RNA–Protein interactions for RNA: ENST00000639489.1

KCNMA1-262, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,302 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-262ENST00000639489 DCAF8L2P0C7V8 631 aa26.56■■□□□ 1.84
KCNMA1-262ENST00000639489 NISCHQ9Y2I1 1504 aa26.26■■□□□ 1.79
KCNMA1-262ENST00000639489 SUPT5HO00267 1087 aaKnown RBP25.33■■□□□ 1.65
KCNMA1-262ENST00000639489 SHROOM4Q9ULL8 1493 aa25.12■■□□□ 1.61
KCNMA1-262ENST00000639489 EHMT2Q96KQ7 1210 aa24.36■■□□□ 1.49
KCNMA1-262ENST00000639489 FAM9AQ8IZU1 332 aaPredicted RBP23.85■■□□□ 1.41
KCNMA1-262ENST00000639489 TTBK1Q5TCY1 1321 aaPredicted RBP23.47■■□□□ 1.35
KCNMA1-262ENST00000639489 PCGF6Q9BYE7 350 aa23.46■■□□□ 1.35
KCNMA1-262ENST00000639489 APLP2Q06481 763 aa23.39■■□□□ 1.34
KCNMA1-262ENST00000639489 TRIM41Q8WV44 630 aa23.38■■□□□ 1.33
KCNMA1-262ENST00000639489 RANGAP1P46060 587 aaPredicted RBP23.27■■□□□ 1.31
KCNMA1-262ENST00000639489 UBTFP17480 764 aaKnown RBP22.98■■□□□ 1.27
KCNMA1-262ENST00000639489 PPARGC1BQ86YN6 1023 aaKnown RBP22.85■■□□□ 1.25
KCNMA1-262ENST00000639489 ATP1B4Q9UN42 357 aaPredicted RBP22.84■■□□□ 1.25
KCNMA1-262ENST00000639489 CCER1Q8TC90 406 aaPredicted RBP22.8■■□□□ 1.24
KCNMA1-262ENST00000639489 CHIC1Q5VXU3 224 aa22.77■■□□□ 1.24
KCNMA1-262ENST00000639489 LOC105371045A0A1W2PR82 267 aa22.74■■□□□ 1.23
KCNMA1-262ENST00000639489 ZEB1P37275 1124 aaPredicted RBP22.58■■□□□ 1.21
KCNMA1-262ENST00000639489 ABCC9O60706 1549 aa22.54■■□□□ 1.2
KCNMA1-262ENST00000639489 TRIM26Q12899 539 aaPredicted RBP22.43■■□□□ 1.18
KCNMA1-262ENST00000639489 PELP1Q8IZL8 1130 aaKnown RBP22.43■■□□□ 1.18
KCNMA1-262ENST00000639489 PABPN1Q86U42 306 aaKnown RBP eCLIP22.42■■□□□ 1.18
KCNMA1-262ENST00000639489 CENPBP07199 599 aaPredicted RBP22.27■■□□□ 1.15
KCNMA1-262ENST00000639489 ITGAEP38570 1179 aa22.25■■□□□ 1.15
KCNMA1-262ENST00000639489 HRCP23327 699 aa22.21■■□□□ 1.15
KCNMA1-262ENST00000639489 YTHDC1Q96MU7 727 aaKnown RBP22.17■■□□□ 1.14
KCNMA1-262ENST00000639489 HNRNPUL2Q1KMD3 747 aaKnown RBP22.15■■□□□ 1.14
KCNMA1-262ENST00000639489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.05■■□□□ 1.12
KCNMA1-262ENST00000639489 ZCCHC6Q5VYS8 1495 aaKnown RBP21.76■■□□□ 1.07
KCNMA1-262ENST00000639489 MYT1LQ9UL68 1186 aa21.73■■□□□ 1.07
KCNMA1-262ENST00000639489 NEFLP07196 543 aa21.71■■□□□ 1.07
KCNMA1-262ENST00000639489 POLR3GLQ9BT43 218 aa21.71■■□□□ 1.07
KCNMA1-262ENST00000639489 CNGB1Q14028 1251 aaPredicted RBP21.66■■□□□ 1.06
KCNMA1-262ENST00000639489 FAM50AQ14320 339 aaKnown RBP21.65■■□□□ 1.06
KCNMA1-262ENST00000639489 SCRIBQ14160 1630 aa21.62■■□□□ 1.05
KCNMA1-262ENST00000639489 CSRNP3Q8WYN3 585 aa21.58■■□□□ 1.05
KCNMA1-262ENST00000639489 ERICH6Q7L0X2 663 aa21.56■■□□□ 1.04
KCNMA1-262ENST00000639489 DIEXFQ68CQ4 756 aaKnown RBP21.52■■□□□ 1.04
KCNMA1-262ENST00000639489 P3H3Q8IVL6 736 aa21.48■■□□□ 1.03
KCNMA1-262ENST00000639489 FBLN2P98095 1184 aa21.46■■□□□ 1.03
KCNMA1-262ENST00000639489 NEUROD1Q13562 356 aa21.44■■□□□ 1.02
KCNMA1-262ENST00000639489 TRIM52Q96A61 297 aa21.4■■□□□ 1.02
KCNMA1-262ENST00000639489 ARID3CA6NKF2 412 aa21.36■■□□□ 1.01
KCNMA1-262ENST00000639489 CCDC180Q9P1Z9 1646 aa21.34■■□□□ 1.01
KCNMA1-262ENST00000639489 ZNF326Q5BKZ1 582 aaKnown RBP21.18■□□□□ 0.98
KCNMA1-262ENST00000639489 SLC4A1APQ9BWU0 796 aaKnown RBP21.16■□□□□ 0.98
KCNMA1-262ENST00000639489 RSF1Q96T23 1441 aaPredicted RBP21.12■□□□□ 0.97
KCNMA1-262ENST00000639489 ZNF316A6NFI3 1004 aaPredicted RBP21.09■□□□□ 0.97
KCNMA1-262ENST00000639489 ZNF777Q9ULD5 760 aaPredicted RBP21.03■□□□□ 0.96
KCNMA1-262ENST00000639489 MYO15BQ96JP2 1530 aa21.03■□□□□ 0.96
KCNMA1-262ENST00000639489 DCAF1Q9Y4B6 1507 aa20.99■□□□□ 0.95
KCNMA1-262ENST00000639489 GTF3C3Q9Y5Q9 886 aa20.97■□□□□ 0.95
KCNMA1-262ENST00000639489 ANP32CO43423 234 aa20.95■□□□□ 0.94
KCNMA1-262ENST00000639489 BCANQ96GW7 911 aa20.92■□□□□ 0.94
KCNMA1-262ENST00000639489 RB1CC1Q8TDY2 1594 aa20.92■□□□□ 0.94
KCNMA1-262ENST00000639489 CDK11AQ9UQ88 783 aaPredicted RBP20.87■□□□□ 0.93
KCNMA1-262ENST00000639489 DAXXQ9UER7 740 aaPredicted RBP20.83■□□□□ 0.92
KCNMA1-262ENST00000639489 CECR2Q9BXF3 1484 aa20.8■□□□□ 0.92
KCNMA1-262ENST00000639489 CHIC2Q9UKJ5 165 aa20.8■□□□□ 0.92
KCNMA1-262ENST00000639489 NACADO15069 1562 aa20.8■□□□□ 0.92
KCNMA1-262ENST00000639489 CLIP1P30622 1438 aa20.78■□□□□ 0.92
KCNMA1-262ENST00000639489 WRNQ14191 1432 aaPredicted RBP eCLIP20.72■□□□□ 0.91
KCNMA1-262ENST00000639489 ACIN1Q9UKV3 1341 aaKnown RBP20.71■□□□□ 0.91
KCNMA1-262ENST00000639489 TONSLQ96HA7 1378 aa20.7■□□□□ 0.9
KCNMA1-262ENST00000639489 CLSPNQ9HAW4 1339 aa20.69■□□□□ 0.9
KCNMA1-262ENST00000639489 DDX10Q13206 875 aaKnown RBP20.68■□□□□ 0.9
KCNMA1-262ENST00000639489 CEP162Q5TB80 1403 aa20.68■□□□□ 0.9
KCNMA1-262ENST00000639489 BAZ1BQ9UIG0 1483 aaKnown RBP20.66■□□□□ 0.9
KCNMA1-262ENST00000639489 MTUS2Q5JR59 1369 aa20.64■□□□□ 0.9
KCNMA1-262ENST00000639489 CHMP7Q8WUX9 453 aaPredicted RBP20.63■□□□□ 0.89
KCNMA1-262ENST00000639489 EEA1Q15075 1411 aa20.59■□□□□ 0.89
KCNMA1-262ENST00000639489 GOLGA3Q08378 1498 aa20.58■□□□□ 0.89
KCNMA1-262ENST00000639489 HIRIP3Q9BW71 556 aaPredicted RBP20.58■□□□□ 0.88
KCNMA1-262ENST00000639489 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.55■□□□□ 0.88
KCNMA1-262ENST00000639489 BAZ1AQ9NRL2 1556 aaPredicted RBP20.55■□□□□ 0.88
KCNMA1-262ENST00000639489 MYT1Q01538 1121 aa20.55■□□□□ 0.88
KCNMA1-262ENST00000639489 CHGAP10645 457 aaKnown RBP20.54■□□□□ 0.88
KCNMA1-262ENST00000639489 RRP7BPQ9NSQ0 103 aa20.52■□□□□ 0.88
KCNMA1-262ENST00000639489 TSPY4P0CV99 314 aa20.5■□□□□ 0.87
KCNMA1-262ENST00000639489 TSPY10P0CW01 314 aa20.5■□□□□ 0.87
KCNMA1-262ENST00000639489 TNIKQ9UKE5 1360 aa20.49■□□□□ 0.87
KCNMA1-262ENST00000639489 NPM1P06748 294 aaKnown RBP eCLIP20.47■□□□□ 0.87
KCNMA1-262ENST00000639489 KIF27Q86VH2 1401 aa20.47■□□□□ 0.87
KCNMA1-262ENST00000639489 MROH2BQ7Z745 1585 aa20.46■□□□□ 0.87
KCNMA1-262ENST00000639489 SOGA1O94964 1423 aa20.46■□□□□ 0.87
KCNMA1-262ENST00000639489 HNRNPUQ00839 825 aaKnown RBP eCLIP20.46■□□□□ 0.87
KCNMA1-262ENST00000639489 KDM2AQ9Y2K7 1162 aa20.45■□□□□ 0.86
KCNMA1-262ENST00000639489 FAM9BQ8IZU0 186 aa20.45■□□□□ 0.86
KCNMA1-262ENST00000639489 MIER1Q8N108 512 aa20.45■□□□□ 0.86
KCNMA1-262ENST00000639489 BCL11AQ9H165 835 aa20.41■□□□□ 0.86
KCNMA1-262ENST00000639489 CEP164Q9UPV0 1460 aa20.41■□□□□ 0.86
KCNMA1-262ENST00000639489 SALL2Q9Y467 1007 aaPredicted RBP20.4■□□□□ 0.86
KCNMA1-262ENST00000639489 FKBP8Q14318 412 aa20.39■□□□□ 0.85
KCNMA1-262ENST00000639489 KCNH8Q96L42 1107 aa20.39■□□□□ 0.85
KCNMA1-262ENST00000639489 RTL5Q5HYW3 569 aaPredicted RBP20.37■□□□□ 0.85
KCNMA1-262ENST00000639489 CANXP27824 592 aaKnown RBP20.36■□□□□ 0.85
KCNMA1-262ENST00000639489 PLPPR3Q6T4P5 718 aa20.36■□□□□ 0.85
KCNMA1-262ENST00000639489 SLC24A1O60721 1099 aa20.34■□□□□ 0.85
KCNMA1-262ENST00000639489 ESF1Q9H501 851 aaKnown RBP20.34■□□□□ 0.85
KCNMA1-262ENST00000639489 STAG3Q9UJ98 1225 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms