RNA–Protein interactions for RNA: ENST00000639489.1

KCNMA1-262, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,302 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-262ENST00000639489 RGS3P49796 1198 aa19.44■□□□□ 0.7
KCNMA1-262ENST00000639489 TRHP20396 242 aaPredicted RBP19.44■□□□□ 0.7
KCNMA1-262ENST00000639489 FGD5Q6ZNL6 1462 aa19.43■□□□□ 0.7
KCNMA1-262ENST00000639489 ROCK2O75116 1388 aaKnown RBP19.42■□□□□ 0.7
KCNMA1-262ENST00000639489 CCDC18Q5T9S5 1454 aa19.4■□□□□ 0.7
KCNMA1-262ENST00000639489 MORC1Q86VD1 984 aa19.39■□□□□ 0.69
KCNMA1-262ENST00000639489 SPAG9O60271 1321 aaKnown RBP19.37■□□□□ 0.69
KCNMA1-262ENST00000639489 NCAPD3P42695 1498 aa19.35■□□□□ 0.69
KCNMA1-262ENST00000639489 NUTM2DQ5VT03 806 aaPredicted RBP19.35■□□□□ 0.69
KCNMA1-262ENST00000639489 ANP32BQ92688 251 aaKnown RBP19.35■□□□□ 0.69
KCNMA1-262ENST00000639489 HAP1P54257 671 aaPredicted RBP19.34■□□□□ 0.69
KCNMA1-262ENST00000639489 GAPVD1Q14C86 1478 aa19.33■□□□□ 0.69
KCNMA1-262ENST00000639489 KTN1Q86UP2 1357 aaKnown RBP19.33■□□□□ 0.68
KCNMA1-262ENST00000639489 RSPH4AQ5TD94 716 aa19.32■□□□□ 0.68
KCNMA1-262ENST00000639489 ZNF644Q9H582 1327 aaPredicted RBP19.31■□□□□ 0.68
KCNMA1-262ENST00000639489 ST20-MTHFSA0A0A6YYL1 179 aa19.31■□□□□ 0.68
KCNMA1-262ENST00000639489 PTPRGP23470 1445 aa19.3■□□□□ 0.68
KCNMA1-262ENST00000639489 AQRO60306 1485 aaKnown RBP eCLIP19.27■□□□□ 0.67
KCNMA1-262ENST00000639489 WASHC2CQ9Y4E1 1318 aa19.27■□□□□ 0.67
KCNMA1-262ENST00000639489 BECN1Q14457 450 aa19.26■□□□□ 0.67
KCNMA1-262ENST00000639489 PHLDB1Q86UU1 1377 aa19.26■□□□□ 0.67
KCNMA1-262ENST00000639489 U2AF1L5P0DN76 240 aaPredicted RBP19.25■□□□□ 0.67
KCNMA1-262ENST00000639489 HDGFP51858 240 aaKnown RBP19.25■□□□□ 0.67
KCNMA1-262ENST00000639489 U2AF1Q01081 240 aaKnown RBP eCLIP19.25■□□□□ 0.67
KCNMA1-262ENST00000639489 DDRGK1Q96HY6 314 aa19.25■□□□□ 0.67
KCNMA1-262ENST00000639489 EIF5BO60841 1220 aaKnown RBP19.24■□□□□ 0.67
KCNMA1-262ENST00000639489 RALBP1Q15311 655 aa19.24■□□□□ 0.67
KCNMA1-262ENST00000639489 KIF21BO75037 1637 aa19.23■□□□□ 0.67
KCNMA1-262ENST00000639489 TRAK1Q9UPV9 953 aa19.22■□□□□ 0.67
KCNMA1-262ENST00000639489 RCAN3Q9UKA8 241 aa19.21■□□□□ 0.67
KCNMA1-262ENST00000639489 HDGFL2Q7Z4V5 671 aaPredicted RBP19.19■□□□□ 0.66
KCNMA1-262ENST00000639489 NLRP13Q86W25 1043 aa19.19■□□□□ 0.66
KCNMA1-262ENST00000639489 CYB5RLQ6IPT4 315 aa19.18■□□□□ 0.66
KCNMA1-262ENST00000639489 SYNJ1O43426 1573 aa19.18■□□□□ 0.66
KCNMA1-262ENST00000639489 ARAP1Q96P48 1450 aa19.18■□□□□ 0.66
KCNMA1-262ENST00000639489 PNNQ9H307 717 aaKnown RBP19.17■□□□□ 0.66
KCNMA1-262ENST00000639489 CCDC144AA2RUR9 1427 aa19.17■□□□□ 0.66
KCNMA1-262ENST00000639489 NESP48681 1621 aa19.17■□□□□ 0.66
KCNMA1-262ENST00000639489 FGD6Q6ZV73 1430 aa19.17■□□□□ 0.66
KCNMA1-262ENST00000639489 CCDC146Q8IYE0 955 aa19.16■□□□□ 0.66
KCNMA1-262ENST00000639489 CFTRP13569 1480 aa19.15■□□□□ 0.66
KCNMA1-262ENST00000639489 RBM19Q9Y4C8 960 aaKnown RBP19.15■□□□□ 0.66
KCNMA1-262ENST00000639489 ANP32EQ9BTT0 268 aa19.15■□□□□ 0.66
KCNMA1-262ENST00000639489 NUTM2FA1L443 756 aa19.14■□□□□ 0.66
KCNMA1-262ENST00000639489 PRKRIP1Q9H875 184 aaPredicted RBP19.14■□□□□ 0.66
KCNMA1-262ENST00000639489 PANK3Q9H999 370 aa19.14■□□□□ 0.65
KCNMA1-262ENST00000639489 MS4A1P11836 297 aa19.13■□□□□ 0.65
KCNMA1-262ENST00000639489 PAK3O75914 559 aaPredicted RBP19.12■□□□□ 0.65
KCNMA1-262ENST00000639489 LRRC9Q6ZRR7 1453 aa19.12■□□□□ 0.65
KCNMA1-262ENST00000639489 MYOM3Q5VTT5 1437 aa19.11■□□□□ 0.65
KCNMA1-262ENST00000639489 USP47Q96K76 1375 aa19.09■□□□□ 0.65
KCNMA1-262ENST00000639489 NOP58Q9Y2X3 529 aaKnown RBP19.09■□□□□ 0.65
KCNMA1-262ENST00000639489 EIF3AQ14152 1382 aaKnown RBP19.09■□□□□ 0.65
KCNMA1-262ENST00000639489 TPRNQ4KMQ1 711 aa19.08■□□□□ 0.65
KCNMA1-262ENST00000639489 CLUAP1Q96AJ1 413 aa19.07■□□□□ 0.64
KCNMA1-262ENST00000639489 OSCARQ8IYS5 282 aa19.06■□□□□ 0.64
KCNMA1-262ENST00000639489 NCLP19338 710 aaKnown RBP19.06■□□□□ 0.64
KCNMA1-262ENST00000639489 GOLGA2Q08379 1002 aa19.06■□□□□ 0.64
KCNMA1-262ENST00000639489 APBB1O00213 710 aa19.06■□□□□ 0.64
KCNMA1-262ENST00000639489 CASC1Q6TDU7 716 aa19.06■□□□□ 0.64
KCNMA1-262ENST00000639489 RTF1Q92541 710 aaKnown RBP19.06■□□□□ 0.64
KCNMA1-262ENST00000639489 CHMP4BQ9H444 224 aaKnown RBP19.06■□□□□ 0.64
KCNMA1-262ENST00000639489 TERF2IPQ9NYB0 399 aa19.06■□□□□ 0.64
KCNMA1-262ENST00000639489 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.05■□□□□ 0.64
KCNMA1-262ENST00000639489 OS9Q13438 667 aaPredicted RBP19.05■□□□□ 0.64
KCNMA1-262ENST00000639489 KIF15Q9NS87 1388 aa19.04■□□□□ 0.64
KCNMA1-262ENST00000639489 RRP7AQ9Y3A4 280 aaKnown RBP19.04■□□□□ 0.64
KCNMA1-262ENST00000639489 GOLGA6L22H0YM25 854 aa19.03■□□□□ 0.64
KCNMA1-262ENST00000639489 PRXQ9BXM0 1461 aa19.03■□□□□ 0.64
KCNMA1-262ENST00000639489 CASKIN1Q8WXD9 1431 aa19.03■□□□□ 0.64
KCNMA1-262ENST00000639489 NCOA2Q15596 1464 aa19.02■□□□□ 0.64
KCNMA1-262ENST00000639489 DNAJC5BQ9UF47 199 aa19.02■□□□□ 0.64
KCNMA1-262ENST00000639489 MYBBP1AQ9BQG0 1328 aaKnown RBP19.01■□□□□ 0.63
KCNMA1-262ENST00000639489 ERICH6BQ5W0A0 696 aa19.01■□□□□ 0.63
KCNMA1-262ENST00000639489 UACAQ9BZF9 1416 aa19.01■□□□□ 0.63
KCNMA1-262ENST00000639489 AFAP1Q8N556 730 aa19.01■□□□□ 0.63
KCNMA1-262ENST00000639489 ITPRIPQ8IWB1 547 aa19■□□□□ 0.63
KCNMA1-262ENST00000639489 CUX1P39880 1505 aa18.99■□□□□ 0.63
KCNMA1-262ENST00000639489 TSHZ2Q9NRE2 1034 aa18.99■□□□□ 0.63
KCNMA1-262ENST00000639489 IPO8O15397 1037 aaKnown RBP18.99■□□□□ 0.63
KCNMA1-262ENST00000639489 SPRYD3Q8NCJ5 442 aa18.98■□□□□ 0.63
KCNMA1-262ENST00000639489 NGDNQ8NEJ9 315 aaKnown RBP18.97■□□□□ 0.63
KCNMA1-262ENST00000639489 ANKRD50Q9ULJ7 1429 aa18.97■□□□□ 0.63
KCNMA1-262ENST00000639489 GRIN2BQ13224 1484 aa18.97■□□□□ 0.63
KCNMA1-262ENST00000639489 ERICH3Q5RHP9 1530 aa18.97■□□□□ 0.63
KCNMA1-262ENST00000639489 SMC4Q9NTJ3 1288 aa18.97■□□□□ 0.63
KCNMA1-262ENST00000639489 VGFO15240 615 aaPredicted RBP18.97■□□□□ 0.63
KCNMA1-262ENST00000639489 PLIN1O60240 522 aa18.96■□□□□ 0.63
KCNMA1-262ENST00000639489 EID1Q9Y6B2 187 aa18.96■□□□□ 0.63
KCNMA1-262ENST00000639489 KIF7Q2M1P5 1343 aa18.96■□□□□ 0.62
KCNMA1-262ENST00000639489 MINK1Q8N4C8 1332 aaPredicted RBP18.96■□□□□ 0.62
KCNMA1-262ENST00000639489 POLA1P09884 1462 aaPredicted RBP18.95■□□□□ 0.62
KCNMA1-262ENST00000639489 HSP90AB1P08238 724 aaKnown RBP18.95■□□□□ 0.62
KCNMA1-262ENST00000639489 PDE3BQ13370 1112 aa18.95■□□□□ 0.62
KCNMA1-262ENST00000639489 TAOK2Q9UL54 1235 aa18.95■□□□□ 0.62
KCNMA1-262ENST00000639489 BCL2L13Q9BXK5 485 aa18.95■□□□□ 0.62
KCNMA1-262ENST00000639489 TOPBP1Q92547 1522 aa18.94■□□□□ 0.62
KCNMA1-262ENST00000639489 LTV1Q96GA3 475 aaPredicted RBP18.93■□□□□ 0.62
KCNMA1-262ENST00000639489 KCNJ4P48050 445 aa18.93■□□□□ 0.62
KCNMA1-262ENST00000639489 PRDM2Q13029 1718 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms