RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W VRP1P37370 817 aa7.15□□□□□ -1.26
CDC28YBR160W STR2P47164 639 aa7.15□□□□□ -1.26
CDC28YBR160W THO2P53552 1597 aaKnown RBP7.15□□□□□ -1.27
CDC28YBR160W REV3P14284 1504 aa7.14□□□□□ -1.27
CDC28YBR160W ISM1P48526 1002 aa7.13□□□□□ -1.27
CDC28YBR160W AIM7Q12156 149 aa7.13□□□□□ -1.27
CDC28YBR160W TEA1P47988 759 aa7.11□□□□□ -1.27
CDC28YBR160W BUD20Q08004 166 aaPredicted RBP7.11□□□□□ -1.27
CDC28YBR160W SSK2P53599 1579 aa7.11□□□□□ -1.27
CDC28YBR160W RPN1P38764 993 aaKnown RBP7.1□□□□□ -1.27
CDC28YBR160W TY1A-DR4O74302 440 aa7.09□□□□□ -1.27
CDC28YBR160W TY1A-HP0C2I4 478 aaKnown RBP7.09□□□□□ -1.27
CDC28YBR160W TY1A-AP0CX57 440 aa7.09□□□□□ -1.27
CDC28YBR160W TY1A-PR1P0CX58 440 aa7.09□□□□□ -1.27
CDC28YBR160W TY1A-ORP0CX59 440 aa7.09□□□□□ -1.27
CDC28YBR160W TY1A-PR2P0CX60 440 aa7.09□□□□□ -1.27
CDC28YBR160W TY1A-DR5P0CX65 440 aa7.09□□□□□ -1.27
CDC28YBR160W TY1A-ER2P0CX66 440 aa7.09□□□□□ -1.27
CDC28YBR160W TY1A-GR3P0CX67 440 aa7.09□□□□□ -1.27
CDC28YBR160W TY1A-LR1P0CX68 440 aa7.09□□□□□ -1.27
CDC28YBR160W TY1A-MR2P0CX69 440 aa7.09□□□□□ -1.27
CDC28YBR160W SIT4P20604 311 aa7.09□□□□□ -1.27
CDC28YBR160W XDJ1P39102 459 aa7.09□□□□□ -1.27
CDC28YBR160W TY1A-JR2P47099 440 aa7.09□□□□□ -1.27
CDC28YBR160W TY1A-DR1Q03856 440 aa7.09□□□□□ -1.27
CDC28YBR160W TY1A-ML1Q04706 440 aaKnown RBP7.09□□□□□ -1.27
CDC28YBR160W TY1A-BRQ12217 440 aa7.09□□□□□ -1.27
CDC28YBR160W TY1A-NL2Q12470 440 aa7.09□□□□□ -1.27
CDC28YBR160W TY1A-GR2Q12485 440 aa7.09□□□□□ -1.27
CDC28YBR160W NIS1P53939 407 aa7.08□□□□□ -1.28
CDC28YBR160W ATF2P53296 535 aa7.07□□□□□ -1.28
CDC28YBR160W SEC2P17065 759 aa7.05□□□□□ -1.28
CDC28YBR160W ERF2Q06551 359 aa7.05□□□□□ -1.28
CDC28YBR160W MYO2P19524 1574 aaKnown RBP7.04□□□□□ -1.28
CDC28YBR160W PRT1P06103 763 aaKnown RBP7.04□□□□□ -1.28
CDC28YBR160W KEX2P13134 814 aa7.04□□□□□ -1.28
CDC28YBR160W RTF1P53064 558 aa7.04□□□□□ -1.28
CDC28YBR160W SWR1Q05471 1514 aa7.04□□□□□ -1.28
CDC28YBR160W MON2P48563 1636 aaPredicted RBP7.03□□□□□ -1.28
CDC28YBR160W NPL4P33755 580 aa7.03□□□□□ -1.28
CDC28YBR160W FPK1P53739 893 aa7.03□□□□□ -1.28
CDC28YBR160W KIN1P13185 1064 aa7.02□□□□□ -1.29
CDC28YBR160W SDH2P21801 266 aa7.02□□□□□ -1.29
CDC28YBR160W SAS4Q04003 481 aa7.02□□□□□ -1.29
CDC28YBR160W STU1P38198 1513 aa7.01□□□□□ -1.29
CDC28YBR160W UFD4P33202 1483 aa7.01□□□□□ -1.29
CDC28YBR160W TAF2P23255 1407 aa7.01□□□□□ -1.29
CDC28YBR160W POL1P13382 1468 aa7□□□□□ -1.29
CDC28YBR160W HST2P53686 357 aa7□□□□□ -1.29
CDC28YBR160W YNL115CP53925 644 aa7□□□□□ -1.29
CDC28YBR160W GYP1Q08484 637 aa7□□□□□ -1.29
CDC28YBR160W ESP1Q03018 1630 aa7□□□□□ -1.29
CDC28YBR160W GCD11P32481 527 aaKnown RBP6.99□□□□□ -1.29
CDC28YBR160W AGE1Q04412 482 aa6.99□□□□□ -1.29
CDC28YBR160W YTA7P40340 1379 aa6.97□□□□□ -1.29
CDC28YBR160W KTR1P27810 393 aaKnown RBP6.97□□□□□ -1.29
CDC28YBR160W YMR196WQ04336 1088 aa6.96□□□□□ -1.3
CDC28YBR160W SCJ1P25303 377 aa6.94□□□□□ -1.3
CDC28YBR160W GLN1P32288 370 aaKnown RBP6.93□□□□□ -1.3
CDC28YBR160W PAC1P39946 494 aaKnown RBP6.93□□□□□ -1.3
CDC28YBR160W RRN7P40992 514 aa6.93□□□□□ -1.3
CDC28YBR160W TUB4P53378 473 aa6.93□□□□□ -1.3
CDC28YBR160W ECM5Q03214 1411 aa6.93□□□□□ -1.3
CDC28YBR160W TYW1Q08960 810 aaKnown RBP6.92□□□□□ -1.3
CDC28YBR160W MMP1Q12372 583 aa6.92□□□□□ -1.3
CDC28YBR160W TRM732Q03496 1420 aa6.92□□□□□ -1.3
CDC28YBR160W YPK9Q12697 1472 aa6.92□□□□□ -1.3
CDC28YBR160W SLY41P22215 453 aa6.91□□□□□ -1.3
CDC28YBR160W CSN12P47130 423 aa6.91□□□□□ -1.3
CDC28YBR160W MYO4P32492 1471 aa6.91□□□□□ -1.3
CDC28YBR160W ESS1P22696 170 aa6.9□□□□□ -1.3
CDC28YBR160W MRF1P30775 413 aaPredicted RBP6.9□□□□□ -1.3
CDC28YBR160W AMS1P22855 1083 aa6.89□□□□□ -1.31
CDC28YBR160W SPT16P32558 1035 aaKnown RBP6.89□□□□□ -1.31
CDC28YBR160W GUA1P38625 525 aaKnown RBP6.89□□□□□ -1.31
CDC28YBR160W IKI3Q06706 1349 aaKnown RBP6.89□□□□□ -1.31
CDC28YBR160W SPP41P38904 1435 aa6.88□□□□□ -1.31
CDC28YBR160W BUD4P47136 1447 aa6.88□□□□□ -1.31
CDC28YBR160W DPS1P04802 557 aaKnown RBP6.88□□□□□ -1.31
CDC28YBR160W MOD5P07884 428 aa6.88□□□□□ -1.31
CDC28YBR160W YJU3P28321 313 aa6.88□□□□□ -1.31
CDC28YBR160W DMA2P53924 522 aa6.88□□□□□ -1.31
CDC28YBR160W NUP170P38181 1502 aa6.87□□□□□ -1.31
CDC28YBR160W DNA2P38859 1522 aa6.87□□□□□ -1.31
CDC28YBR160W RAS1P01119 309 aa6.87□□□□□ -1.31
CDC28YBR160W TRM1P15565 570 aaKnown RBP6.87□□□□□ -1.31
CDC28YBR160W RSC30P38781 883 aa6.87□□□□□ -1.31
CDC28YBR160W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.87□□□□□ -1.31not detected
CDC28YBR160W BPT1P14772 1559 aa6.86□□□□□ -1.31
CDC28YBR160W YOR1P53049 1477 aa6.86□□□□□ -1.31
CDC28YBR160W PAT1P25644 796 aaKnown RBP6.86□□□□□ -1.31
CDC28YBR160W CST6P40535 587 aa6.86□□□□□ -1.31
CDC28YBR160W PUS6P53294 404 aa6.86□□□□□ -1.31
CDC28YBR160W YEL077CQ3E7X8 1277 aa6.86□□□□□ -1.31
CDC28YBR160W ATG2P53855 1592 aa6.86□□□□□ -1.31
CDC28YBR160W SSA2P10592 639 aaKnown RBP6.85□□□□□ -1.31
CDC28YBR160W NOP2P40991 618 aaKnown RBP6.85□□□□□ -1.31
CDC28YBR160W HPC2Q01448 625 aa6.85□□□□□ -1.31
CDC28YBR160W LAM6Q08001 693 aa6.85□□□□□ -1.31
CDC28YBR160W ERG12P07277 443 aa6.84□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms