RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C LAM6Q08001 693 aa7.39□□□□□ -1.23
NPL4YBR170C REF2P42073 533 aaPredicted RBP7.38□□□□□ -1.23
NPL4YBR170C CLA4P48562 842 aa7.38□□□□□ -1.23
NPL4YBR170C FRK1Q03002 865 aaPredicted RBP7.36□□□□□ -1.23
NPL4YBR170C CDC4P07834 779 aa7.35□□□□□ -1.23
NPL4YBR170C PAT1P25644 796 aaKnown RBP7.35□□□□□ -1.23
NPL4YBR170C ORC6P38826 435 aa7.34□□□□□ -1.23
NPL4YBR170C TY1A-DR4O74302 440 aa7.33□□□□□ -1.24
NPL4YBR170C TY1A-HP0C2I4 478 aaKnown RBP7.33□□□□□ -1.24
NPL4YBR170C TY1A-AP0CX57 440 aa7.33□□□□□ -1.24
NPL4YBR170C TY1A-PR1P0CX58 440 aa7.33□□□□□ -1.24
NPL4YBR170C TY1A-ORP0CX59 440 aa7.33□□□□□ -1.24
NPL4YBR170C TY1A-PR2P0CX60 440 aa7.33□□□□□ -1.24
NPL4YBR170C TY1A-DR5P0CX65 440 aa7.33□□□□□ -1.24
NPL4YBR170C TY1A-ER2P0CX66 440 aa7.33□□□□□ -1.24
NPL4YBR170C TY1A-GR3P0CX67 440 aa7.33□□□□□ -1.24
NPL4YBR170C TY1A-LR1P0CX68 440 aa7.33□□□□□ -1.24
NPL4YBR170C TY1A-MR2P0CX69 440 aa7.33□□□□□ -1.24
NPL4YBR170C TY1A-JR2P47099 440 aa7.33□□□□□ -1.24
NPL4YBR170C TY1A-DR1Q03856 440 aa7.33□□□□□ -1.24
NPL4YBR170C TY1A-ML1Q04706 440 aaKnown RBP7.33□□□□□ -1.24
NPL4YBR170C TY1A-BRQ12217 440 aa7.33□□□□□ -1.24
NPL4YBR170C TY1A-NL2Q12470 440 aa7.33□□□□□ -1.24
NPL4YBR170C TY1A-GR2Q12485 440 aa7.33□□□□□ -1.24
NPL4YBR170C RLF2Q12495 606 aa7.33□□□□□ -1.24
NPL4YBR170C SEC2P17065 759 aa7.32□□□□□ -1.24
NPL4YBR170C RRN7P40992 514 aa7.31□□□□□ -1.24
NPL4YBR170C DSF2P38213 736 aa7.3□□□□□ -1.24
NPL4YBR170C BDP1P46678 594 aa7.3□□□□□ -1.24
NPL4YBR170C MAK21Q12176 1025 aaKnown RBP7.3□□□□□ -1.24
NPL4YBR170C MVP1P40959 511 aaKnown RBP7.29□□□□□ -1.24
NPL4YBR170C HED1Q03937 162 aa7.28□□□□□ -1.24
NPL4YBR170C MET22P32179 357 aa7.27□□□□□ -1.25
NPL4YBR170C ENV9Q08651 330 aa7.27□□□□□ -1.25
NPL4YBR170C PBS2P08018 668 aa7.26□□□□□ -1.25
NPL4YBR170C YPR109WQ06104 294 aa7.26□□□□□ -1.25
NPL4YBR170C COX6P00427 148 aa7.25□□□□□ -1.25
NPL4YBR170C YNR021WP53723 404 aaKnown RBP7.24□□□□□ -1.25
NPL4YBR170C KIN1P13185 1064 aa7.23□□□□□ -1.25
NPL4YBR170C YDR444WQ04093 687 aa7.21□□□□□ -1.25
NPL4YBR170C RGR1P19263 1082 aa7.21□□□□□ -1.26
NPL4YBR170C KEX2P13134 814 aa7.17□□□□□ -1.26
NPL4YBR170C HST3P53687 447 aa7.17□□□□□ -1.26
NPL4YBR170C GLC3P32775 704 aa7.16□□□□□ -1.26
NPL4YBR170C ASH1P34233 588 aa7.16□□□□□ -1.26
NPL4YBR170C AIM7Q12156 149 aa7.16□□□□□ -1.26
NPL4YBR170C MAM3Q12296 706 aa7.15□□□□□ -1.26
NPL4YBR170C AFT1P22149 690 aa7.14□□□□□ -1.27
NPL4YBR170C LCB5Q06147 687 aaKnown RBP7.14□□□□□ -1.27
NPL4YBR170C IES2P40154 320 aa7.13□□□□□ -1.27
NPL4YBR170C ERF2Q06551 359 aa7.13□□□□□ -1.27
NPL4YBR170C MET32Q12041 191 aa7.13□□□□□ -1.27
NPL4YBR170C HGH1P48362 394 aaKnown RBP7.12□□□□□ -1.27
NPL4YBR170C NUP42P49686 430 aaKnown RBP7.12□□□□□ -1.27
NPL4YBR170C DIT2P21595 489 aa7.11□□□□□ -1.27
NPL4YBR170C PAC1P39946 494 aaKnown RBP7.11□□□□□ -1.27
NPL4YBR170C MOD5P07884 428 aa7.1□□□□□ -1.27
NPL4YBR170C GUA1P38625 525 aaKnown RBP7.08□□□□□ -1.28
NPL4YBR170C CLB5P30283 435 aa7.07□□□□□ -1.28
NPL4YBR170C PUS5Q06244 254 aa7.07□□□□□ -1.28
NPL4YBR170C YDL176WQ12027 708 aa7.07□□□□□ -1.28
NPL4YBR170C PSE1P32337 1089 aaKnown RBP7.06□□□□□ -1.28
NPL4YBR170C RRD1P40454 393 aaKnown RBP7.06□□□□□ -1.28
NPL4YBR170C TUB4P53378 473 aa7.06□□□□□ -1.28
NPL4YBR170C RTF1P53064 558 aa7.04□□□□□ -1.28
NPL4YBR170C AGE1Q04412 482 aa7.04□□□□□ -1.28
NPL4YBR170C YJR115WP47152 169 aa7.04□□□□□ -1.28
NPL4YBR170C ATF2P53296 535 aa7.01□□□□□ -1.29
NPL4YBR170C HPC2Q01448 625 aa7.01□□□□□ -1.29
NPL4YBR170C KXD1P53158 218 aa7□□□□□ -1.29
NPL4YBR170C YNL115CP53925 644 aa7□□□□□ -1.29
NPL4YBR170C MSB3P48566 633 aaPredicted RBP6.97□□□□□ -1.29
NPL4YBR170C SYH1Q02875 849 aaKnown RBP6.96□□□□□ -1.29
NPL4YBR170C TFB3Q03290 321 aa6.96□□□□□ -1.3
NPL4YBR170C TPD3P31383 635 aa6.95□□□□□ -1.3
NPL4YBR170C UGA3P26370 528 aa6.93□□□□□ -1.3
NPL4YBR170C CAF120P53836 1060 aa6.93□□□□□ -1.3
NPL4YBR170C YLR346CQ06139 101 aa6.93□□□□□ -1.3
NPL4YBR170C HXT10P43581 546 aa6.93□□□□□ -1.3
NPL4YBR170C SRF1Q12516 437 aa6.93□□□□□ -1.3
NPL4YBR170C MTC5Q03897 1148 aa6.92□□□□□ -1.3
NPL4YBR170C SIT4P20604 311 aa6.91□□□□□ -1.3
NPL4YBR170C ACO2P39533 789 aa6.9□□□□□ -1.3
NPL4YBR170C TEA1P47988 759 aa6.9□□□□□ -1.3
NPL4YBR170C BRL1P38770 471 aa6.9□□□□□ -1.31
NPL4YBR170C PTK2P47116 818 aaKnown RBP6.89□□□□□ -1.31
NPL4YBR170C PKC1P24583 1151 aa6.88□□□□□ -1.31
NPL4YBR170C OPT2Q06593 877 aa6.88□□□□□ -1.31
NPL4YBR170C PDC1P06169 563 aaKnown RBP6.87□□□□□ -1.31
NPL4YBR170C YML020WQ03722 664 aa6.87□□□□□ -1.31
NPL4YBR170C SSA2P10592 639 aaKnown RBP6.86□□□□□ -1.31
NPL4YBR170C KIP2P28743 706 aa6.86□□□□□ -1.31
NPL4YBR170C SSA1P10591 642 aaKnown RBP6.85□□□□□ -1.31
NPL4YBR170C SUB2Q07478 446 aaKnown RBP6.85□□□□□ -1.31
NPL4YBR170C TRK2P28584 889 aa6.84□□□□□ -1.31
NPL4YBR170C CSN12P47130 423 aa6.84□□□□□ -1.31
NPL4YBR170C YGR035CP53222 116 aa6.84□□□□□ -1.31
NPL4YBR170C NIS1P53939 407 aa6.84□□□□□ -1.31
NPL4YBR170C GEF1P37020 779 aa6.84□□□□□ -1.31
NPL4YBR170C ALR1Q08269 859 aa6.84□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms