RNA–Protein interactions for RNA: ENST00000616552.4

MCM3-207, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-207ENST00000616552 URB2Q14146 1524 aaKnown RBP12.8□□□□□ -0.36
MCM3-207ENST00000616552 MPHOSPH9Q99550 1183 aa12.78□□□□□ -0.36
MCM3-207ENST00000616552 EFCAB5A4FU69 1503 aa12.78□□□□□ -0.36
MCM3-207ENST00000616552 DENND4BO75064 1496 aaPredicted RBP12.78□□□□□ -0.36
MCM3-207ENST00000616552 HFM1A2PYH4 1435 aa12.77□□□□□ -0.37
MCM3-207ENST00000616552 NUDCQ9Y266 331 aa12.77□□□□□ -0.37
MCM3-207ENST00000616552 PLIN1O60240 522 aa12.77□□□□□ -0.37
MCM3-207ENST00000616552 PTPN23Q9H3S7 1636 aa12.75□□□□□ -0.37
MCM3-207ENST00000616552 POLR1AO95602 1720 aaPredicted RBP12.75□□□□□ -0.37
MCM3-207ENST00000616552 FYCO1Q9BQS8 1478 aa12.75□□□□□ -0.37
MCM3-207ENST00000616552 TOPBP1Q92547 1522 aa12.74□□□□□ -0.37
MCM3-207ENST00000616552 KDM6BO15054 1643 aa12.74□□□□□ -0.37
MCM3-207ENST00000616552 WDR62O43379 1518 aa12.74□□□□□ -0.37
MCM3-207ENST00000616552 EIF5BO60841 1220 aaKnown RBP12.74□□□□□ -0.37
MCM3-207ENST00000616552 FGD5Q6ZNL6 1462 aa12.74□□□□□ -0.37
MCM3-207ENST00000616552 RAD54L2Q9Y4B4 1467 aa12.74□□□□□ -0.37
MCM3-207ENST00000616552 NCOA1Q15788 1441 aa12.72□□□□□ -0.37
MCM3-207ENST00000616552 PDE4AP27815 886 aa12.72□□□□□ -0.37
MCM3-207ENST00000616552 NCOA2Q15596 1464 aa12.72□□□□□ -0.37
MCM3-207ENST00000616552 ABCA5Q8WWZ7 1642 aa12.72□□□□□ -0.37
MCM3-207ENST00000616552 FMN1Q68DA7 1419 aa12.72□□□□□ -0.37
MCM3-207ENST00000616552 DNMBPQ6XZF7 1577 aa12.72□□□□□ -0.37
MCM3-207ENST00000616552 TMC1Q8TDI8 760 aa12.7□□□□□ -0.38
MCM3-207ENST00000616552 CDCA7LQ96GN5 454 aa12.7□□□□□ -0.38
MCM3-207ENST00000616552 SMG6Q86US8 1419 aaKnown RBP12.69□□□□□ -0.38
MCM3-207ENST00000616552 ZNF644Q9H582 1327 aaPredicted RBP12.69□□□□□ -0.38
MCM3-207ENST00000616552 CASKIN1Q8WXD9 1431 aa12.68□□□□□ -0.38
MCM3-207ENST00000616552 SLC4A1APQ9BWU0 796 aaKnown RBP12.67□□□□□ -0.38
MCM3-207ENST00000616552 PNISRQ8TF01 805 aaKnown RBP12.67□□□□□ -0.38
MCM3-207ENST00000616552 HECW1Q76N89 1606 aa12.67□□□□□ -0.38
MCM3-207ENST00000616552 GCC2Q8IWJ2 1684 aa12.66□□□□□ -0.38
MCM3-207ENST00000616552 POLA1P09884 1462 aaPredicted RBP12.66□□□□□ -0.38
MCM3-207ENST00000616552 CTTNBP2Q8WZ74 1663 aa12.66□□□□□ -0.38
MCM3-207ENST00000616552 MYOM3Q5VTT5 1437 aa12.65□□□□□ -0.38
MCM3-207ENST00000616552 CUL7Q14999 1698 aa12.65□□□□□ -0.38
MCM3-207ENST00000616552 DHX29Q7Z478 1369 aaKnown RBP12.65□□□□□ -0.38
MCM3-207ENST00000616552 KDM2AQ9Y2K7 1162 aa12.65□□□□□ -0.38
MCM3-207ENST00000616552 RNF123Q5XPI4 1314 aa12.65□□□□□ -0.38
MCM3-207ENST00000616552 RRP1P56182 461 aaKnown RBP12.65□□□□□ -0.38
MCM3-207ENST00000616552 BACH2Q9BYV9 841 aa12.64□□□□□ -0.39
MCM3-207ENST00000616552 FRAT1Q92837 279 aaPredicted RBP12.63□□□□□ -0.39
MCM3-207ENST00000616552 C20orf194Q5TEA3 1177 aa12.62□□□□□ -0.39
MCM3-207ENST00000616552 RCAN3Q9UKA8 241 aa12.62□□□□□ -0.39
MCM3-207ENST00000616552 ARHGEF11O15085 1522 aa12.61□□□□□ -0.39
MCM3-207ENST00000616552 TDRD9Q8NDG6 1382 aaKnown RBP12.61□□□□□ -0.39
MCM3-207ENST00000616552 SNAPC4Q5SXM2 1469 aa12.61□□□□□ -0.39
MCM3-207ENST00000616552 MAGI3Q5TCQ9 1506 aa12.61□□□□□ -0.39
MCM3-207ENST00000616552 NFKBIBQ15653 356 aa12.6□□□□□ -0.39
MCM3-207ENST00000616552 ARXQ96QS3 562 aa12.6□□□□□ -0.39
MCM3-207ENST00000616552 SPATA31E1Q6ZUB1 1445 aa12.6□□□□□ -0.39
MCM3-207ENST00000616552 SAMD9Q5K651 1589 aa12.59□□□□□ -0.39
MCM3-207ENST00000616552 CRBNQ96SW2 442 aa12.59□□□□□ -0.39
MCM3-207ENST00000616552 ZNF608Q9ULD9 1512 aaPredicted RBP12.59□□□□□ -0.39
MCM3-207ENST00000616552 ANKRD30BQ9BXX2 1392 aa12.58□□□□□ -0.4
MCM3-207ENST00000616552 IFT140Q96RY7 1462 aa12.58□□□□□ -0.4
MCM3-207ENST00000616552 USP47Q96K76 1375 aa12.58□□□□□ -0.4
MCM3-207ENST00000616552 TCOF1Q13428 1488 aaKnown RBP12.57□□□□□ -0.4
MCM3-207ENST00000616552 GSE1Q14687 1217 aa12.57□□□□□ -0.4
MCM3-207ENST00000616552 ST20-MTHFSA0A0A6YYL1 179 aa12.57□□□□□ -0.4
MCM3-207ENST00000616552 FRAT2O75474 233 aaPredicted RBP12.57□□□□□ -0.4
MCM3-207ENST00000616552 LRRIQ1Q96JM4 1722 aa12.57□□□□□ -0.4
MCM3-207ENST00000616552 ZNF777Q9ULD5 760 aaPredicted RBP12.57□□□□□ -0.4
MCM3-207ENST00000616552 TARBP1Q13395 1621 aaKnown RBP12.57□□□□□ -0.4
MCM3-207ENST00000616552 TCERG1O14776 1098 aaKnown RBP12.56□□□□□ -0.4
MCM3-207ENST00000616552 DCAF11Q8TEB1 546 aa12.56□□□□□ -0.4
MCM3-207ENST00000616552 WASHC2CQ9Y4E1 1318 aa12.55□□□□□ -0.4
MCM3-207ENST00000616552 CC2D1BQ5T0F9 858 aaKnown RBP12.55□□□□□ -0.4
MCM3-207ENST00000616552 SUPT6HQ7KZ85 1726 aaKnown RBP12.54□□□□□ -0.4
MCM3-207ENST00000616552 RGS3P49796 1198 aa12.54□□□□□ -0.4
MCM3-207ENST00000616552 TEX14Q8IWB6 1497 aa12.54□□□□□ -0.4
MCM3-207ENST00000616552 CARD11Q9BXL7 1154 aa12.54□□□□□ -0.4
MCM3-207ENST00000616552 BCORL1Q5H9F3 1711 aa12.54□□□□□ -0.4
MCM3-207ENST00000616552 EHBP1L1Q8N3D4 1523 aa12.53□□□□□ -0.4
MCM3-207ENST00000616552 ABCA10Q8WWZ4 1543 aa12.53□□□□□ -0.4
MCM3-207ENST00000616552 PKD2Q13563 968 aa12.52□□□□□ -0.41
MCM3-207ENST00000616552 RPRD2Q5VT52 1461 aaKnown RBP12.52□□□□□ -0.41
MCM3-207ENST00000616552 CDK13Q14004 1512 aaKnown RBP12.52□□□□□ -0.41
MCM3-207ENST00000616552 PPM1GO15355 546 aaPredicted RBP12.5□□□□□ -0.41
MCM3-207ENST00000616552 EIF4G3O43432 1585 aaKnown RBP12.5□□□□□ -0.41
MCM3-207ENST00000616552 UGGT2Q9NYU1 1516 aa12.5□□□□□ -0.41
MCM3-207ENST00000616552 GRIN2BQ13224 1484 aa12.49□□□□□ -0.41
MCM3-207ENST00000616552 USP35Q9P2H5 1018 aa12.49□□□□□ -0.41
MCM3-207ENST00000616552 DAXXQ9UER7 740 aaPredicted RBP12.48□□□□□ -0.41
MCM3-207ENST00000616552 GAPVD1Q14C86 1478 aa12.47□□□□□ -0.41
MCM3-207ENST00000616552 RGL3Q3MIN7 710 aa12.47□□□□□ -0.41
MCM3-207ENST00000616552 MYBBP1AQ9BQG0 1328 aaKnown RBP12.46□□□□□ -0.41
MCM3-207ENST00000616552 UBE2Q2Q8WVN8 375 aa12.45□□□□□ -0.42
MCM3-207ENST00000616552 POGKQ9P215 609 aa12.45□□□□□ -0.42
MCM3-207ENST00000616552 LRPPRCP42704 1394 aaKnown RBP12.44□□□□□ -0.42
MCM3-207ENST00000616552 SLKQ9H2G2 1235 aaPredicted RBP12.44□□□□□ -0.42
MCM3-207ENST00000616552 SENP3Q9H4L4 574 aaPredicted RBP12.44□□□□□ -0.42
MCM3-207ENST00000616552 NBPF1Q3BBV0 1214 aa12.44□□□□□ -0.42
MCM3-207ENST00000616552 C8orf34Q49A92 452 aa12.43□□□□□ -0.42
MCM3-207ENST00000616552 ABCC5O15440 1437 aa12.43□□□□□ -0.42
MCM3-207ENST00000616552 MS4A1P11836 297 aa12.43□□□□□ -0.42
MCM3-207ENST00000616552 SPRYD3Q8NCJ5 442 aa12.43□□□□□ -0.42
MCM3-207ENST00000616552 FBLN2P98095 1184 aa12.43□□□□□ -0.42
MCM3-207ENST00000616552 SEC24BO95487 1268 aa12.42□□□□□ -0.42
MCM3-207ENST00000616552 KIF15Q9NS87 1388 aa12.42□□□□□ -0.42
MCM3-207ENST00000616552 DAPK1P53355 1430 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms