RNA–Protein interactions for RNA: ENST00000636987.1

ARHGEF4-218, Transcript of Rho guanine nucleotide exchange factor 4, humanhuman

TSL 2

Gene ARHGEF4, Length 3,656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4-218ENST00000636987 DISP1Q96F81 1524 aa13.87□□□□□ -0.19
ARHGEF4-218ENST00000636987 TIMELESSQ9UNS1 1208 aa13.86□□□□□ -0.19
ARHGEF4-218ENST00000636987 NPM1P06748 294 aaKnown RBP eCLIP13.86□□□□□ -0.19
ARHGEF4-218ENST00000636987 UGGT2Q9NYU1 1516 aa13.85□□□□□ -0.19
ARHGEF4-218ENST00000636987 PLB1Q6P1J6 1458 aa13.85□□□□□ -0.19
ARHGEF4-218ENST00000636987 EFCAB5A4FU69 1503 aa13.84□□□□□ -0.19
ARHGEF4-218ENST00000636987 PPP4R2Q9NY27 417 aa13.84□□□□□ -0.19
ARHGEF4-218ENST00000636987 KIAA0556O60303 1618 aa13.82□□□□□ -0.2
ARHGEF4-218ENST00000636987 CLASP1Q7Z460 1538 aa13.81□□□□□ -0.2
ARHGEF4-218ENST00000636987 PDIA4P13667 645 aaKnown RBP13.81□□□□□ -0.2
ARHGEF4-218ENST00000636987 CCER2I3L3R5 266 aa13.8□□□□□ -0.2
ARHGEF4-218ENST00000636987 MTUS2Q5JR59 1369 aa13.8□□□□□ -0.2
ARHGEF4-218ENST00000636987 LAS1LQ9Y4W2 734 aaKnown RBP13.8□□□□□ -0.2
ARHGEF4-218ENST00000636987 PLEKHD1A6NEE1 506 aa13.79□□□□□ -0.2
ARHGEF4-218ENST00000636987 PAK3O75914 559 aaPredicted RBP13.78□□□□□ -0.2
ARHGEF4-218ENST00000636987 TONSLQ96HA7 1378 aa13.78□□□□□ -0.2
ARHGEF4-218ENST00000636987 SAMD9Q5K651 1589 aa13.77□□□□□ -0.21
ARHGEF4-218ENST00000636987 ZMYND15Q9H091 742 aa13.77□□□□□ -0.21
ARHGEF4-218ENST00000636987 ARHGEF11O15085 1522 aa13.77□□□□□ -0.21
ARHGEF4-218ENST00000636987 PCF11O94913 1555 aaKnown RBP13.76□□□□□ -0.21
ARHGEF4-218ENST00000636987 MRS2Q9HD23 443 aa13.75□□□□□ -0.21
ARHGEF4-218ENST00000636987 CASKIN1Q8WXD9 1431 aa13.75□□□□□ -0.21
ARHGEF4-218ENST00000636987 UACAQ9BZF9 1416 aa13.75□□□□□ -0.21
ARHGEF4-218ENST00000636987 CDK13Q14004 1512 aaKnown RBP13.74□□□□□ -0.21
ARHGEF4-218ENST00000636987 RAB3GAP2Q9H2M9 1393 aa13.74□□□□□ -0.21
ARHGEF4-218ENST00000636987 ZNF777Q9ULD5 760 aaPredicted RBP13.74□□□□□ -0.21
ARHGEF4-218ENST00000636987 CCNB3Q8WWL7 1395 aa13.73□□□□□ -0.21
ARHGEF4-218ENST00000636987 VSIG10Q8N0Z9 540 aa13.73□□□□□ -0.21
ARHGEF4-218ENST00000636987 NEFMP07197 916 aa13.72□□□□□ -0.21
ARHGEF4-218ENST00000636987 PPP1R15AO75807 674 aaPredicted RBP13.71□□□□□ -0.21
ARHGEF4-218ENST00000636987 DNAJC5Q9H3Z4 198 aa13.7□□□□□ -0.22
ARHGEF4-218ENST00000636987 FYCO1Q9BQS8 1478 aa13.7□□□□□ -0.22
ARHGEF4-218ENST00000636987 SHROOM2Q13796 1616 aa13.7□□□□□ -0.22
ARHGEF4-218ENST00000636987 NUP153P49790 1475 aaKnown RBP13.69□□□□□ -0.22
ARHGEF4-218ENST00000636987 EPRSP07814 1512 aaKnown RBP13.69□□□□□ -0.22
ARHGEF4-218ENST00000636987 FGD1P98174 961 aa13.68□□□□□ -0.22
ARHGEF4-218ENST00000636987 RAPGEF6Q8TEU7 1601 aa13.67□□□□□ -0.22
ARHGEF4-218ENST00000636987 TRHP20396 242 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF4-218ENST00000636987 ERICH6BQ5W0A0 696 aa13.66□□□□□ -0.22
ARHGEF4-218ENST00000636987 IPO9Q96P70 1041 aaKnown RBP13.66□□□□□ -0.22
ARHGEF4-218ENST00000636987 ATP10BO94823 1461 aa13.65□□□□□ -0.22
ARHGEF4-218ENST00000636987 HECW1Q76N89 1606 aa13.65□□□□□ -0.22
ARHGEF4-218ENST00000636987 RIMBP3CA6NJZ7 1639 aa13.65□□□□□ -0.22
ARHGEF4-218ENST00000636987 RIMBP3BA6NNM3 1639 aa13.65□□□□□ -0.22
ARHGEF4-218ENST00000636987 RIMBP3Q9UFD9 1639 aa13.65□□□□□ -0.22
ARHGEF4-218ENST00000636987 RBM10P98175 930 aaKnown RBP13.65□□□□□ -0.23
ARHGEF4-218ENST00000636987 LRRC9Q6ZRR7 1453 aa13.62□□□□□ -0.23
ARHGEF4-218ENST00000636987 TIAM1Q13009 1591 aa13.62□□□□□ -0.23
ARHGEF4-218ENST00000636987 ABCC2Q92887 1545 aa13.62□□□□□ -0.23
ARHGEF4-218ENST00000636987 CCDC18Q5T9S5 1454 aa13.62□□□□□ -0.23
ARHGEF4-218ENST00000636987 CFDP1Q9UEE9 299 aaPredicted RBP13.61□□□□□ -0.23
ARHGEF4-218ENST00000636987 ABCA8O94911 1581 aa13.6□□□□□ -0.23
ARHGEF4-218ENST00000636987 FAM69CQ0P6D2 419 aa13.6□□□□□ -0.23
ARHGEF4-218ENST00000636987 PLPPR3Q6T4P5 718 aa13.59□□□□□ -0.23
ARHGEF4-218ENST00000636987 SETD5Q9C0A6 1442 aa13.59□□□□□ -0.23
ARHGEF4-218ENST00000636987 AAMPQ13685 434 aa13.58□□□□□ -0.24
ARHGEF4-218ENST00000636987 ZNF326Q5BKZ1 582 aaKnown RBP13.58□□□□□ -0.24
ARHGEF4-218ENST00000636987 PHLDB1Q86UU1 1377 aa13.57□□□□□ -0.24
ARHGEF4-218ENST00000636987 CHIC2Q9UKJ5 165 aa13.57□□□□□ -0.24
ARHGEF4-218ENST00000636987 TROQ12816 1431 aaPredicted RBP13.57□□□□□ -0.24
ARHGEF4-218ENST00000636987 DHX37Q8IY37 1157 aaKnown RBP13.57□□□□□ -0.24
ARHGEF4-218ENST00000636987 ASXL2Q76L83 1435 aa13.56□□□□□ -0.24
ARHGEF4-218ENST00000636987 PAXIP1Q6ZW49 1069 aaPredicted RBP13.56□□□□□ -0.24
ARHGEF4-218ENST00000636987 ARXQ96QS3 562 aa13.56□□□□□ -0.24
ARHGEF4-218ENST00000636987 ZNF644Q9H582 1327 aaPredicted RBP13.56□□□□□ -0.24
ARHGEF4-218ENST00000636987 NCOA2Q15596 1464 aa13.55□□□□□ -0.24
ARHGEF4-218ENST00000636987 ADCY10Q96PN6 1610 aa13.55□□□□□ -0.24
ARHGEF4-218ENST00000636987 EIF4G2P78344 907 aaKnown RBP eCLIP13.55□□□□□ -0.24
ARHGEF4-218ENST00000636987 MAGI3Q5TCQ9 1506 aa13.55□□□□□ -0.24
ARHGEF4-218ENST00000636987 CCDC184Q52MB2 194 aa13.54□□□□□ -0.24
ARHGEF4-218ENST00000636987 HSPA5P11021 654 aaKnown RBP13.53□□□□□ -0.24
ARHGEF4-218ENST00000636987 BRPF3Q9ULD4 1205 aa13.52□□□□□ -0.25
ARHGEF4-218ENST00000636987 KDM5BQ9UGL1 1544 aa13.52□□□□□ -0.25
ARHGEF4-218ENST00000636987 UHRF1BP1LA0JNW5 1464 aa13.51□□□□□ -0.25
ARHGEF4-218ENST00000636987 LRRIQ1Q96JM4 1722 aa13.51□□□□□ -0.25
ARHGEF4-218ENST00000636987 EHBP1L1Q8N3D4 1523 aa13.51□□□□□ -0.25
ARHGEF4-218ENST00000636987 PPM1GO15355 546 aaPredicted RBP13.5□□□□□ -0.25
ARHGEF4-218ENST00000636987 HNRNPMP52272 730 aaKnown RBP eCLIP13.5□□□□□ -0.25
ARHGEF4-218ENST00000636987 ZCCHC11Q5TAX3 1644 aaKnown RBP13.5□□□□□ -0.25
ARHGEF4-218ENST00000636987 WDR7Q9Y4E6 1490 aa13.49□□□□□ -0.25
ARHGEF4-218ENST00000636987 RRBP1Q9P2E9 1410 aaKnown RBP13.49□□□□□ -0.25
ARHGEF4-218ENST00000636987 EFCAB2Q5VUJ9 269 aa13.48□□□□□ -0.25
ARHGEF4-218ENST00000636987 MAP3K1Q13233 1512 aa13.48□□□□□ -0.25
ARHGEF4-218ENST00000636987 TMC1Q8TDI8 760 aa13.47□□□□□ -0.25
ARHGEF4-218ENST00000636987 CFAP43Q8NDM7 1665 aa13.47□□□□□ -0.25
ARHGEF4-218ENST00000636987 KIF14Q15058 1648 aa13.47□□□□□ -0.25
ARHGEF4-218ENST00000636987 MYOM3Q5VTT5 1437 aa13.47□□□□□ -0.25
ARHGEF4-218ENST00000636987 SLC4A3P48751 1232 aa13.46□□□□□ -0.25
ARHGEF4-218ENST00000636987 RRP7BPQ9NSQ0 103 aa13.46□□□□□ -0.25
ARHGEF4-218ENST00000636987 FGD6Q6ZV73 1430 aa13.45□□□□□ -0.26
ARHGEF4-218ENST00000636987 SUPT6HQ7KZ85 1726 aaKnown RBP13.45□□□□□ -0.26
ARHGEF4-218ENST00000636987 TSPY4P0CV99 314 aa13.44□□□□□ -0.26
ARHGEF4-218ENST00000636987 TSPY10P0CW01 314 aa13.44□□□□□ -0.26
ARHGEF4-218ENST00000636987 CD109Q6YHK3 1445 aa13.43□□□□□ -0.26
ARHGEF4-218ENST00000636987 ARHGAP5Q13017 1502 aa13.43□□□□□ -0.26
ARHGEF4-218ENST00000636987 PRKRIP1Q9H875 184 aaPredicted RBP13.43□□□□□ -0.26
ARHGEF4-218ENST00000636987 ZBED9Q6R2W3 1325 aa13.42□□□□□ -0.26
ARHGEF4-218ENST00000636987 NCBP3Q53F19 620 aaKnown RBP13.42□□□□□ -0.26
ARHGEF4-218ENST00000636987 AFAP1Q8N556 730 aa13.42□□□□□ -0.26
ARHGEF4-218ENST00000636987 GPATCH8Q9UKJ3 1502 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms