	P53378	473 aa		5.98	□□□□□ -1.45
AIM4	YBR194W	SRC1	Q03707	834 aa		5.98	□□□□□ -1.45
AIM4	YBR194W	YEL077C	Q3E7X8	1277 aa		5.98	□□□□□ -1.45
AIM4	YBR194W	MOD5	P07884	428 aa		5.97	□□□□□ -1.45
AIM4	YBR194W	SPT16	P32558	1035 aa	Known RBP	5.97	□□□□□ -1.45
AIM4	YBR194W	PAC1	P39946	494 aa	Known RBP	5.97	□□□□□ -1.45
AIM4	YBR194W	RPN1	P38764	993 aa	Known RBP	5.96	□□□□□ -1.46
AIM4	YBR194W	CST6	P40535	587 aa		5.96	□□□□□ -1.46
AIM4	YBR194W	ERG12	P07277	443 aa		5.95	□□□□□ -1.46
AIM4	YBR194W	SCJ1	P25303	377 aa		5.95	□□□□□ -1.46
AIM4	YBR194W	PAT1	P25644	796 aa	Known RBP	5.95	□□□□□ -1.46
AIM4	YBR194W	YMR196W	Q04336	1088 aa		5.95	□□□□□ -1.46
AIM4	YBR194W	LAM6	Q08001	693 aa		5.95	□□□□□ -1.46
AIM4	YBR194W	KTR1	P27810	393 aa	Known RBP	5.94	□□□□□ -1.46
AIM4	YBR194W	KIN1	P13185	1064 aa		5.93	□□□□□ -1.46
AIM4	YBR194W	SLY41	P22215	453 aa		5.93	□□□□□ -1.46
AIM4	YBR194W	MMP1	Q12372	583 aa		5.93	□□□□□ -1.46
AIM4	YBR194W	GLN1	P32288	370 aa	Known RBP	5.92	□□□□□ -1.46
AIM4	YBR194W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.92	□□□□□ -1.46	not detected
AIM4	YBR194W	TPD3	P31383	635 aa		5.91	□□□□□ -1.46
AIM4	YBR194W	BDP1	P46678	594 aa		5.91	□□□□□ -1.46
AIM4	YBR194W	PUS6	P53294	404 aa		5.91	□□□□□ -1.46
AIM4	YBR194W	RSC30	P38781	883 aa		5.9	□□□□□ -1.46
AIM4	YBR194W	TYW1	Q08960	810 aa	Known RBP	5.9	□□□□□ -1.46
AIM4	YBR194W	ESS1	P22696	170 aa		5.89	□□□□□ -1.47
AIM4	YBR194W	CSN12	P47130	423 aa		5.89	□□□□□ -1.47
AIM4	YBR194W	YJU3	P28321	313 aa		5.88	□□□□□ -1.47
AIM4	YBR194W	CLA4	P48562	842 aa		5.88	□□□□□ -1.47
AIM4	YBR194W	PDC1	P06169	563 aa	Known RBP	5.87	□□□□□ -1.47
AIM4	YBR194W	TRM1	P15565	570 aa	Known RBP	5.87	□□□□□ -1.47
AIM4	YBR194W	RPA14	P50106	137 aa		5.87	□□□□□ -1.47
AIM4	YBR194W	YPR097W	Q06839	1073 aa		5.87	□□□□□ -1.47
AIM4	YBR194W	HXT10	P43581	546 aa		5.86	□□□□□ -1.47
AIM4	YBR194W	KXD1	P53158	218 aa		5.86	□□□□□ -1.47
AIM4	YBR194W	FRK1	Q03002	865 aa	Predicted RBP	5.86	□□□□□ -1.47
AIM4	YBR194W	HED1	Q03937	162 aa		5.85	□□□□□ -1.47
AIM4	YBR194W	TRK1	P12685	1235 aa		5.84	□□□□□ -1.47
AIM4	YBR194W	RRD1	P40454	393 aa	Known RBP	5.84	□□□□□ -1.47
AIM4	YBR194W	AIR1	P40507	360 aa	Known RBP	5.84	□□□□□ -1.47
AIM4	YBR194W	YDL206W	Q12424	762 aa		5.84	□□□□□ -1.47
AIM4	YBR194W	GUA1	P38625	525 aa	Known RBP	5.83	□□□□□ -1.48
AIM4	YBR194W	TBF1	Q02457	562 aa		5.82	□□□□□ -1.48
AIM4	YBR194W	PKH3	Q03306	898 aa	Predicted RBP	5.82	□□□□□ -1.48
AIM4	YBR194W	ALR1	Q08269	859 aa		5.82	□□□□□ -1.48
AIM4	YBR194W	CDC4	P07834	779 aa		5.81	□□□□□ -1.48
AIM4	YBR194W	SSA2	P10592	639 aa	Known RBP	5.81	□□□□□ -1.48
AIM4	YBR194W	PUS5	Q06244	254 aa		5.81	□□□□□ -1.48
AIM4	YBR194W	RAD59	Q12223	238 aa		5.8	□□□□□ -1.48
AIM4	YBR194W	HPC2	Q01448	625 aa		5.79	□□□□□ -1.48
AIM4	YBR194W	RGA2	Q06407	1009 aa		5.78	□□□□□ -1.48
AIM4	YBR194W	MET32	Q12041	191 aa		5.78	□□□□□ -1.48
AIM4	YBR194W	ARG8	P18544	423 aa		5.77	□□□□□ -1.49
AIM4	YBR194W	LEO1	P38439	464 aa		5.76	□□□□□ -1.49
AIM4	YBR194W	VAC17	P25591	423 aa		5.75	□□□□□ -1.49
AIM4	YBR194W	SYH1	Q02875	849 aa	Known RBP	5.75	□□□□□ -1.49
AIM4	YBR194W	MAK16	P10962	306 aa	Predicted RBP	5.73	□□□□□ -1.49
AIM4	YBR194W	AFT1	P22149	690 aa		5.73	□□□□□ -1.49
AIM4	YBR194W	MRT4	P33201	236 aa	Known RBP	5.73	□□□□□ -1.49
AIM4	YBR194W	ASH1	P34233	588 aa		5.72	□□□□□ -1.49
AIM4	YBR194W	FIG4	P42837	879 aa		5.72	□□□□□ -1.49
AIM4	YBR194W	CSE4	P36012	229 aa		5.71	□□□□□ -1.5
AIM4	YBR194W	BRE2	P43132	505 aa		5.71	□□□□□ -1.5
AIM4	YBR194W	YPR084W	Q06821	456 aa		5.71	□□□□□ -1.5
AIM4	YBR194W	IXR1	P33417	597 aa		5.7	□□□□□ -1.5
AIM4	YBR194W	TFB3	Q03290	321 aa		5.7	□□□□□ -1.5
AIM4	YBR194W	KIP2	P28743	706 aa		5.69	□□□□□ -1.5
AIM4	YBR194W	NAF1	P53919	492 aa	Known RBP	5.68	□□□□□ -1.5
AIM4	YBR194W	PKC1	P24583	1151 aa		5.67	□□□□□ -1.5
AIM4	YBR194W	RGA1	P39083	1007 aa		5.67	□□□□□ -1.5
AIM4	YBR194W	MSB3	P48566	633 aa	Predicted RBP	5.67	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms