RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 ATMINO43313 823 aaPredicted RBP10.95□□□□□ -0.66
UPF3B-205ENST00000636792 MAMSTRQ6ZN01 415 aa10.95□□□□□ -0.66
UPF3B-205ENST00000636792 FAM9AQ8IZU1 332 aaPredicted RBP10.94□□□□□ -0.66
UPF3B-205ENST00000636792 TSPYL2Q9H2G4 693 aaPredicted RBP10.94□□□□□ -0.66
UPF3B-205ENST00000636792 TNIKQ9UKE5 1360 aa10.93□□□□□ -0.66
UPF3B-205ENST00000636792 POTEGQ6S5H5 508 aa10.93□□□□□ -0.66
UPF3B-205ENST00000636792 SAMD9Q5K651 1589 aa10.93□□□□□ -0.66
UPF3B-205ENST00000636792 KIAA0556O60303 1618 aa10.91□□□□□ -0.66
UPF3B-205ENST00000636792 CARMIL2Q6F5E8 1435 aa10.9□□□□□ -0.66
UPF3B-205ENST00000636792 PLEKHG5O94827 1062 aa10.89□□□□□ -0.67
UPF3B-205ENST00000636792 PCDH10Q9P2E7 1040 aa10.87□□□□□ -0.67
UPF3B-205ENST00000636792 DISP1Q96F81 1524 aa10.86□□□□□ -0.67
UPF3B-205ENST00000636792 PROM2Q8N271 834 aa10.86□□□□□ -0.67
UPF3B-205ENST00000636792 CCDC61Q9Y6R9 512 aa10.86□□□□□ -0.67
UPF3B-205ENST00000636792 ARHGEF11O15085 1522 aa10.85□□□□□ -0.67
UPF3B-205ENST00000636792 UBTFP17480 764 aaKnown RBP10.85□□□□□ -0.67
UPF3B-205ENST00000636792 SCUBE2Q9NQ36 999 aa10.85□□□□□ -0.67
UPF3B-205ENST00000636792 PRG4Q92954 1404 aaPredicted RBP10.84□□□□□ -0.67
UPF3B-205ENST00000636792 JPH4Q96JJ6 628 aa10.84□□□□□ -0.67
UPF3B-205ENST00000636792 RIMBP3CA6NJZ7 1639 aa10.84□□□□□ -0.67
UPF3B-205ENST00000636792 RIMBP3BA6NNM3 1639 aa10.84□□□□□ -0.67
UPF3B-205ENST00000636792 RIMBP3Q9UFD9 1639 aa10.84□□□□□ -0.67
UPF3B-205ENST00000636792 ATN1P54259 1190 aaPredicted RBP10.83□□□□□ -0.68
UPF3B-205ENST00000636792 KIF12Q96FN5 646 aa10.83□□□□□ -0.68
UPF3B-205ENST00000636792 CEP162Q5TB80 1403 aa10.83□□□□□ -0.68
UPF3B-205ENST00000636792 POTEJP0CG39 1038 aa10.82□□□□□ -0.68
UPF3B-205ENST00000636792 CLIP1P30622 1438 aa10.82□□□□□ -0.68
UPF3B-205ENST00000636792 ARHGAP35Q9NRY4 1499 aa10.81□□□□□ -0.68
UPF3B-205ENST00000636792 FMN1Q68DA7 1419 aa10.8□□□□□ -0.68
UPF3B-205ENST00000636792 ERCC6L2Q5T890 1561 aa10.78□□□□□ -0.68
UPF3B-205ENST00000636792 MIER1Q8N108 512 aa10.78□□□□□ -0.68
UPF3B-205ENST00000636792 BMP2KQ9NSY1 1161 aaPredicted RBP10.78□□□□□ -0.68
UPF3B-205ENST00000636792 FAM163AQ96GL9 167 aaPredicted RBP10.77□□□□□ -0.69
UPF3B-205ENST00000636792 HECW1Q76N89 1606 aa10.76□□□□□ -0.69
UPF3B-205ENST00000636792 UHRF1BP1LA0JNW5 1464 aa10.76□□□□□ -0.69
UPF3B-205ENST00000636792 ARAP1Q96P48 1450 aa10.76□□□□□ -0.69
UPF3B-205ENST00000636792 TIE1P35590 1138 aa10.76□□□□□ -0.69
UPF3B-205ENST00000636792 ABCA8O94911 1581 aa10.76□□□□□ -0.69
UPF3B-205ENST00000636792 RAPGEF6Q8TEU7 1601 aa10.76□□□□□ -0.69
UPF3B-205ENST00000636792 MAP3K13O43283 966 aa10.75□□□□□ -0.69
UPF3B-205ENST00000636792 DNAJC5Q9H3Z4 198 aa10.75□□□□□ -0.69
UPF3B-205ENST00000636792 PTPRGP23470 1445 aa10.75□□□□□ -0.69
UPF3B-205ENST00000636792 FYCO1Q9BQS8 1478 aa10.74□□□□□ -0.69
UPF3B-205ENST00000636792 ABCC2Q92887 1545 aa10.74□□□□□ -0.69
UPF3B-205ENST00000636792 FHOD3Q2V2M9 1422 aa10.74□□□□□ -0.69
UPF3B-205ENST00000636792 VPS8Q8N3P4 1428 aa10.72□□□□□ -0.69
UPF3B-205ENST00000636792 UACAQ9BZF9 1416 aa10.72□□□□□ -0.69
UPF3B-205ENST00000636792 LOC105371045A0A1W2PR82 267 aa10.71□□□□□ -0.69
UPF3B-205ENST00000636792 PCF11O94913 1555 aaKnown RBP10.71□□□□□ -0.69
UPF3B-205ENST00000636792 SEC24BO95487 1268 aa10.71□□□□□ -0.69
UPF3B-205ENST00000636792 CCDC18Q5T9S5 1454 aa10.71□□□□□ -0.69
UPF3B-205ENST00000636792 RASEFQ8IZ41 740 aa10.71□□□□□ -0.69
UPF3B-205ENST00000636792 ADCY10Q96PN6 1610 aa10.71□□□□□ -0.69
UPF3B-205ENST00000636792 TRPC6Q9Y210 931 aa10.71□□□□□ -0.69
UPF3B-205ENST00000636792 CASKIN1Q8WXD9 1431 aa10.7□□□□□ -0.7
UPF3B-205ENST00000636792 KDM5BQ9UGL1 1544 aa10.69□□□□□ -0.7
UPF3B-205ENST00000636792 PLCD3Q8N3E9 789 aa10.69□□□□□ -0.7
UPF3B-205ENST00000636792 CFAP43Q8NDM7 1665 aa10.69□□□□□ -0.7
UPF3B-205ENST00000636792 MAP3K1Q13233 1512 aa10.68□□□□□ -0.7
UPF3B-205ENST00000636792 POTEFA5A3E0 1075 aa10.68□□□□□ -0.7
UPF3B-205ENST00000636792 TTLL13PA6NNM8 815 aa10.67□□□□□ -0.7
UPF3B-205ENST00000636792 MAPKBP1O60336 1514 aa10.67□□□□□ -0.7
UPF3B-205ENST00000636792 PLB1Q6P1J6 1458 aa10.67□□□□□ -0.7
UPF3B-205ENST00000636792 ZCCHC11Q5TAX3 1644 aaKnown RBP10.66□□□□□ -0.7
UPF3B-205ENST00000636792 LCE2DQ5TA82 110 aaPredicted RBP10.66□□□□□ -0.7
UPF3B-205ENST00000636792 SGIP1Q9BQI5 828 aa10.66□□□□□ -0.7
UPF3B-205ENST00000636792 ZBTB47Q9UFB7 747 aaPredicted RBP10.66□□□□□ -0.7
UPF3B-205ENST00000636792 NUP153P49790 1475 aaKnown RBP10.66□□□□□ -0.7
UPF3B-205ENST00000636792 LRRIQ1Q96JM4 1722 aa10.65□□□□□ -0.7
UPF3B-205ENST00000636792 IER5LQ5T953 404 aa10.64□□□□□ -0.71
UPF3B-205ENST00000636792 EPRSP07814 1512 aaKnown RBP10.63□□□□□ -0.71
UPF3B-205ENST00000636792 COLQQ9Y215 455 aaPredicted RBP10.63□□□□□ -0.71
UPF3B-205ENST00000636792 PCDHB13Q9Y5F0 798 aa10.63□□□□□ -0.71
UPF3B-205ENST00000636792 TIAM1Q13009 1591 aa10.62□□□□□ -0.71
UPF3B-205ENST00000636792 TRIM35Q9UPQ4 493 aa10.62□□□□□ -0.71
UPF3B-205ENST00000636792 RANGAP1P46060 587 aaPredicted RBP10.61□□□□□ -0.71
UPF3B-205ENST00000636792 P3H3Q8IVL6 736 aa10.61□□□□□ -0.71
UPF3B-205ENST00000636792 EHBP1L1Q8N3D4 1523 aa10.6□□□□□ -0.71
UPF3B-205ENST00000636792 ATP10BO94823 1461 aa10.59□□□□□ -0.71
UPF3B-205ENST00000636792 WDR7Q9Y4E6 1490 aa10.58□□□□□ -0.72
UPF3B-205ENST00000636792 CYB5RLQ6IPT4 315 aa10.58□□□□□ -0.72
UPF3B-205ENST00000636792 CDK11AQ9UQ88 783 aaPredicted RBP10.58□□□□□ -0.72
UPF3B-205ENST00000636792 CDK13Q14004 1512 aaKnown RBP10.58□□□□□ -0.72
UPF3B-205ENST00000636792 KIF14Q15058 1648 aa10.57□□□□□ -0.72
UPF3B-205ENST00000636792 GLI2P10070 1586 aa10.56□□□□□ -0.72
UPF3B-205ENST00000636792 FAM212AQ96EL1 285 aa10.56□□□□□ -0.72
UPF3B-205ENST00000636792 SUPT6HQ7KZ85 1726 aaKnown RBP10.55□□□□□ -0.72
UPF3B-205ENST00000636792 TROQ12816 1431 aaPredicted RBP10.55□□□□□ -0.72
UPF3B-205ENST00000636792 ASXL2Q76L83 1435 aa10.55□□□□□ -0.72
UPF3B-205ENST00000636792 ABCA9Q8IUA7 1624 aa10.55□□□□□ -0.72
UPF3B-205ENST00000636792 NUBP1P53384 320 aa10.54□□□□□ -0.72
UPF3B-205ENST00000636792 DIP2BQ9P265 1576 aa10.54□□□□□ -0.72
UPF3B-205ENST00000636792 ITSN2Q9NZM3 1697 aa10.53□□□□□ -0.72
UPF3B-205ENST00000636792 ARAP3Q8WWN8 1544 aa10.53□□□□□ -0.72
UPF3B-205ENST00000636792 PLCG2P16885 1265 aa10.53□□□□□ -0.72
UPF3B-205ENST00000636792 IFNL1Q8IU54 200 aa10.53□□□□□ -0.72
UPF3B-205ENST00000636792 SLAIN1Q8ND83 568 aa10.53□□□□□ -0.72
UPF3B-205ENST00000636792 TMEM106CQ9BVX2 250 aa10.53□□□□□ -0.72
UPF3B-205ENST00000636792 LRRC9Q6ZRR7 1453 aa10.53□□□□□ -0.72
UPF3B-205ENST00000636792 KIF13AQ9H1H9 1805 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms